WERAM Information

Tag Content
WERAM ID WERAM-Bro-0068
Ensembl Protein ID Bo4g039190.1
Gene Name IMB1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo4g039190 Bo4g039190.1 Bo4g039190.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 8.00e-25 88.2 176 247
Organism Brassica oleracea
Domain Profile
  Ac_Reader Bromodomain
     BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                   +++ ++pF epvd + l + dY+++i++PmdL ti+ ++e  +Ys++ e ++Dvrl+f+Na+ yne+k++v+
  Bo4g039190.1 176 QQKWAWPFLEPVDVEgLGLDDYHKVIEKPMDLGTIRTKMEGSEYSNVREIYADVRLVFKNAMRYNEEKHDVY 247
                   5789******************************************************************98 PP
Protein Sequence
(Fasta)		MGRTKKPRFE EPFLFQTLNR EKSEEGLADL LCFVLPSCVS WSVEKLASQY HASPMSVNVK 60
EEPVLAPNCD VVENSELEVL NGDEESKLED YGTCVDVITE RVNQLEQNVV EVEQFYSTKD 120
GAGQTNTSKS NSGGKKVAMS QPSKCSSAGK EKTRGKHVSS PELMRQFATI IRQIAQQKWA 180
WPFLEPVDVE GLGLDDYHKV IEKPMDLGTI RTKMEGSEYS NVREIYADVR LVFKNAMRYN 240
EEKHDVYVMA ESLLEKFEEK WLTIMPKLVE EEKKQAEEEA QDRASKQLAV EAAQAEKARD 300
LSNELYEIDQ ELEKLREIVV QKCRKLSTQE KKGLSAALGR LSPEDLSKAL KMVSEGNPHF 360
PAGAPEVELD IDLQSDVTLW RLKVFVQEAL KAANKSSGGG TNAQNNNNGG EMNKTAAKRR 420
REITEAIKAN KVKKAKKA 438
Nucleotide Sequence
(Fasta)		ATGGGCCGAA CAAAGAAGCC CAGATTCGAA GAGCCTTTTT TGTTCCAAAC CCTAAACCGG 60
GAAAAGAGCG AAGAAGGGTT AGCTGACCTT CTCTGCTTCG TCCTTCCTTC CTGCGTCTCC 120
TGGTCCGTGG AAAAGCTCGC GAGTCAGTAC CACGCGTCTC CAATGTCCGT AAACGTCAAG 180
GAGGAACCTG TGCTTGCCCC TAACTGCGAT GTCGTCGAGA ACTCAGAGCT CGAAGTTCTC 240
AACGGAGATG AGGAGAGTAA GCTTGAGGAT TATGGGACTT GTGTAGATGT TATAACCGAG 300
AGAGTCAATC AGCTTGAGCA AAATGTAGTG GAGGTTGAAC AGTTTTACTC CACCAAAGAC 360
GGAGCAGGTC AAACGAACAC TTCCAAGAGT AACTCCGGCG GTAAAAAAGT TGCTATGTCT 420
CAACCCTCCA AGTGTAGCTC CGCTGGGAAA GAGAAAACAA GAGGCAAACA TGTTTCCAGC 480
CCTGAACTTA TGCGTCAGTT TGCAACCATT ATTCGTCAGA TTGCTCAACA AAAATGGGCG 540
TGGCCGTTTT TGGAACCTGT TGATGTTGAA GGGCTAGGAC TCGATGATTA TCACAAGGTT 600
ATAGAGAAGC CAATGGATTT GGGAACTATT AGAACCAAAA TGGAGGGTTC GGAGTATAGC 660
AATGTCCGGG AGATATATGC TGATGTCAGG CTAGTTTTCA AGAACGCGAT GAGATATAAC 720
GAAGAGAAGC ATGATGTCTA TGTGATGGCT GAATCTCTCT TGGAGAAGTT TGAGGAGAAA 780
TGGCTTACCA TTATGCCTAA ACTCGTCGAA GAGGAAAAGA AACAAGCAGA GGAAGAGGCT 840
CAGGATCGTG CTAGTAAGCA GCTTGCTGTG GAGGCTGCTC AAGCAGAGAA GGCTAGAGAT 900
TTAAGCAACG AACTGTATGA GATTGATCAG GAGCTTGAGA AACTCAGGGA GATAGTGGTT 960
CAGAAATGCA GAAAGCTCTC CACTCAAGAG AAGAAGGGAC TTTCTGCAGC TTTAGGTCGA 1020
CTCTCTCCTG AGGATCTGTC CAAGGCGCTG AAAATGGTTT CAGAGGGCAA CCCGCATTTC 1080
CCTGCTGGAG CACCAGAAGT GGAGCTTGAC ATTGATCTTC AGAGTGATGT AACTTTGTGG 1140
AGGCTGAAGG TGTTTGTGCA AGAAGCACTG AAAGCAGCTA ACAAAAGCTC TGGAGGAGGA 1200
ACAAACGCAC AAAACAACAA TAATGGTGGA GAGATGAACA AGACCGCTGC GAAAAGAAGG 1260
AGAGAGATCA CTGAAGCTAT TAAAGCTAAT AAAGTTAAAA AAGCCAAGAA GGCTTGA 1318
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Brr-0024 Bra005383.1-P Brassica rapa 98 0.0 657
WERAM-Art-0052 AT2G34900.1 Arabidopsis thaliana 82 2e-158 556
WERAM-Arl-0073 fgenesh2_kg.4__ 1513__ AT2G34900.1 Arabidopsis lyrata 81 9e-157 550
WERAM-Thc-0018 EOX96796 Theobroma cacao 58 7e-93 338
WERAM-Prp-0066 EMJ19316 Prunus persica 59 9e-86 314
WERAM-Pot-0094 POPTR_0008s04260.1 Populus trichocarpa 51 3e-84 310
WERAM-Glm-0226 GLYMA17G23240.2 Glycine max 54 8e-84 308
WERAM-Viv-0080 VIT_13s0019g03950.t01 Vitis vinifera 65 7e-83 305
WERAM-Sol-0108 Solyc09g015660.2.1 Solanum lycopersicum 55 2e-81 300
WERAM-Met-0179 AET03443 Medicago truncatula 50 3e-77 286
WERAM-Ori-0070 BGIOSGA022262-PA Oryza indica 52 2e-75 280
WERAM-Tra-0006 Traes_1AL_E5E49D129.1 Triticum aestivum 53 2e-75 280
WERAM-Org-0056 ORGLA06G0024300.1 Oryza glaberrima 52 3e-75 280
WERAM-Orb-0058 OBART06G02360.1 Oryza barthii 52 3e-75 280
WERAM-Orr-0059 ORUFI06G02420.1 Oryza rufipogon 54 3e-75 280
WERAM-Orni-0055 ONIVA06G02920.1 Oryza nivara 52 3e-75 279
WERAM-Orl-0042 KN538905.1_FGP017 Oryza longistaminata 52 4e-75 279
WERAM-Tru-0010 TRIUR3_05662-P1 Triticum urartu 53 4e-75 279
WERAM-Orm-0056 OMERI06G02350.2 Oryza meridionalis 52 8e-75 278
WERAM-Orp-0056 OPUNC06G02290.1 Oryza punctata 51 2e-74 277
WERAM-Brd-0026 BRADI1G51430.1 Brachypodium distachyon 50 7e-73 271
WERAM-Hov-0061 MLOC_55782.1 Hordeum vulgare 48 1e-72 271
WERAM-Orbr-0068 OB06G12290.1 Oryza brachyantha 50 2e-72 270
WERAM-Amt-0020 ERM94715 Amborella trichopoda 55 6e-72 268
WERAM-Aet-0066 EMT01547 Aegilops tauschii 49 7e-72 268
WERAM-Mua-0129 GSMUA_Achr8P29340_001 Musa acuminata 52 3e-70 263
WERAM-Lep-0061 LPERR06G02150.1 Leersia perrieri 52 1e-69 261
WERAM-Sei-0027 Si006741m Setaria italica 52 1e-69 260
WERAM-Sot-0050 PGSC0003DMT400044320 Solanum tuberosum 52 3e-68 256
WERAM-Sob-0128 Sb10g002570.1 Sorghum bicolor 51 2e-65 247
WERAM-Zem-0063 GRMZM2G103166_P01 Zea mays 51 2e-65 247
WERAM-Php-0089 PP1S353_39V6.1 Physcomitrella patens 49 8e-57 218
WERAM-Sem-0080 EFJ19669 Selaginella moellendorffii 43 1e-46 184
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 32 7e-29 125
WERAM-Xim-0143 ENSXMAP00000011561.1 Xiphophorus maculatus 46 4e-25 113
WERAM-Pof-0204 ENSPFOP00000016934.2 Poecilia formosa 46 5e-25 112
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 33 7e-25 112
WERAM-Gaa-0037 ENSGACP00000005692.1 Gasterosteus aculeatus 45 1e-23 108
WERAM-Drm-0012 FBpp0071074 Drosophila melanogaster 47 2e-23 107
WERAM-Xet-0088 ENSXETP00000028569.3 Xenopus tropicalis 46 2e-23 107
WERAM-Osl-0042 ABO96608 Ostreococcus lucimarinus 33 2e-23 107
WERAM-Gam-0156 ENSGMOP00000015464.1 Gadus morhua 29 3e-23 107
WERAM-Lac-0022 ENSLACP00000003855.1 Latimeria chalumnae 42 3e-23 107
WERAM-Orla-0148 ENSORLP00000017453.1 Oryzias latipes 44 6e-23 106
WERAM-Leo-0065 ENSLOCP00000008328.1 Lepisosteus oculatus 46 7e-23 105
WERAM-Orn-0021 ENSONIP00000002329.1 Oreochromis niloticus 42 9e-23 105
WERAM-Pem-0074 ENSPMAP00000008062.1 Petromyzon marinus 52 1e-22 104
WERAM-Eqc-0123 ENSECAP00000013753.1 Equus caballus 44 2e-22 104
WERAM-Ten-0049 ENSTNIP00000004900.1 Tetraodon nigroviridis 42 2e-22 104
WERAM-Asm-0174 ENSAMXP00000017222.1 Astyanax mexicanus 41 2e-22 104
WERAM-Tar-0198 ENSTRUP00000040915.1 Takifugu rubripes 45 3e-22 103
WERAM-Otg-0019 ENSOGAP00000000893.2 Otolemur garnettii 42 3e-22 103
WERAM-Mup-0046 ENSMPUP00000004278.1 Mustela putorius furo 43 5e-22 103
Created Date 25-Jun-2016