WERAM Information

Tag Content
WERAM ID WERAM-Arl-0036
Ensembl Protein ID fgenesh1_pm.C_scaffold_6002470
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
fgenesh1_pm.C_scaffold_6002470 fgenesh1_pm.C_scaffold_6002470 fgenesh1_pm.C_scaffold_6002470
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 9.00e-09 36.1 65 185
Organism Arabidopsis lyrata
Domain Profile
  Me_Reader PHD
                         PHD.txt  3 iClvCgkddegekemv 18
                                    +C++C +++++   ++
  fgenesh1_pm.C_scaffold_6002470 65 LCPLC-QREFQ---LI 76
                                    68888.55554...45 PP
                         PHD.txt  15 kemvqCdeCddwfHlkCvklplsslpegkswyCps 49 
                                     ++ + Cd+Cd+w+H+ Cv++  ++++e+  w+Cps
  fgenesh1_pm.C_scaffold_6002470 152 DTSIACDSCDTWYHAICVGFDVENASED-TWVCPS 185
                                     33899****************9999999.****97 PP
Protein Sequence
(Fasta)		MELDFDVSNL VEDEAAEVEH NDMAGIEGER CGICMDIIID RGVLDCCQHW FCFECIDNWS 60
TIMNLCPLCQ REFQLITCVP VYDSGESSKV DEVSLSGDED CCIEEETDAV SSPSHYIDET 120
HYIDENAVIC LDGDLCKLRN TFSYIGGDSN LDTSIACDSC DTWYHAICVG FDVENASEDT 180
WVCPSIDTLY QI 192
Nucleotide Sequence
(Fasta)		ATGGAGCTCG ATTTTGACGT TAGTAACTTG GTTGAAGATG AAGCTGCTGA AGTTGAACAT 60
AATGACATGG CTGGAATTGA AGGGGAAAGA TGTGGGATTT GCATGGATAT AATTATTGAT 120
AGAGGCGTTC TTGATTGCTG TCAGCACTGG TTCTGCTTTG AATGCATTGA TAATTGGTCT 180
ACGATTATGA ACCTCTGCCC TCTCTGTCAG AGAGAGTTTC AGTTGATTAC ATGTGTCCCT 240
GTGTATGATT CAGGTGAAAG CAGCAAGGTT GATGAGGTTT CGTTATCAGG AGATGAAGAT 300
TGCTGCATTG AAGAGGAGAC TGATGCCGTC TCTTCTCCGT CACACTATAT TGACGAAACA 360
CACTATATTG ATGAAAATGC AGTTATCTGT TTAGATGGCG ATCTTTGCAA GCTCCGTAAC 420
ACTTTCAGTT ACATTGGAGG GGATTCCAAC CTTGATACAT CAATTGCTTG TGATTCGTGT 480
GATACGTGGT ATCATGCTAT TTGCGTGGGT TTTGACGTAG AAAATGCATC AGAGGATACA 540
TGGGTATGTC CGAGTATAGA CACTTTGTAC CAAATCTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0097 AT4G10940.1 Arabidopsis thaliana 91 9e-99 356
WERAM-Bro-0049 Bo3g045020.1 Brassica oleracea 85 1e-95 345
WERAM-Brr-0003 Bra000729.1-P Brassica rapa 77 5e-93 337
WERAM-Viv-0008 VIT_02s0025g01650.t01 Vitis vinifera 65 5e-70 260
WERAM-Thc-0042 EOY25059 Theobroma cacao 63 2e-67 252
WERAM-Glm-0087 GLYMA08G02761.1 Glycine max 64 2e-65 245
WERAM-Met-0184 KEH21243 Medicago truncatula 62 4e-62 234
WERAM-Sol-0142 Solyc12g055910.1.1 Solanum lycopersicum 66 6e-62 233
WERAM-Lep-0011 LPERR01G24950.1 Leersia perrieri 54 5e-55 211
WERAM-Amt-0027 ERN14104 Amborella trichopoda 63 1e-54 209
WERAM-Orm-0001 OMERI01G05310.1 Oryza meridionalis 51 2e-54 208
WERAM-Orbr-0011 OB01G38060.1 Oryza brachyantha 60 1e-53 206
WERAM-Orni-0119 ONIVA12G05730.1 Oryza nivara 58 2e-53 205
WERAM-Orb-0121 OBART12G06020.1 Oryza barthii 58 3e-53 204
WERAM-Zem-0128 GRMZM2G391413_P01 Zea mays 57 5e-52 201
WERAM-Tra-0118 Traes_3DL_155F0E08C.1 Triticum aestivum 51 1e-48 189
WERAM-Aet-0044 EMT26280 Aegilops tauschii 51 1e-48 189
WERAM-Tru-0102 TRIUR3_35412-P1 Triticum urartu 57 3e-48 188
WERAM-Hov-0007 MLOC_11701.2 Hordeum vulgare 58 8e-47 183
WERAM-Mua-0065 GSMUA_Achr3P31620_001 Musa acuminata 45 2e-43 172
WERAM-Php-0043 PP1S195_13V6.1 Physcomitrella patens 42 7e-33 137
WERAM-Orp-0111 OPUNC12G05750.1 Oryza punctata 51 6e-25 110
WERAM-Orgl-0116 OGLUM12G07230.1 Oryza glumaepatula 48 2e-24 108
WERAM-Brd-0034 BRADI1G64740.1 Brachypodium distachyon 36 1e-17 86.7
WERAM-Ors-0029 OS03T0302200-01 Oryza sativa 36 2e-17 85.9
WERAM-Orr-0033 ORUFI03G14970.1 Oryza rufipogon 36 2e-17 85.9
WERAM-Orl-0025 KN538743.1_FGP047 Oryza longistaminata 36 3e-17 85.5
WERAM-Ori-0040 BGIOSGA012447-PA Oryza indica 36 3e-17 85.5
WERAM-Org-0033 ORGLA03G0138300.1 Oryza glaberrima 35 6e-17 84.3
WERAM-Sei-0129 Si034380m Setaria italica 35 3e-16 82.0
WERAM-Prp-0033 EMJ09913 Prunus persica 32 9e-13 70.5
WERAM-Pot-0057 POPTR_0005s02090.1 Populus trichocarpa 36 1e-12 70.5
WERAM-Sot-0077 PGSC0003DMT400063610 Solanum tuberosum 34 2e-11 66.2
WERAM-Mum-0156 ENSMUSP00000101648.2 Mus musculus 26 7e-11 64.3
WERAM-Ten-0135 ENSTNIP00000014327.1 Tetraodon nigroviridis 26 7e-11 64.3
WERAM-Xet-0040 ENSXETP00000013295.2 Xenopus tropicalis 28 3e-10 62.4
WERAM-Mim-0048 ENSMICP00000004622.1 Microcebus murinus 27 3e-10 62.4
WERAM-Eqc-0056 ENSECAP00000007535.1 Equus caballus 25 4e-10 62.0
WERAM-Prc-0102 ENSPCAP00000009508.1 Procavia capensis 26 5e-10 61.2
WERAM-Dan-0180 ENSDNOP00000022618.1 Dasypus novemcinctus 27 8e-10 60.8
WERAM-Anc-0159 ENSACAP00000014763.2 Anolis carolinensis 27 1e-09 60.5
WERAM-Cap-0022 ENSCPOP00000001918.2 Cavia porcellus 26 1e-09 60.1
WERAM-Tut-0130 ENSTTRP00000010567.1 Tursiops truncatus 26 1e-09 60.1
WERAM-Ran-0112 ENSRNOP00000046880.2 Rattus norvegicus 27 1e-09 60.1
WERAM-Orn-0180 ENSONIP00000018332.1 Oreochromis niloticus 26 1e-09 59.7
WERAM-Ict-0170 ENSSTOP00000017980.1 Ictidomys tridecemlineatus 27 1e-09 59.7
WERAM-Loa-0135 ENSLAFP00000027656.1 Loxodonta africana 26 2e-09 59.7
WERAM-Osl-0017 ABO99782 Ostreococcus lucimarinus 28 2e-09 58.9
WERAM-Tar-0131 ENSTRUP00000028633.1 Takifugu rubripes 25 5e-09 58.2
WERAM-Dar-0171 ENSDARP00000105056.1 Danio rerio 25 5e-09 58.2
WERAM-Cii-0005 ENSCINP00000001413.3 Ciona intestinalis 29 5e-09 57.8
WERAM-Ptv-0064 ENSPVAP00000006487.1 Pteropus vampyrus 25 1e-08 57.0
WERAM-Pof-0040 ENSPFOP00000003263.2 Poecilia formosa 25 2e-08 55.8
WERAM-Drm-0059 FBpp0078401 Drosophila melanogaster 24 3e-08 55.5
WERAM-Orc-0017 ENSOCUP00000002009.2 Oryctolagus cuniculus 25 3e-08 55.5
WERAM-Sob-0132 Sb10g010430.1 Sorghum bicolor 45 1e-07 53.9
WERAM-Caj-0125 ENSCJAP00000022309.2 Callithrix jacchus 22 1e-07 53.9
WERAM-Leo-0004 ENSLOCP00000000547.1 Lepisosteus oculatus 22 1e-07 53.1
WERAM-Gag-0029 GGTG_10031T0 Gaeumannomyces graminis 26 1e-06 50.1
WERAM-Sem-0082 EFJ16569 Selaginella moellendorffii 29 4e-06 48.5
Created Date 25-Jun-2016