WERAM Information

Tag Content
WERAM ID WERAM-Brr-0003
Ensembl Protein ID Bra000729.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra000729 Bra000729.1 Bra000729.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.20e-08 36 167 202
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt  15 kemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                    ++ + Cd+Cd+w+H+ Cv++ l+ ++e+  w+Cp+C 
  Bra000729.1-P 167 DTSIACDSCDTWYHAVCVGFDLEIASED-TWVCPRCL 202
                    3479*****************8888899.*******6 PP
Protein Sequence
(Fasta)		MELDFDAGNL LEDEAGEVGH NDMAGFEGER CGICMDIIVD RGLLDCCQHW FCFECIDNWS 60
SIMNLCPLCQ REFQLITCVP VNDFGESSKV DEVSLSGYSF HASLFLAEEL YFPQRSNWDE 120
DWCVEEDTDA LSSPSHYIDE NAVICLDGDL CKIRNTFNYI GGDSNLDTSI ACDSCDTWYH 180
AVCVGFDLEI ASEDTWVCPR CLSSEKPFES DASPMETTKP PAIPESTNSG CSVEAIYSGN 240
FSVTVADDGE TALVVSTVKG DEWPMKPSDT NASLVQAMVY GDPNNSGRKE NTEQVPGKSE 300
LMQSLPHQLS SELPLESNQP LFAAQMEIRA DSQYALSLVA SGRDIFAFCA TVDPVIGLEE 360
KECLPVNVEK SLSSTAFSNS DVASVVSLKR KHSDCSGNDD NSKIKAEIAE RLVKPKLEEM 420
EEKAAIRHES RSPSNNTTVD IFSIVKGFGS KKKPALPNTT DKSSEGENAV GLRVKKIKKT 480
PEDDKESLVL VEKLRKEIRE AVRNKSMEDI RKDQFDPKLL AAFRAAVAGS KTDEAPRKIP 540
ALALKAKKLM LQKGKVRENL TKKIYADTNG KRKSAWHRDC EVEFWKHRCM KAGKPEKIET 600
LKSVLSLLKK NPADTEKNVS SEAPQASNPI LSRLYLADTS VFPRNHDIKP LVGSKETGLD 660
KTLPKSSDVK GNNSNAAGSK INSGSKPPIF ENPDELKKDK RKWALQVLAR KKALAGSNSS 720
EDKEGSPELK GNYPLLAQLP ADMRPNLATS RHNKVPVAVR QAQLYRLTEH LLKKENLLEV 780
RRSAATELAV ADAINIEKVI ADKSSSKVVY LNLCSQEILH HSESKAMDTN AVEPTTSPPL 840
SNNGTEHVDD KDSDDVAVLQ ALRAAGLVDS PPNSPNRSSE VPPDKEDGAL DKAKEVGPDS 900
VLDIGSVPDT DIFGDFEYEL DDEDYIGATK ATKAAETQQD EGLTKVKVVL STVQPEKVLN 960
QSEVLGNEET TINQEGTTNG EEDGKSFVPM EPVPEAEAEA EGEGEGGEIL SLAECEELYG 1020
PGTEKLVEKP LTEGSADNGL QAKAPDSECE SNTHREFMAS NFEKTSIQEK KLPTRIPNCN 1080
PSEKPSKEEK SKADGFSDSI IKKVEAYIKE HIRPLCKSGV INVDQYRWAV TKTREKVMKY 1140
HSKAKSANFL IKEGDKIKKL AEQYVETAAS SSTGAHHKEK DKCK 1184
Nucleotide Sequence
(Fasta)		ATGGAGCTCG ATTTCGACGC TGGGAACTTG CTTGAAGACG AAGCTGGTGA AGTTGGTCAT 60
AATGATATGG CTGGATTTGA AGGGGAAAGG TGTGGGATTT GCATGGACAT CATTGTTGAT 120
AGAGGCCTTC TTGATTGTTG TCAGCACTGG TTCTGCTTTG AATGCATTGA TAATTGGTCT 180
TCGATTATGA ACCTCTGCCC TCTCTGTCAG AGAGAGTTTC AGCTGATTAC ATGTGTCCCT 240
GTGAATGATT TTGGGGAAAG CAGCAAGGTT GATGAGGTTT CGCTATCTGG GTACTCTTTT 300
CATGCTTCTC TTTTCCTCGC TGAAGAGCTT TACTTTCCTC AACGATCTAA CTGGGATGAA 360
GATTGGTGCG TTGAAGAGGA CACTGACGCC CTCTCTTCTC CGTCACACTA CATTGACGAA 420
AATGCAGTTA TCTGTTTAGA TGGAGATCTC TGCAAGATCC GTAACACCTT CAATTACATT 480
GGAGGGGATT CTAACCTCGA TACATCAATT GCTTGTGATT CTTGTGACAC ATGGTATCAT 540
GCTGTTTGTG TGGGTTTTGA TCTGGAAATC GCATCAGAGG ATACATGGGT ATGTCCGAGG 600
TGTCTCTCAA GTGAAAAACC ATTCGAATCT GATGCTTCAC CAATGGAGAC AACAAAGCCC 660
CCGGCGATTC CTGAAAGCAC TAATAGCGGA TGCTCAGTCG AGGCAATTTA TTCTGGAAAT 720
TTTTCAGTCA CAGTTGCTGA TGATGGCGAG ACAGCTCTTG TCGTGTCAAC AGTCAAAGGA 780
GACGAGTGGC CTATGAAACC AAGTGATACC AATGCATCGT TAGTTCAAGC TATGGTGTAC 840
GGAGATCCTA ATAACTCGGG TAGGAAGGAA AATACAGAGC AAGTCCCTGG AAAATCGGAG 900
CTCATGCAGT CCTTACCACA TCAATTATCA TCTGAATTAC CACTTGAGTC AAATCAGCCG 960
TTGTTTGCTG CACAGATGGA GATTAGAGCA GATTCTCAAT ATGCTTTGTC CCTTGTTGCT 1020
TCTGGGCGTG ATATTTTTGC GTTCTGTGCA ACTGTAGACC CTGTTATAGG ACTTGAAGAA 1080
AAGGAGTGTC TACCGGTCAA TGTTGAGAAA TCTCTTTCTA GTACAGCCTT TTCCAACTCA 1140
GATGTTGCTA GTGTTGTCAG CTTAAAGAGA AAACATTCAG ATTGCAGTGG TAATGATGAC 1200
AATTCGAAAA TCAAGGCAGA GATTGCAGAA CGTCTCGTTA AACCAAAGCT AGAGGAAATG 1260
GAAGAAAAAG CTGCCATTCG GCACGAGAGC AGATCCCCTT CAAACAATAC AACTGTTGAT 1320
ATATTCAGCA TTGTTAAAGG ATTTGGGAGT AAAAAGAAAC CCGCGCTTCC AAATACTACA 1380
GATAAGTCTT CAGAAGGAGA GAATGCTGTT GGTTTGAGGG TAAAGAAGAT TAAGAAGACA 1440
CCGGAAGATG ATAAAGAGTC ATTGGTTTTG GTTGAGAAAC TAAGGAAAGA AATAAGAGAG 1500
GCCGTTCGTA ACAAATCAAT GGAAGACATC AGAAAAGACC AGTTTGATCC AAAACTCTTG 1560
GCTGCCTTCA GAGCTGCTGT GGCAGGATCG AAAACGGATG AAGCACCTAG AAAAATTCCG 1620
GCTCTGGCAC TGAAGGCAAA GAAATTGATG CTGCAGAAAG GAAAAGTCCG AGAGAATCTC 1680
ACTAAGAAAA TTTATGCAGA TACAAATGGG AAGCGGAAAA GTGCATGGCA TCGGGACTGT 1740
GAAGTTGAGT TCTGGAAGCA TCGGTGCATG AAAGCTGGAA AGCCTGAGAA AATTGAGACT 1800
CTGAAGTCTG TTCTTAGCCT CTTGAAGAAA AATCCAGCTG ACACCGAGAA AAATGTTTCA 1860
TCTGAAGCCC CACAGGCTTC AAATCCTATT CTCTCCAGAT TATATTTGGC AGATACCTCT 1920
GTGTTCCCGA GAAATCATGA TATCAAACCT CTTGTGGGAT CGAAAGAAAC AGGACTGGAC 1980
AAGACCTTAC CAAAGAGCAG TGATGTCAAA GGGAACAACT CAAATGCTGC TGGATCAAAA 2040
ATAAACTCGG GAAGCAAACC GCCTATTTTT GAGAATCCAG ATGAGCTGAA GAAAGACAAA 2100
AGGAAATGGG CATTGCAGGT TCTTGCAAGA AAGAAAGCTT TAGCAGGCAG CAACTCAAGC 2160
GAAGACAAAG AAGGCTCTCC TGAGCTCAAA GGGAATTATC CATTGTTGGC TCAACTTCCA 2220
GCTGATATGA GGCCAAACCT TGCGACCAGT CGCCATAATA AAGTTCCTGT TGCAGTTAGG 2280
CAGGCACAAT TATACCGGCT GACAGAACAT TTATTGAAGA AAGAAAATCT TCTGGAAGTT 2340
CGAAGAAGTG CAGCAACAGA ACTAGCCGTT GCAGATGCTA TAAATATCGA GAAAGTGATC 2400
GCTGACAAAT CAAGTAGCAA GGTTGTGTAT CTGAATCTAT GCTCACAAGA AATACTGCAC 2460
CATTCAGAGA GCAAAGCGAT GGACACTAAT GCCGTAGAAC CAACTACTTC ACCACCACTG 2520
TCTAATAACG GAACCGAACA TGTTGATGAC AAAGATTCAG ATGATGTAGC CGTTCTTCAA 2580
GCGCTCAGAG CAGCTGGTCT TGTTGATTCA CCACCAAACA GCCCAAACCG TTCATCAGAA 2640
GTTCCTCCAG ATAAAGAAGA CGGTGCTTTG GACAAAGCTA AGGAGGTAGG CCCAGATAGT 2700
GTACTGGACA TTGGTTCAGT TCCTGATACA GACATCTTTG GGGATTTTGA GTATGAGTTA 2760
GATGACGAAG ACTATATTGG TGCTACCAAG GCTACAAAAG CTGCAGAAAC ACAGCAGGAT 2820
GAAGGTTTGA CTAAGGTGAA GGTAGTTTTA TCCACTGTTC AACCTGAGAA AGTTCTAAAT 2880
CAATCTGAGG TCTTGGGGAA TGAAGAAACA ACAATAAACC AGGAAGGGAC AACAAATGGT 2940
GAAGAAGATG GGAAGAGCTT TGTTCCTATG GAGCCTGTAC CTGAAGCTGA GGCTGAGGCA 3000
GAGGGAGAAG GAGAGGGAGG TGAGATCCTT TCTTTAGCTG AATGTGAAGA ACTGTACGGA 3060
CCTGGGACAG AGAAACTAGT TGAGAAACCT CTCACTGAAG GATCTGCTGA TAACGGCCTT 3120
CAAGCGAAAG CACCTGATTC AGAGTGCGAG AGCAACACGC ACAGAGAGTT CATGGCTTCA 3180
AACTTCGAGA AGACTTCCAT TCAAGAGAAG AAACTTCCCA CAAGGATCCC AAACTGTAAT 3240
CCAAGCGAGA AGCCGTCTAA AGAAGAGAAA AGCAAAGCTG ATGGGTTCAG TGACTCCATC 3300
ATCAAGAAGG TTGAAGCATA CATCAAAGAA CATATCAGAC CACTGTGTAA GAGCGGAGTG 3360
ATAAACGTGG ATCAATACAG ATGGGCAGTG ACGAAAACCA GAGAGAAAGT GATGAAGTAT 3420
CACAGCAAAG CCAAGAGTGC TAACTTCTTG ATCAAGGAAG GCGACAAGAT TAAGAAACTC 3480
GCCGAGCAAT ATGTTGAAAC CGCCGCTTCT TCTTCCACCG GAGCTCACCA CAAGGAGAAG 3540
GACAAGTGCA AGTGA 3556
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Bro-0049 Bo3g045020.1 Brassica oleracea 93 0.0 2130
WERAM-Viv-0008 VIT_02s0025g01650.t01 Vitis vinifera 43 0.0 848
WERAM-Glm-0087 GLYMA08G02761.1 Glycine max 42 0.0 836
WERAM-Met-0184 KEH21243 Medicago truncatula 41 0.0 800
WERAM-Sol-0142 Solyc12g055910.1.1 Solanum lycopersicum 41 0.0 764
WERAM-Thc-0042 EOY25059 Theobroma cacao 45 6e-176 616
WERAM-Amt-0027 ERN14104 Amborella trichopoda 40 5e-126 450
WERAM-Orp-0111 OPUNC12G05750.1 Oryza punctata 38 9e-121 432
WERAM-Orgl-0116 OGLUM12G07230.1 Oryza glumaepatula 39 6e-118 423
WERAM-Orm-0001 OMERI01G05310.1 Oryza meridionalis 38 1e-117 422
WERAM-Arl-0036 fgenesh1_pm.C_scaffold_6002470 Arabidopsis lyrata 77 1e-91 335
WERAM-Orni-0119 ONIVA12G05730.1 Oryza nivara 43 3e-91 334
WERAM-Orb-0121 OBART12G06020.1 Oryza barthii 43 1e-90 332
WERAM-Tra-0106 Traes_3AL_5990F914F.1 Triticum aestivum 41 1e-89 329
WERAM-Aet-0044 EMT26280 Aegilops tauschii 41 3e-89 328
WERAM-Lep-0011 LPERR01G24950.1 Leersia perrieri 42 1e-88 326
WERAM-Hov-0007 MLOC_11701.2 Hordeum vulgare 41 2e-86 318
WERAM-Orbr-0011 OB01G38060.1 Oryza brachyantha 41 5e-86 317
WERAM-Zem-0128 GRMZM2G391413_P01 Zea mays 41 2e-85 315
WERAM-Tru-0102 TRIUR3_35412-P1 Triticum urartu 41 3e-85 314
WERAM-Art-0097 AT4G10940.1 Arabidopsis thaliana 73 4e-85 314
WERAM-Mua-0065 GSMUA_Achr3P31620_001 Musa acuminata 46 5e-85 313
WERAM-Php-0043 PP1S195_13V6.1 Physcomitrella patens 40 2e-41 169
WERAM-Orr-0033 ORUFI03G14970.1 Oryza rufipogon 33 8e-17 87.4
WERAM-Ors-0029 OS03T0302200-01 Oryza sativa 33 8e-17 87.4
WERAM-Brd-0005 BRADI1G16820.1 Brachypodium distachyon 32 1e-16 87.0
WERAM-Org-0033 ORGLA03G0138300.1 Oryza glaberrima 33 1e-16 87.0
WERAM-Ori-0040 BGIOSGA012447-PA Oryza indica 33 1e-16 87.0
WERAM-Orl-0025 KN538743.1_FGP047 Oryza longistaminata 33 1e-16 86.7
WERAM-Sei-0129 Si034380m Setaria italica 33 2e-15 82.8
WERAM-Pot-0057 POPTR_0005s02090.1 Populus trichocarpa 32 9e-14 77.4
WERAM-Prp-0033 EMJ09913 Prunus persica 32 8e-13 73.9
WERAM-Sot-0077 PGSC0003DMT400063610 Solanum tuberosum 30 4e-10 65.1
WERAM-Osl-0017 ABO99782 Ostreococcus lucimarinus 27 4e-09 62.0
WERAM-Drm-0059 FBpp0078401 Drosophila melanogaster 25 2e-08 59.7
WERAM-Sem-0071 EFJ32280 Selaginella moellendorffii 50 2e-08 59.7
WERAM-Sob-0132 Sb10g010430.1 Sorghum bicolor 46 3e-08 58.9
WERAM-Crn-0026 AAW44599 Cryptococcus neoformans 34 4e-06 52.0
Created Date 25-Jun-2016