WERAM Information

Tag Content
WERAM ID WERAM-Brr-0015
Ensembl Protein ID Bra003689.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra003689 Bra003689.1 Bra003689.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.40e-25 90.2 209 412
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    +C +Cg++ + ++ ++ Cd+C+d +H++C ++  + ++ g swyC +C++
  Bra003689.1-P 209 TCKLCGEKAAVTD-CLACDHCEDMYHVSCAHPGGKGMSTG-SWYCINCTA 256
                    7****87777766.**************************.*******85 PP
        PHD.txt   3 iClvCgkddeg 13 
                     C+vC++ +++
  Bra003689.1-P 265 NCVVCERMKTD 275
                    46777433333 PP
        PHD.txt   2 tiClvCg.kddegekemvqCde..Cd.dwfHlkCvklplsslpegkswyCpsC 50 
                    ++C++Cg k+ e+   ++ Cd+  C+ + +H++C++ +l +l+ g+ wyC sC
  Bra003689.1-P 314 ELCRTCGtKVVENG-RFITCDHpfCPhKYYHIRCLTAKLVKLHGGARWYCSSC 365
                    58****63666665.5*********9899**************9989****** PP
        PHD.txt   4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    C+ C +d++++k +v Cd+Cdd++H++C+k+p+ s+p++ +w+C++C 
  Bra003689.1-P 367 CRNCLTDKDDDK-IVMCDGCDDAYHIYCMKPPRASVPDE-EWFCKTCN 412
                    ****77666666.************************99.9******7 PP
Protein Sequence
(Fasta)		MTSNGEGTEK CNGVNSCGGG ANERSRGNKK LQVYKRRKLG RRSVSGSKCK EDERVSVEAG 60
VSHSGSQESV ASELDNQTGE LPELPNPNKP TTEPKYETVT AGCQNVLSQV LASKEFASLS 120
KLLSEVKIED LTCRTLIDTR MQEGVYEGSP KLFSTDLQED VGNDMAVLGN SLLELSKTFS 180
TEQLKKFYTR ELKPNPNAEN IRNNCVYDTC KLCGEKAAVT DCLACDHCED MYHVSCAHPG 240
GKGMSTGSWY CINCTANGIG SPHENCVVCE RMKTDSRRVD KSTECKEDSN ESEENSSCNI 300
NHGGHKVEVK RDSELCRTCG TKVVENGRFI TCDHPFCPHK YYHIRCLTAK LVKLHGGARW 360
YCSSCLCRNC LTDKDDDKIV MCDGCDDAYH IYCMKPPRAS VPDEEWFCKT CNAASQKVRK 420
VRKAYEKKMG TLQKQNGNLK SSGDSVGGGV DMLLNAADTL KD 462
Nucleotide Sequence
(Fasta)		ATGACAAGCA ATGGTGAAGG TACAGAGAAG TGTAATGGAG TTAATAGTTG TGGTGGTGGT 60
GCTAATGAAA GGTCCAGAGG TAACAAGAAG TTACAAGTGT ACAAGCGGAG AAAGCTTGGA 120
AGAAGATCGG TTTCTGGGAG TAAGTGTAAA GAAGATGAGA GGGTTTCTGT GGAAGCAGGT 180
GTTAGTCACT CAGGAAGCCA GGAGTCTGTT GCTTCTGAAT TAGATAATCA AACTGGTGAA 240
CTCCCTGAGC TTCCAAATCC AAATAAACCA ACAACTGAAC CCAAGTATGA GACCGTGACG 300
GCCGGATGCC AGAATGTTCT GTCTCAAGTT TTAGCTTCAA AGGAGTTTGC ATCTCTAAGT 360
AAGTTGCTTT CTGAAGTCAA GATTGAAGAC CTTACCTGCA GAACTCTCAT AGACACCAGG 420
ATGCAAGAGG GTGTTTATGA AGGTTCACCT AAGCTCTTTT CAACCGATCT CCAAGAGGAT 480
GTTGGTAATG ATATGGCTGT TCTTGGTAAT AGCCTTTTAG AGCTTTCAAA GACGTTTTCT 540
ACCGAACAGT TGAAGAAGTT CTACACTAGG GAATTGAAGC CTAATCCTAA TGCAGAGAAC 600
ATCAGAAATA ACTGTGTTTA TGACACTTGC AAGCTATGTG GAGAGAAGGC AGCAGTGACA 660
GACTGTTTAG CTTGTGATCA TTGCGAAGAT ATGTACCATG TCTCATGTGC ACATCCAGGT 720
GGGAAAGGGA TGTCTACGGG AAGTTGGTAC TGTATAAACT GCACAGCTAA TGGAATCGGA 780
TCACCTCACG AGAATTGCGT AGTGTGTGAA AGAATGAAGA CAGATAGCAG ACGTGTTGAT 840
AAAAGTACAG AATGTAAAGA AGATTCAAAC GAATCTGAAG AGAACTCAAG CTGCAACATC 900
AACCATGGAG GTCACAAAGT AGAGGTGAAG AGAGATTCTG AACTCTGTAG GACATGTGGA 960
ACAAAAGTGG TGGAGAATGG CAGGTTCATA ACATGTGATC ACCCTTTTTG CCCACACAAG 1020
TATTACCACA TCAGGTGTTT GACTGCAAAG CTAGTAAAAC TACACGGTGG TGCTCGTTGG 1080
TATTGCTCAT CTTGCCTATG CAGAAACTGT CTAACCGACA AGGATGATGA TAAGATTGTG 1140
ATGTGTGATG GGTGTGATGA TGCGTATCAC ATATACTGCA TGAAACCTCC ACGTGCATCG 1200
GTTCCAGATG AAGAATGGTT TTGCAAAACT TGTAACGCTG CAAGTCAGAA AGTCCGTAAA 1260
GTGAGAAAGG CTTATGAGAA GAAGATGGGG ACGTTGCAGA AACAAAATGG GAATCTGAAG 1320
AGCAGTGGAG ATAGTGTAGG AGGAGGAGTG GACATGCTTC TAAACGCAGC TGACACTCTG 1380
AAAGATTAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0111 Bo6g083390.1 Brassica oleracea 88 0.0 797
WERAM-Arl-0020 fgenesh1_pg.C_scaffold_2001986 Arabidopsis lyrata 67 3e-171 598
WERAM-Art-0031 AT1G77250.1 Arabidopsis thaliana 67 7e-165 577
WERAM-Thc-0098 EOY16466 Theobroma cacao 44 2e-80 297
WERAM-Pot-0068 POPTR_0005s20620.1 Populus trichocarpa 40 2e-79 293
WERAM-Prp-0045 EMJ26345 Prunus persica 45 7e-79 291
WERAM-Sol-0066 Solyc04g058190.2.1 Solanum lycopersicum 40 4e-72 269
WERAM-Viv-0110 VIT_18s0001g01580.t01 Vitis vinifera 38 5e-72 269
WERAM-Glm-0157 GLYMA13G09495.1 Glycine max 41 1e-71 268
WERAM-Met-0070 KEH35359 Medicago truncatula 39 2e-67 254
WERAM-Mua-0027 GSMUA_Achr11P18730_001 Musa acuminata 35 4e-52 202
WERAM-Tra-0124 Traes_3DL_9A4F03809.2 Triticum aestivum 32 8e-46 182
WERAM-Sei-0003 Si000106m Setaria italica 33 9e-46 182
WERAM-Zem-0045 GRMZM2G059266_P01 Zea mays 33 3e-45 180
WERAM-Orp-0081 OPUNC08G00430.1 Oryza punctata 32 5e-44 176
WERAM-Orm-0080 OMERI08G00680.1 Oryza meridionalis 30 7e-44 175
WERAM-Orgl-0082 OGLUM08G00440.1 Oryza glumaepatula 30 1e-43 174
WERAM-Orni-0083 ONIVA08G00360.1 Oryza nivara 31 1e-43 174
WERAM-Sob-0046 Sb03g025310.1 Sorghum bicolor 32 2e-43 174
WERAM-Ors-0076 OS08T0105000-01 Oryza sativa 30 2e-43 174
WERAM-Orr-0088 ORUFI08G00420.1 Oryza rufipogon 30 2e-43 174
WERAM-Ori-0094 BGIOSGA027795-PA Oryza indica 30 2e-43 174
WERAM-Aet-0023 EMT29753 Aegilops tauschii 30 2e-43 173
WERAM-Orbr-0006 OB01G28790.1 Oryza brachyantha 31 3e-43 173
WERAM-Orl-0066 KN539407.1_FGP010 Oryza longistaminata 30 6e-43 172
WERAM-Orb-0085 OBART08G00380.1 Oryza barthii 30 6e-43 172
WERAM-Tru-0034 TRIUR3_17458-P1 Triticum urartu 30 8e-43 172
WERAM-Lep-0006 LPERR01G16460.1 Leersia perrieri 31 3e-42 170
WERAM-Brd-0051 BRADI2G40700.1 Brachypodium distachyon 32 3e-42 170
WERAM-Hov-0006 MLOC_11639.4 Hordeum vulgare 29 2e-41 167
WERAM-Sot-0052 PGSC0003DMT400046397 Solanum tuberosum 45 2e-39 160
WERAM-Amt-0050 ERN13236 Amborella trichopoda 31 5e-38 156
WERAM-Org-0006 ORGLA01G0155400.1 Oryza glaberrima 32 1e-32 138
WERAM-Orn-0120 ENSONIP00000012272.1 Oreochromis niloticus 33 9e-13 72.4
WERAM-Mum-0185 ENSMUSP00000135941.2 Mus musculus 39 1e-12 72.0
WERAM-Ran-0263 ENSRNOP00000069442.1 Rattus norvegicus 39 5e-12 70.1
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 34 5e-12 70.1
WERAM-Sus-0005 ENSSSCP00000000202.2 Sus scrofa 32 6e-12 69.7
WERAM-Mam-0144 ENSMMUP00000020643.2 Macaca mulatta 32 6e-12 69.7
WERAM-Tut-0057 ENSTTRP00000004493.1 Tursiops truncatus 32 7e-12 69.7
WERAM-Ere-0007 ENSEEUP00000000305.1 Erinaceus europaeus 51 7e-12 69.7
WERAM-Pof-0064 ENSPFOP00000005925.2 Poecilia formosa 34 7e-12 69.3
WERAM-Otg-0078 ENSOGAP00000005885.2 Otolemur garnettii 33 7e-12 69.3
WERAM-Caj-0209 ENSCJAP00000036628.3 Callithrix jacchus 33 7e-12 69.3
WERAM-Ptv-0040 ENSPVAP00000004387.1 Pteropus vampyrus 32 8e-12 69.3
WERAM-Prc-0037 ENSPCAP00000003628.1 Procavia capensis 32 8e-12 69.3
WERAM-Php-0045 PP1S200_118V6.1 Physcomitrella patens 39 9e-12 68.9
WERAM-Orc-0058 ENSOCUP00000005384.2 Oryctolagus cuniculus 32 9e-12 68.9
WERAM-Hos-0186 ENSP00000301067.7 Homo sapiens 33 9e-12 68.9
WERAM-Xim-0135 ENSXMAP00000011152.1 Xiphophorus maculatus 33 9e-12 68.9
WERAM-Loa-0099 ENSLAFP00000008377.4 Loxodonta africana 32 1e-11 68.9
WERAM-Gam-0044 ENSGMOP00000004922.1 Gadus morhua 34 1e-11 68.9
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 33 1e-11 68.9
WERAM-Aim-0081 ENSAMEP00000007326.1 Ailuropoda melanoleuca 37 1e-11 68.6
WERAM-Fec-0002 ENSFCAP00000000087.3 Felis catus 37 1e-11 68.6
WERAM-Caf-0097 ENSCAFP00000012833.4 Canis familiaris 37 1e-11 68.6
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 37 1e-11 68.6
WERAM-Paa-0006 ENSPANP00000012073.1 Papio anubis 37 1e-11 68.6
WERAM-Pat-0041 ENSPTRP00000041051.3 Pan troglodytes 37 1e-11 68.6
WERAM-Myl-0127 ENSMLUP00000010258.2 Myotis lucifugus 37 1e-11 68.6
WERAM-Mup-0167 ENSMPUP00000014520.1 Mustela putorius furo 37 1e-11 68.6
WERAM-Gog-0092 ENSGGOP00000007801.2 Gorilla gorilla 37 1e-11 68.6
WERAM-Asm-0140 ENSAMXP00000013406.1 Astyanax mexicanus 35 1e-11 68.6
WERAM-Ova-0206 ENSOARP00000020382.1 Ovis aries 37 1e-11 68.6
WERAM-Ocp-0133 ENSOPRP00000014011.2 Ochotona princeps 32 1e-11 68.6
WERAM-Mae-0078 ENSMEUP00000007759.1 Macropus eugenii 41 1e-11 68.6
WERAM-Cap-0033 ENSCPOP00000002700.2 Cavia porcellus 32 1e-11 68.6
WERAM-Fia-0003 ENSFALP00000000206.1 Ficedula albicollis 33 1e-11 68.6
WERAM-Bot-0131 ENSBTAP00000019193.5 Bos taurus 37 1e-11 68.6
WERAM-Nol-0193 ENSNLEP00000021682.1 Nomascus leucogenys 37 1e-11 68.6
WERAM-Ict-0043 ENSSTOP00000003541.2 Ictidomys tridecemlineatus 32 1e-11 68.6
WERAM-Chs-0070 ENSCSAP00000002475.1 Chlorocebus sabaeus 37 1e-11 68.6
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 34 1e-11 68.2
WERAM-Mim-0155 ENSMICP00000015981.1 Microcebus murinus 37 1e-11 68.2
WERAM-Orla-0074 ENSORLP00000009504.1 Oryzias latipes 36 2e-11 68.2
WERAM-Sah-0035 ENSSHAP00000004216.1 Sarcophilus harrisii 32 2e-11 68.2
WERAM-Dar-0173 ENSDARP00000122949.2 Danio rerio 36 2e-11 68.2
WERAM-Mod-0077 ENSMODP00000012203.3 Monodelphis domestica 41 2e-11 67.8
WERAM-Eqc-0209 ENSECAP00000022585.1 Equus caballus 41 3e-11 67.4
WERAM-Gaa-0092 ENSGACP00000011950.1 Gasterosteus aculeatus 35 3e-11 67.4
WERAM-Ora-0001 ENSOANP00000000271.1 Ornithorhynchus anatinus 33 3e-11 67.4
WERAM-Dio-0006 ENSDORP00000000973.1 Dipodomys ordii 41 3e-11 67.4
WERAM-Vip-0044 ENSVPAP00000003974.1 Vicugna pacos 41 4e-11 67.0
WERAM-Tar-0124 ENSTRUP00000026014.1 Takifugu rubripes 50 4e-11 67.0
WERAM-Leo-0073 ENSLOCP00000009304.1 Lepisosteus oculatus 32 4e-11 67.0
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 38 6e-11 66.2
WERAM-Pes-0173 ENSPSIP00000020141.1 Pelodiscus sinensis 53 6e-11 66.2
WERAM-Crn-0020 AAW43237 Cryptococcus neoformans 52 7e-11 66.2
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 40 8e-11 65.9
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 40 8e-11 65.9
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 40 9e-11 65.9
WERAM-Ten-0117 ENSTNIP00000012968.1 Tetraodon nigroviridis 48 9e-11 65.9
WERAM-Ect-0018 ENSETEP00000001138.1 Echinops telfairi 31 1e-10 65.5
WERAM-Chh-0008 ENSCHOP00000000593.1 Choloepus hoffmanni 38 1e-10 65.5
WERAM-Drm-0048 FBpp0085418 Drosophila melanogaster 38 1e-10 65.1
WERAM-Tas-0126 ENSTSYP00000013377.1 Tarsius syrichta 33 2e-10 64.7
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 35 2e-10 64.7
Created Date 25-Jun-2016