WERAM Information

Tag Content
WERAM ID WERAM-Bro-0103
Ensembl Protein ID Bo5g141320.1
Gene Name IBM1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo5g141320 Bo5g141320.1 Bo5g141320.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.30e-80 271.6 660 890
Organism Brassica oleracea
Domain Profile
  HDM JHDM2
     JHDM2.txt   4 krdgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy..............vgilkkkwaeedlkellksieee... 83 
                   ++ g+lNLa+klp+++++pd+gPk+y+AyG+++e +r++++t+lh+d+sdavn+l++              ++ lk k+a +d+kel  s+ +    
  Bo5g141320.1 660 PVSGPLNLAVKLPEKCLKPDMGPKTYVAYGFSQEMGRGDSVTKLHCDMSDAVNVLTHvsevtikeeekkstIEKLKRKHAAQDVKELFGSVPNYkek 756
                   478************************************************************************************9887654455 PP
     JHDM2.txt  84 .eldevt.rkrvqdpkekpgalWhifaakdaekirellekvskeqga....evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlip 174
                    e++e+t  + v++ + + galW+if+++d++k++++l  ++ke+++    +v+++++pihdqs+yl+r++++ L+eeyG+e+wt+vQklgdavlip
  Bo5g141320.1 757 iEILENTsEEEVKNLEADGGALWDIFRREDVPKLEKYLLSHHKEFRHffcsPVSKVVHPIHDQSFYLTRYHKMILKEEYGIEPWTFVQKLGDAVLIP 853
                   88877762678***********************************99999999******************************************* PP
     JHDM2.txt 175 agapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                   +g+pHqv+nlksc kva dFvsPEn++ecfrltkeyr
  Bo5g141320.1 854 VGCPHQVRNLKSCTKVALDFVSPENISECFRLTKEYR 890
                   ************************************8 PP
Protein Sequence
(Fasta)		MSSTNEEAIR VVAEEPNPRA VRIRAPRACT VPVDYAEPPI DGEDFESKPK AKRGRPRKNP 60
EEDEKASDTP KAKPGRPRKI SGEDDDKPKA KPGRPRKNPE QDQKTSDTPK AKPEEDQKTD 120
DKPKAKPGRP RKYPVNGEDE KSTKKVDQGV IACLERKENG ADESKASDGM PRFKKVYSRK 180
RPMKEEKKKD DELVSKGPVK RPRKVVVGCL NKDEDNAEES ECMMCHQCQR NDNGEVVRCH 240
NCCDRKRYCH KCLETWYPRI PHEDIAKKCP FCWNTCNCRA CLRLDTKMEG LNSDLKVSKD 300
EEVQCSKYIL QKLLPHLKEI NDEQVLEKEA EANISGLEFG EVKPEDTNCS PGERLYCDSC 360
QTAIFDLHRH CSSCGSDICI ACSMEIRNGK LQACQEDVYW NYISRGLDYL HGGKEKNGKP 420
TDDKLEPESL LAIVKPPSTW KTDEVGIITC CCGEGVLELK RVLPDGWVSD LVKKVEETVE 480
ANKLFDLPEM ATERCPCFNS EGHIDMETNK NLLKAACREG SEDNYLYFPS ATDAQEEINL 540
KHFQHHWAKG EPVIVRNVLE ATAGLSWEPG VMHRACRQMR STKHETLLDV NAIDCLDCCE 600
GSINLHAFFT GYQKGRYDRE GWPSVLKLKD WPPSKSFNEN LPRHCEEFLC SLPLKQYTHP 660
VSGPLNLAVK LPEKCLKPDM GPKTYVAYGF SQEMGRGDSV TKLHCDMSDA VNVLTHVSEV 720
TIKEEEKKST IEKLKRKHAA QDVKELFGSV PNYKEKIEIL ENTSEEEVKN LEADGGALWD 780
IFRREDVPKL EKYLLSHHKE FRHFFCSPVS KVVHPIHDQS FYLTRYHKMI LKEEYGIEPW 840
TFVQKLGDAV LIPVGCPHQV RNLKSCTKVA LDFVSPENIS ECFRLTKEYR LLPPNHHSKE 900
DKLQIKNMVI FAIDKALEDL DPNYESPVAK EEEKKVTKTG RKRKNREMSN GANVLA 956
Nucleotide Sequence
(Fasta)		ATGAGTTCTA CGAATGAGGA AGCTATTAGG GTTGTTGCCG AAGAACCGAA TCCACGAGCT 60
GTTCGGATTA GGGCGCCGAG AGCTTGTACT GTCCCGGTGG ATTACGCCGA GCCTCCGATT 120
GACGGCGAAG ATTTCGAAAG CAAGCCAAAG GCGAAACGAG GCAGGCCTCG TAAAAACCCT 180
GAAGAAGACG AGAAGGCGAG CGATACACCC AAGGCTAAAC CGGGGAGGCC TCGGAAAATT 240
TCTGGAGAAG ATGATGATAA ACCGAAGGCT AAACCGGGCA GGCCTCGGAA AAATCCTGAA 300
CAAGACCAGA AGACGAGTGA TACACCCAAG GCTAAACCTG AAGAAGACCA GAAGACTGAT 360
GATAAACCGA AGGCTAAACC GGGGAGGCCT CGGAAGTATC CCGTCAACGG AGAAGACGAA 420
AAGTCAACGA AGAAAGTTGA CCAAGGTGTT ATCGCTTGTT TAGAGAGGAA GGAGAATGGA 480
GCTGATGAGA GTAAGGCTTC TGATGGAATG CCTAGGTTCA AAAAGGTTTA TTCTCGTAAA 540
AGGCCAATGA AAGAAGAGAA GAAGAAGGAT GATGAACTTG TTTCTAAAGG TCCTGTTAAG 600
AGGCCTCGGA AAGTGGTGGT AGGTTGTCTC AACAAAGACG AGGATAACGC TGAAGAATCA 660
GAGTGCATGA TGTGTCATCA GTGTCAACGT AACGATAATG GGGAGGTTGT GCGGTGTCAC 720
AACTGCTGCG ATAGGAAGCG TTATTGCCAC AAATGCTTAG AAACTTGGTA CCCTCGCATC 780
CCACATGAAG ACATTGCCAA GAAATGCCCC TTTTGCTGGA ATACTTGCAA TTGCAGAGCA 840
TGCTTGCGTC TAGATACTAA AATGGAAGGG TTAAATTCAG ACCTCAAGGT TAGCAAGGAC 900
GAAGAAGTCC AATGCTCTAA GTATATTCTG CAAAAGCTTC TCCCACATCT GAAGGAAATA 960
AACGATGAAC AAGTTCTTGA GAAGGAAGCT GAGGCAAATA TATCAGGACT AGAGTTTGGA 1020
GAGGTGAAGC CTGAAGACAC TAATTGTAGC CCTGGCGAAA GACTATACTG TGATAGCTGC 1080
CAGACTGCGA TCTTTGACCT TCATAGACAT TGCTCGAGCT GCGGTTCTGA TATCTGCATT 1140
GCATGTTCCA TGGAGATCCG AAATGGAAAG CTTCAGGCAT GTCAGGAGGA TGTTTACTGG 1200
AATTACATTA GCCGAGGTTT AGATTACCTA CATGGAGGAA AAGAAAAAAA TGGAAAACCT 1260
ACGGATGATA AGCTGGAGCC GGAATCATTA CTTGCTATTG TCAAGCCCCC ATCTACTTGG 1320
AAAACAGATG AAGTCGGAAT CATTACTTGC TGTTGTGGTG AGGGGGTTTT AGAGTTGAAA 1380
CGCGTGCTTC CCGATGGTTG GGTATCTGAT TTGGTCAAAA AGGTTGAAGA AACTGTTGAA 1440
GCCAACAAGC TTTTCGATTT ACCTGAAATG GCCACAGAGA GATGCCCTTG TTTTAACTCC 1500
GAAGGCCATA TTGACATGGA AACCAACAAA AACTTGTTAA AGGCTGCATG TAGAGAAGGA 1560
TCGGAAGACA ATTATCTATA TTTTCCAAGT GCTACAGATG CTCAGGAGGA GATTAACCTG 1620
AAGCATTTTC AGCATCATTG GGCTAAAGGA GAGCCTGTGA TTGTGAGGAA CGTGCTTGAG 1680
GCTACAGCTG GTTTAAGCTG GGAACCAGGT GTTATGCATC GTGCTTGCCG TCAGATGAGA 1740
AGCACCAAGC ATGAAACACT TCTGGACGTT AATGCTATTG ATTGTCTGGA CTGCTGTGAG 1800
GGATCTATTA ATCTTCATGC ATTCTTTACC GGTTACCAAA AAGGCCGTTA CGATCGTGAG 1860
GGTTGGCCAA GTGTTCTGAA ACTAAAAGAT TGGCCTCCAT CGAAGAGCTT CAATGAAAAC 1920
TTGCCGCGTC ATTGTGAGGA GTTCTTATGC AGTTTGCCTT TGAAGCAGTA CACTCACCCG 1980
GTTAGTGGGC CATTAAATCT CGCTGTGAAG TTGCCTGAAA AGTGCTTGAA GCCAGACATG 2040
GGACCAAAGA CTTACGTTGC TTATGGATTT TCACAAGAAA TGGGCCGTGG AGATTCAGTA 2100
ACCAAACTCC ACTGCGACAT GTCTGATGCG GTTAATGTGC TGACCCACGT AAGTGAAGTG 2160
ACCATCAAAG AGGAAGAAAA GAAATCCACA ATAGAAAAAC TGAAGAGGAA GCATGCTGCA 2220
CAAGATGTCA AGGAGCTGTT TGGCTCGGTT CCTAACTACA AGGAAAAGAT AGAGATTCTT 2280
GAAAACACTA GTGAAGAAGA AGTCAAGAAC CTTGAAGCTG ATGGAGGAGC TCTTTGGGAC 2340
ATTTTCCGTA GAGAAGATGT TCCAAAATTA GAGAAATACC TTCTGAGTCA TCATAAAGAG 2400
TTTCGACATT TCTTTTGTTC CCCCGTCTCT AAGGTGGTTC ATCCAATACA TGACCAGTCT 2460
TTCTATCTGA CGCGTTATCA TAAAATGATT CTGAAAGAAG AATACGGCAT TGAGCCATGG 2520
ACGTTTGTTC AGAAGCTTGG AGATGCTGTG TTAATACCTG TTGGCTGCCC TCATCAAGTC 2580
AGGAACTTGA AGTCTTGCAC AAAGGTGGCG CTTGACTTTG TCTCACCTGA AAATATCAGC 2640
GAGTGTTTCC GTTTAACAAA GGAGTATCGT CTGCTACCAC CAAACCATCA TTCAAAAGAG 2700
GACAAGTTGC AGATAAAGAA TATGGTGATC TTTGCAATCG ATAAGGCTCT CGAAGACTTG 2760
GATCCAAATT ACGAGTCTCC TGTAGCCAAA GAGGAGGAGA AGAAGGTGAC GAAGACTGGA 2820
AGGAAGCGTA AAAACCGTGA GATGAGTAAT GGAGCTAATG TGTTGGCTTG A 2872
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0149 Bra029664.1-P Brassica rapa 91 0.0 1662
WERAM-Art-0066 AT3G07610.1 Arabidopsis thaliana 59 0.0 986
WERAM-Arl-0040 fgenesh1_pm.C_scaffold_8000499 Arabidopsis lyrata 67 0.0 944
WERAM-Pot-0062 POPTR_0005s08460.1 Populus trichocarpa 56 0.0 774
WERAM-Met-0036 AES62955 Medicago truncatula 54 0.0 751
WERAM-Thc-0088 EOY14163 Theobroma cacao 52 0.0 709
WERAM-Glm-0245 GLYMA19G12090.1 Glycine max 48 0.0 706
WERAM-Viv-0065 VIT_10s0042g00830.t01 Vitis vinifera 49 0.0 656
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 50 0.0 646
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 44 0.0 631
WERAM-Sol-0029 Solyc02g081010.1.1 Solanum lycopersicum 49 1e-177 621
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 39 4e-177 619
WERAM-Prp-0037 EMJ15852 Prunus persica 47 2e-176 617
WERAM-Sei-0128 Si034182m Setaria italica 44 4e-175 612
WERAM-Orgl-0039 OGLUM03G23040.1 Oryza glumaepatula 43 8e-158 555
WERAM-Orl-0076 KN539615.1_FGP001 Oryza longistaminata 43 2e-156 550
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 42 9e-153 538
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 42 3e-152 536
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 48 6e-152 535
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 46 8e-152 535
WERAM-Aet-0048 EMT13865 Aegilops tauschii 45 1e-151 534
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 42 5e-147 519
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 40 3e-140 497
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 40 1e-139 494
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 41 3e-135 480
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 47 1e-134 478
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 40 2e-134 478
WERAM-Amt-0041 ERN17369 Amborella trichopoda 44 2e-125 447
WERAM-Brd-0103 BRADI4G27417.1 Brachypodium distachyon 45 2e-123 441
WERAM-Mua-0155 GSMUA_AchrUn_randomP11860_001 Musa acuminata 48 2e-123 441
WERAM-Ors-0026 OS02T0828900-01 Oryza sativa 44 3e-123 440
WERAM-Php-0101 PP1S444_19V6.1 Physcomitrella patens 45 6e-123 439
WERAM-Hov-0012 MLOC_12624.1 Hordeum vulgare 46 1e-122 438
WERAM-Org-0029 ORGLA02G0333900.1 Oryza glaberrima 44 7e-122 436
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 37 3e-61 234
WERAM-Gaa-0189 ENSGACP00000023958.1 Gasterosteus aculeatus 37 2e-60 231
WERAM-Ten-0123 ENSTNIP00000013426.1 Tetraodon nigroviridis 36 7e-59 226
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 37 8e-59 226
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 36 1e-58 225
WERAM-Asm-0165 ENSAMXP00000016507.1 Astyanax mexicanus 37 1e-58 225
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 37 2e-58 225
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 37 2e-58 225
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 37 2e-58 225
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 37 2e-58 225
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 37 2e-58 225
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 37 2e-58 225
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 37 2e-58 225
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 37 2e-58 224
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 37 2e-58 224
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 37 2e-58 224
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 37 2e-58 224
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 37 2e-58 224
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 37 2e-58 224
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 37 2e-58 224
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 37 2e-58 224
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 37 2e-58 224
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 37 3e-58 224
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 37 3e-58 224
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 37 3e-58 224
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 37 3e-58 224
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 37 3e-58 224
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 37 3e-58 224
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 37 3e-58 224
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 37 3e-58 224
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 37 3e-58 224
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 35 4e-58 224
WERAM-Orn-0157 ENSONIP00000016309.1 Oreochromis niloticus 36 4e-58 224
WERAM-Lac-0170 ENSLACP00000020024.1 Latimeria chalumnae 36 5e-58 224
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 37 8e-58 223
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 36 8e-58 223
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 36 9e-58 223
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 37 9e-58 223
WERAM-Pof-0098 ENSPFOP00000008824.2 Poecilia formosa 35 9e-58 223
WERAM-Xim-0102 ENSXMAP00000009010.1 Xiphophorus maculatus 35 1e-57 222
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 36 1e-57 222
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 36 2e-57 221
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 35 3e-57 221
WERAM-Cii-0009 ENSCINP00000003397.3 Ciona intestinalis 28 4e-57 221
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 37 5e-57 220
WERAM-Pem-0063 ENSPMAP00000006992.1 Petromyzon marinus 35 5e-57 220
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 35 7e-57 220
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 35 8e-57 219
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 35 8e-57 219
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 35 1e-56 219
Created Date 25-Jun-2016