WERAM Information

Tag Content
WERAM ID WERAM-Bro-0119
Ensembl Protein ID Bo6g121200.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo6g121200 Bo6g121200.1 Bo6g121200.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 1.60e-23 84.1 214 428
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   3 iClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                    C +Cg++   ++ ++ Cd+C+d +H++C ++ +++++++  wyC +C++
  Bo6g121200.1 214 ACKLCGEKAVVKD-CLACDHCEDMYHVSCAHPGEKEMSSD-TWYCLNCTA 261
                   7****88888876.*******************9999999.9******85 PP
       PHD.txt   3 iClvCgkddegekemvqCde 22 
                    C+vC+k+++++  +++ d+
  Bo6g121200.1 270 NCVVCEKKKTEKL-LIKTDK 288
                   5999976666654.776555 PP
       PHD.txt   2 tiClvCg.kddegeke.mvqCde..Cd.dwfHlkCvklplsslpegkswyCpsC 50 
                   ++C++Cg k+++g+   ++ Cd+  C+ + +H++C++ ++ +l++  swyC sC
  Bo6g121200.1 329 ELCRTCGtKVEKGDGNrFITCDHpfCPhKYYHIRCLTSKQIKLHNV-SWYCSSC 381
                   58****55666654445*********9899*********9999999.******* PP
       PHD.txt   4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCk 51 
                   C+ C  d++++k +v Cd+Cdd++H++C+k+p  s+p+g +w+C++Ck
  Bo6g121200.1 383 CRNCLIDKDDDK-IVLCDGCDDAYHIYCMKPPCASVPDG-EWFCRTCK 428
                   999*75555555.**************************.*******8 PP
Protein Sequence
(Fasta)		MIVDEVMSNG DGRESSQPNG TLNMANASSR DNKRRKVNGM CEMVSTDGLS RSRESVACEL 60
NGQRSSGGTH LTGELPQLSN PDEPTTEPPK YETVTAGCQN VLSQVLASKE FASLSKLLSE 120
NLQGVKIEDL PCRTLIDTRM QEGAYEGSHV LFSTDLQEVW KKLQDVGNGM AVLAGSLLDL 180
SKASCTEQLK QFNTVEPNPH PNVETTRNDS VEDACKLCGE KAVVKDCLAC DHCEDMYHVS 240
CAHPGEKEMS SDTWYCLNCT ANGFGSPHEN CVVCEKKKTE KLLIKTDKNG CVDDSSAERK 300
EESNGSEENS TSNMMNHVDD AMETKIDSEL CRTCGTKVEK GDGNRFITCD HPFCPHKYYH 360
IRCLTSKQIK LHNVSWYCSS CLCRNCLIDK DDDKIVLCDG CDDAYHIYCM KPPCASVPDG 420
EWFCRTCKVA IQKVRKFRNV VEKKKVGAVQ KLKGKMNESK PGSKGKGGLD NSVGGMDMLL 480
NAADTLKDQE QM 492
Nucleotide Sequence
(Fasta)		ATGATTGTGG ATGAGGTGAT GAGCAACGGT GACGGTAGAG AGAGTAGTCA GCCTAATGGT 60
ACATTGAATA TGGCTAATGC AAGTTCTAGA GATAACAAGC GGAGAAAGGT TAATGGGATG 120
TGTGAGATGG TTTCTACGGA TGGTCTCTCA AGAAGCCGGG AGTCTGTCGC TTGTGAATTA 180
AATGGTCAAA GGTCCAGCGG AGGAACTCAT CTTACTGGTG AACTCCCCCA GCTTTCAAAT 240
CCAGATGAAC CAACAACCGA ACCCCCCAAG TATGAGACTG TGACAGCCGG TTGCCAGAAT 300
GTTCTGTCTC AAGTTTTAGC TTCAAAGGAG TTTGCTTCCC TCAGTAAGTT GCTTTCCGAG 360
AATCTCCAAG GGGTCAAGAT TGAAGACCTT CCCTGCAGAA CTTTGATAGA CACCAGGATG 420
CAAGAGGGTG CTTATGAAGG TTCACATGTG CTCTTCTCAA CGGATCTCCA AGAGGTCTGG 480
AAAAAACTAC AGGATGTTGG TAATGGTATG GCTGTTCTTG CTGGTAGTCT CTTGGATCTT 540
TCAAAAGCCT CTTGTACCGA ACAGTTGAAG CAGTTCAACA CTGTGGAACC TAACCCTCAT 600
CCTAATGTAG AGACCACCAG AAACGACAGT GTTGAAGACG CTTGCAAGCT ATGTGGAGAG 660
AAGGCAGTGG TAAAGGACTG TTTAGCTTGT GATCATTGTG AAGATATGTA CCATGTCTCA 720
TGTGCACATC CTGGTGAGAA AGAGATGTCT TCAGACACTT GGTACTGCCT AAACTGCACA 780
GCTAATGGAT TCGGATCACC TCACGAGAAT TGCGTTGTGT GCGAGAAAAA GAAAACCGAA 840
AAGCTGCTGA TAAAGACAGA TAAGAACGGA TGCGTTGATG ATTCGAGTGC AGAACGTAAA 900
GAAGAATCAA ACGGATCAGA AGAGAATTCA ACATCCAACA TGATGAATCA TGTAGATGAC 960
GCCATGGAGA CAAAGATAGA TTCTGAACTC TGCAGGACAT GTGGGACAAA AGTGGAGAAA 1020
GGCGATGGGA ACAGGTTCAT CACATGCGAT CACCCTTTCT GCCCACACAA GTACTACCAC 1080
ATCAGGTGTC TGACTTCAAA GCAGATAAAG CTACACAACG TCAGCTGGTA CTGCTCCTCG 1140
TGCTTATGCA GAAACTGCTT AATCGACAAG GATGATGACA AGATTGTCTT GTGCGACGGG 1200
TGTGATGATG CTTACCACAT CTACTGCATG AAGCCTCCGT GTGCGTCGGT TCCAGATGGA 1260
GAATGGTTTT GCAGGACTTG TAAAGTTGCG ATTCAGAAAG TGCGCAAGTT TCGAAATGTG 1320
GTTGAGAAGA AGAAGGTGGG GGCTGTGCAG AAACTGAAAG GGAAGATGAA CGAGAGCAAA 1380
CCGGGAAGTA AAGGCAAAGG AGGGTTGGAT AATAGCGTAG GAGGGATGGA TATGCTTCTT 1440
AACGCAGCTG ACACATTGAA AGATCAAGAA CAGATGTGA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0079 Bra015682.1-P Brassica rapa 90 0.0 846
WERAM-Arl-0020 fgenesh1_pg.C_scaffold_2001986 Arabidopsis lyrata 65 5e-174 608
WERAM-Art-0031 AT1G77250.1 Arabidopsis thaliana 61 4e-163 572
WERAM-Thc-0098 EOY16466 Theobroma cacao 44 6e-94 342
WERAM-Prp-0045 EMJ26345 Prunus persica 45 9e-91 331
WERAM-Glm-0157 GLYMA13G09495.1 Glycine max 44 6e-85 311
WERAM-Viv-0110 VIT_18s0001g01580.t01 Vitis vinifera 42 3e-83 306
WERAM-Pot-0025 POPTR_0002s07740.1 Populus trichocarpa 41 1e-82 304
WERAM-Sol-0066 Solyc04g058190.2.1 Solanum lycopersicum 41 2e-80 296
WERAM-Met-0070 KEH35359 Medicago truncatula 38 4e-75 279
WERAM-Mua-0078 GSMUA_Achr5P01220_001 Musa acuminata 34 3e-61 233
WERAM-Zem-0027 GRMZM2G039895_P01 Zea mays 34 2e-54 210
WERAM-Sei-0044 Si013357m Setaria italica 33 8e-49 192
WERAM-Sob-0095 Sb07g000565.1 Sorghum bicolor 34 8e-48 189
WERAM-Aet-0047 EMT19108 Aegilops tauschii 32 2e-47 187
WERAM-Orl-0066 KN539407.1_FGP010 Oryza longistaminata 31 2e-47 187
WERAM-Orm-0080 OMERI08G00680.1 Oryza meridionalis 31 3e-47 187
WERAM-Tru-0061 TRIUR3_24956-P1 Triticum urartu 32 4e-47 186
WERAM-Orbr-0006 OB01G28790.1 Oryza brachyantha 31 6e-47 186
WERAM-Orgl-0082 OGLUM08G00440.1 Oryza glumaepatula 32 6e-47 186
WERAM-Orni-0083 ONIVA08G00360.1 Oryza nivara 32 7e-47 185
WERAM-Ors-0076 OS08T0105000-01 Oryza sativa 32 7e-47 185
WERAM-Orr-0088 ORUFI08G00420.1 Oryza rufipogon 32 7e-47 185
WERAM-Ori-0094 BGIOSGA027795-PA Oryza indica 32 8e-47 185
WERAM-Orp-0081 OPUNC08G00430.1 Oryza punctata 32 9e-47 185
WERAM-Orb-0085 OBART08G00380.1 Oryza barthii 31 2e-46 184
WERAM-Hov-0009 MLOC_11874.1 Hordeum vulgare 31 7e-46 182
WERAM-Tra-0284 Traes_7AL_41A929C0D.1 Triticum aestivum 31 2e-45 181
WERAM-Brd-0071 BRADI3G13210.1 Brachypodium distachyon 30 3e-45 180
WERAM-Sot-0052 PGSC0003DMT400046397 Solanum tuberosum 44 3e-41 167
WERAM-Lep-0006 LPERR01G16460.1 Leersia perrieri 30 6e-41 166
WERAM-Amt-0050 ERN13236 Amborella trichopoda 33 3e-39 160
WERAM-Org-0006 ORGLA01G0155400.1 Oryza glaberrima 32 2e-33 140
WERAM-Gog-0210 ENSGGOP00000027941.1 Gorilla gorilla 33 6e-14 76.6
WERAM-Sah-0130 ENSSHAP00000013860.1 Sarcophilus harrisii 32 2e-13 75.1
WERAM-Php-0045 PP1S200_118V6.1 Physcomitrella patens 39 4e-13 73.9
WERAM-Hos-0018 ENSP00000347325.3 Homo sapiens 32 5e-13 73.6
WERAM-Pat-0168 ENSPTRP00000046674.3 Pan troglodytes 32 5e-13 73.6
WERAM-Poa-0169 ENSPPYP00000020408.2 Pongo abelii 32 5e-13 73.2
WERAM-Nol-0046 ENSNLEP00000005663.2 Nomascus leucogenys 32 5e-13 73.2
WERAM-Gaa-0092 ENSGACP00000011950.1 Gasterosteus aculeatus 31 5e-13 73.2
WERAM-Mum-0152 ENSMUSP00000043874.7 Mus musculus 32 5e-13 73.2
WERAM-Chs-0076 ENSCSAP00000002864.1 Chlorocebus sabaeus 32 5e-13 73.2
WERAM-Prc-0090 ENSPCAP00000008256.1 Procavia capensis 32 5e-13 73.2
WERAM-Mam-0056 ENSMMUP00000009467.2 Macaca mulatta 32 5e-13 73.2
WERAM-Paa-0005 ENSPANP00000006150.1 Papio anubis 32 6e-13 73.2
WERAM-Ran-0259 ENSRNOP00000072878.1 Rattus norvegicus 32 6e-13 73.2
WERAM-Ova-0045 ENSOARP00000005594.1 Ovis aries 31 6e-13 73.2
WERAM-Asm-0140 ENSAMXP00000013406.1 Astyanax mexicanus 32 6e-13 73.2
WERAM-Meg-0048 ENSMGAP00000004625.2 Meleagris gallopavo 34 6e-13 73.2
WERAM-Ora-0065 ENSOANP00000009850.3 Ornithorhynchus anatinus 32 7e-13 72.8
WERAM-Gaga-0065 ENSGALP00000010110.4 Gallus gallus 32 7e-13 72.8
WERAM-Tut-0198 ENSTTRP00000016174.1 Tursiops truncatus 31 7e-13 72.8
WERAM-Mup-0098 ENSMPUP00000009152.1 Mustela putorius furo 31 7e-13 72.8
WERAM-Bot-0193 ENSBTAP00000028347.5 Bos taurus 31 7e-13 72.8
WERAM-Eqc-0189 ENSECAP00000020200.1 Equus caballus 31 7e-13 72.8
WERAM-Anp-0025 ENSAPLP00000003226.1 Anas platyrhynchos 32 7e-13 72.8
WERAM-Orc-0115 ENSOCUP00000009766.3 Oryctolagus cuniculus 31 8e-13 72.8
WERAM-Cap-0018 ENSCPOP00000001682.2 Cavia porcellus 31 8e-13 72.8
WERAM-Myl-0122 ENSMLUP00000010086.2 Myotis lucifugus 31 8e-13 72.8
WERAM-Fec-0096 ENSFCAP00000008002.3 Felis catus 31 8e-13 72.8
WERAM-Ict-0124 ENSSTOP00000012342.2 Ictidomys tridecemlineatus 31 8e-13 72.8
WERAM-Aim-0154 ENSAMEP00000014067.1 Ailuropoda melanoleuca 31 8e-13 72.8
WERAM-Tar-0071 ENSTRUP00000014027.1 Takifugu rubripes 31 9e-13 72.4
WERAM-Ptv-0086 ENSPVAP00000007862.1 Pteropus vampyrus 31 9e-13 72.4
WERAM-Mod-0077 ENSMODP00000012203.3 Monodelphis domestica 43 1e-12 72.0
WERAM-Tag-0008 ENSTGUP00000000641.1 Taeniopygia guttata 32 1e-12 71.6
WERAM-Ocp-0124 ENSOPRP00000012666.1 Ochotona princeps 30 2e-12 71.6
WERAM-Leo-0073 ENSLOCP00000009304.1 Lepisosteus oculatus 37 2e-12 71.2
WERAM-Lac-0079 ENSLACP00000010253.1 Latimeria chalumnae 33 2e-12 71.2
WERAM-Mae-0078 ENSMEUP00000007759.1 Macropus eugenii 42 3e-12 70.9
WERAM-Sus-0005 ENSSSCP00000000202.2 Sus scrofa 33 4e-12 70.5
WERAM-Orla-0181 ENSORLP00000020984.1 Oryzias latipes 33 4e-12 70.1
WERAM-Vip-0013 ENSVPAP00000001498.1 Vicugna pacos 31 4e-12 70.1
WERAM-Ten-0186 ENSTNIP00000018287.1 Tetraodon nigroviridis 31 5e-12 70.1
WERAM-Dio-0006 ENSDORP00000000973.1 Dipodomys ordii 42 5e-12 70.1
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 35 5e-12 70.1
WERAM-Loa-0099 ENSLAFP00000008377.4 Loxodonta africana 33 5e-12 69.7
WERAM-Pof-0076 ENSPFOP00000007738.1 Poecilia formosa 36 6e-12 69.7
WERAM-Mim-0074 ENSMICP00000007161.1 Microcebus murinus 42 6e-12 69.7
WERAM-Chh-0008 ENSCHOP00000000593.1 Choloepus hoffmanni 34 6e-12 69.7
WERAM-Gam-0044 ENSGMOP00000004922.1 Gadus morhua 31 6e-12 69.7
WERAM-Caf-0167 ENSCAFP00000023835.3 Canis familiaris 42 7e-12 69.7
WERAM-Otg-0056 ENSOGAP00000003880.2 Otolemur garnettii 42 7e-12 69.3
WERAM-Caj-0062 ENSCJAP00000010885.1 Callithrix jacchus 42 8e-12 69.3
WERAM-Anc-0148 ENSACAP00000014142.2 Anolis carolinensis 32 8e-12 69.3
WERAM-Scj-0029 EEB08480 Schizosaccharomyces japonicus 46 1e-11 68.9
WERAM-Fia-0004 ENSFALP00000000459.1 Ficedula albicollis 43 1e-11 68.6
WERAM-Xim-0205 ENSXMAP00000016470.1 Xiphophorus maculatus 37 2e-11 68.2
WERAM-Dar-0173 ENSDARP00000122949.2 Danio rerio 34 3e-11 67.8
WERAM-Ere-0114 ENSEEUP00000012051.1 Erinaceus europaeus 51 3e-11 67.8
WERAM-Pem-0018 ENSPMAP00000002590.1 Petromyzon marinus 38 5e-11 66.6
Created Date 25-Jun-2016