WERAM Information

Tag Content
WERAM ID WERAM-Bro-0086
Ensembl Protein ID Bo4g191330.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g191330 Bo4g191330.1 Bo4g191330.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.50e-12 47.7 66 131
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   5 vsepFrepvdpq.leipdYydiikePmdLstikerleegnYss.peefvkDvrlifnNakaynenkss 70 
                   +   F   ++++ +eip+Y +ii++++d++ i++r eeg Y+s ++++ +D+ l++nN ka++ ++ss
  Bo4g191330.1  66 CGYLF--SCRLEtQEIPEYGNIIRQHVDFEMIRKRDEEGLYKSsMSKLFRDLLLLINNVKAFYLKGSS 131
                   55566..4556669****************************99******************988776 PP
Protein Sequence
(Fasta)		MAGAVDGGGE AKLTGDDSCR GSCEKESGVN SEREGSELDE LAEEVDNEDR SQPSISFVEM 60
LLSHPCGYLF SCRLETQEIP EYGNIIRQHV DFEMIRKRDE EGLYKSSMSK LFRDLLLLIN 120
NVKAFYLKGS SEFNSAEQLL QLVKKQMITT LERPREKLVR KHSSLAAKPL LMISPTGGDK 180
KGKKTDQVVD DEKLVLLKDE ETSGKDDESL VLKKMVRGKT STAKKVAIRN VKNSDSSLNE 240
VEKTDEEKKG NKSGSSKRKS VANFLKRMKG GCSSDIRSI 279
Nucleotide Sequence
(Fasta)		ATGGCCGGAG CCGTCGACGG AGGAGGAGAA GCGAAGCTGA CCGGAGATGA TTCGTGTAGA 60
GGGAGCTGCG AGAAGGAATC GGGAGTTAAC TCGGAGCGAG AAGGATCAGA GCTCGACGAG 120
CTTGCCGAGG AAGTGGATAA TGAGGATCGA TCTCAGCCGT CGATTAGTTT CGTCGAGATG 180
CTTCTGTCGC ATCCGTGTGG CTACCTCTTT TCGTGCCGAC TCGAAACCCA GGAAATACCA 240
GAGTACGGTA ATATAATCAG ACAGCACGTA GATTTTGAGA TGATTAGGAA ACGTGACGAA 300
GAAGGATTGT ACAAAAGTTC GATGAGCAAG TTGTTTCGCG ATTTGCTTCT ACTTATCAAC 360
AATGTTAAAG CGTTTTATCT CAAGGGCTCT TCTGAGTTCA ACTCTGCAGA GCAGCTTCTC 420
CAACTCGTCA AGAAACAGAT GATTACTACT CTCGAGAGAC CTAGAGAGAA GCTTGTACGG 480
AAACATAGTT CCTTGGCTGC TAAACCTTTG CTAATGATAT CACCCACTGG AGGTGACAAG 540
AAAGGGAAGA AGACAGATCA AGTGGTTGAT GATGAGAAGC TTGTTTTATT GAAGGATGAA 600
GAAACCTCTG GGAAAGATGA CGAGTCTCTG GTTTTGAAGA AGATGGTGAG AGGAAAAACC 660
TCTACGGCTA AAAAAGTAGC AATCAGGAAC GTCAAGAACA GTGATTCCAG CTTGAATGAG 720
GTTGAGAAAA CTGATGAGGA GAAGAAGGGT AACAAAAGTG GTAGCTCGAA AAGGAAAAGT 780
GTAGCTAATT TTCTCAAGAG AATGAAAGGT GGTTGTTCGT CTGATATCAG GAGTATCTAG 840
841
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0087 Bra016893.1-P Brassica rapa 72 1e-105 379
WERAM-Art-0056 AT2G42150.1 Arabidopsis thaliana 46 1e-56 216
WERAM-Arl-0012 Al_scaffold_0005_2712 Arabidopsis lyrata 40 6e-41 164
WERAM-Thc-0062 EOY09477 Theobroma cacao 32 2e-28 123
WERAM-Mua-0126 GSMUA_Achr8P25530_001 Musa acuminata 47 2e-19 93.6
WERAM-Viv-0085 VIT_13s0156g00340.t01 Vitis vinifera 42 8e-19 91.7
WERAM-Prp-0113 EMJ03206 Prunus persica 45 6e-18 88.6
WERAM-Tru-0078 TRIUR3_28812-P1 Triticum urartu 39 5e-16 82.4
WERAM-Lep-0092 LPERR08G16990.1 Leersia perrieri 39 9e-16 81.3
WERAM-Sol-0008 Solyc01g073950.2.1 Solanum lycopersicum 38 2e-15 80.1
WERAM-Sem-0100 EFJ37441 Selaginella moellendorffii 33 1e-14 77.4
WERAM-Met-0045 AES66032 Medicago truncatula 34 2e-14 77.0
WERAM-Aet-0108 EMT21081 Aegilops tauschii 39 5e-14 75.5
WERAM-Brd-0083 BRADI3G40060.1 Brachypodium distachyon 36 8e-14 75.1
WERAM-Sot-0018 PGSC0003DMT400016153 Solanum tuberosum 38 4e-13 72.8
WERAM-Orp-0090 OPUNC08G18190.1 Oryza punctata 35 4e-13 72.4
WERAM-Sob-0110 Sb07g027680.1 Sorghum bicolor 38 5e-13 72.0
WERAM-Glm-0202 GLYMA15G42440.2 Glycine max 33 1e-12 70.9
WERAM-Org-0093 ORGLA08G0177200.1 Oryza glaberrima 35 4e-12 69.3
WERAM-Orni-0095 ONIVA08G22660.1 Oryza nivara 35 5e-12 68.9
WERAM-Pot-0008 POPTR_0001s23640.1 Populus trichocarpa 40 6e-12 68.6
WERAM-Sei-0046 Si013408m Setaria italica 39 7e-12 68.6
WERAM-Ors-0085 OS08T0510700-01 Oryza sativa 34 1e-11 67.8
WERAM-Orr-0099 ORUFI08G22500.1 Oryza rufipogon 34 1e-11 67.8
WERAM-Ori-0091 BGIOSGA026697-PA Oryza indica 34 1e-11 67.8
WERAM-Php-0024 PP1S148_42V6.1 Physcomitrella patens 38 1e-11 67.8
WERAM-Orgl-0092 OGLUM08G21320.1 Oryza glumaepatula 35 1e-11 67.4
WERAM-Amt-0030 ERN11592 Amborella trichopoda 38 2e-11 66.6
WERAM-Hov-0028 MLOC_20426.3 Hordeum vulgare 42 2e-10 63.2
WERAM-Zem-0018 GRMZM2G022499_P01 Zea mays 34 1e-09 61.2
WERAM-Caa-0036 KGT63469 Candida albicans 24 1e-06 51.2
WERAM-Orb-0096 OBART08G20090.1 Oryza barthii 37 2e-06 50.4
Created Date 25-Jun-2016