WERAM Information

Tag Content
WERAM ID WERAM-Sob-0128
Ensembl Protein ID Sb10g002570.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Sb10g002570 Sb10g002570.1 Sb10g002570.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 7.10e-25 87.7 21 165
Organism Sorghum bicolor
Domain Profile
  Ac_Reader Bromodomain
      BROMO.txt  4 evsepFrepvdpq.leipdYydiikePmdL 32
                   +++++Fr++vd    +     + +ke +d+
  Sb10g002570.1 21 SEADAFRRQVDDLvSKTDVLEKRVKEVVDF 50
                   57899******9766666555566666666 PP
      BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegn...YsspeefvkDvrlifnNakaynenkssv 71 
                    +h++++pF +pvd   l ipdY++ii +Pmd+sti++++e++    Y+++ e   Dvrlif Na++yn++++ v
  Sb10g002570.1  92 SHKDAWPFLKPVDVVtLHIPDYHKIITQPMDFSTIQKKMERKDgtcYTNVREICSDVRLIFANAMKYNDDQNVV 165
                    69*******************************************************************98876 PP
Protein Sequence
(Fasta)		MTPANGAPAP AAESVPPEVE SEADAFRRQV DDLVSKTDVL EKRVKEVVDF YDGKKHGSGG 60
RKGGGGGRHG AYSRGMPDLM RQFGVLLKEI TSHKDAWPFL KPVDVVTLHI PDYHKIITQP 120
MDFSTIQKKM ERKDGTCYTN VREICSDVRL IFANAMKYND DQNVVHLMAK SLLEKFEEKW 180
LHFLPKVESE EKRQKEEESK GVAATNTSRE VAIAKLAKDT DDELNQINRK LEELRKMVVH 240
RCRKMTTDEK RKLGAGICHL SPDDLNKALE IVAQDNPSFQ TKAEEVDLDM DAQSETTLWR 300
LKFFVREALE RQANVASGKM DENAKRKREI CNALAKTASK RIKKQP 346
Nucleotide Sequence
(Fasta)		AAAAAGGAAA AAGGAAAACA AAAAAAAAAC CGTCAGAGCG GCGGTCGGCT GTAGTGCAGT 60
TGCAGGTGTT CGCCGGCACA CGCGCGCGGC CGCGAACCCT AGATGACGCC GGCGAACGGC 120
GCCCCAGCGC CGGCAGCGGA GTCTGTCCCC CCCGAGGTGG AGTCGGAGGC CGATGCGTTC 180
CGGCGCCAGG TTGACGACCT CGTCTCGAAG ACCGACGTGC TGGAGAAGCG GGTGAAAGAG 240
GTGGTGGACT TCTATGATGG CAAGAAGCAC GGAAGCGGCG GGCGGAAGGG CGGCGGTGGC 300
GGCAGGCACG GGGCATACTC GAGGGGGATG CCCGACCTTA TGCGCCAGTT CGGCGTGCTT 360
TTGAAAGAGA TCACCTCTCA TAAAGATGCA TGGCCATTTC TGAAGCCGGT GGATGTTGTA 420
ACCCTGCACA TTCCTGACTA TCACAAAATT ATTACCCAAC CTATGGACTT CTCTACCATC 480
CAAAAGAAAA TGGAAAGGAA AGATGGTACC TGTTACACCA ATGTTCGAGA AATATGTTCT 540
GATGTTCGAT TAATTTTTGC CAATGCGATG AAGTACAATG ATGATCAAAA TGTAGTCCAC 600
TTGATGGCTA AATCATTGCT TGAGAAATTT GAAGAGAAGT GGCTCCATTT TCTTCCTAAA 660
GTTGAGAGTG AGGAAAAAAG ACAAAAGGAG GAGGAATCAA AGGGTGTTGC AGCCACAAAT 720
ACTTCTCGAG AAGTTGCAAT CGCAAAATTA GCAAAAGATA CTGATGATGA GCTAAATCAG 780
ATCAATAGGA AGCTGGAGGA ACTCCGGAAA ATGGTGGTTC ACAGATGCAG GAAAATGACC 840
ACAGATGAGA AGAGGAAGCT GGGTGCAGGG ATCTGCCACT TGTCTCCAGA TGATCTTAAC 900
AAGGCGCTAG AAATTGTTGC ACAAGACAAT CCTAGCTTCC AAACTAAAGC AGAAGAAGTG 960
GATCTTGATA TGGATGCCCA GAGTGAGACA ACCCTATGGA GGCTGAAATT CTTTGTGAGG 1020
GAAGCACTGG AACGACAGGC CAACGTTGCC TCTGGGAAGA TGGACGAAAA CGCCAAAAGA 1080
AAGAGGGAGA TATGCAATGC TCTGGCCAAA ACAGCATCGA AACGGATCAA GAAGCAACCC 1140
TAGCCATCTT CCAGATCTTT GACTCGCGTC CTTCTGTGAT TGTTAAGAAG TTTTTTTGGT 1200
AGGAGTAGCC ATTAGCTTTG TGAAAGGATT TCCTGCATTT TTTGTGGAGC TGTGTATATA 1260
GTACACTGTC TGTCCAGTAA CAAGTGATTT CATGTGTAAC CATGAGCTGA TCGCATCGAC 1320
TCTGACCAAA ACAACAAACA TTGTCTCTAC TTGCAATTGC TAGAATGAAA GCCACAACCA 1380
CAATGTGATT GAT 1394
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Zem-0063 GRMZM2G103166_P01 Zea mays 95 2e-165 578
WERAM-Sei-0027 Si006741m Setaria italica 82 2e-142 502
WERAM-Orp-0056 OPUNC06G02290.1 Oryza punctata 76 1e-128 456
WERAM-Orm-0056 OMERI06G02350.2 Oryza meridionalis 76 4e-128 454
WERAM-Orr-0059 ORUFI06G02420.1 Oryza rufipogon 76 2e-127 452
WERAM-Org-0056 ORGLA06G0024300.1 Oryza glaberrima 76 2e-127 452
WERAM-Orb-0058 OBART06G02360.1 Oryza barthii 76 2e-127 452
WERAM-Ori-0070 BGIOSGA022262-PA Oryza indica 76 2e-127 452
WERAM-Orni-0055 ONIVA06G02920.1 Oryza nivara 76 2e-127 452
WERAM-Orbr-0068 OB06G12290.1 Oryza brachyantha 76 4e-126 448
WERAM-Lep-0061 LPERR06G02150.1 Leersia perrieri 76 1e-125 446
WERAM-Brd-0026 BRADI1G51430.1 Brachypodium distachyon 75 1e-124 443
WERAM-Aet-0066 EMT01547 Aegilops tauschii 70 2e-120 429
WERAM-Hov-0061 MLOC_55782.1 Hordeum vulgare 71 8e-119 424
WERAM-Orl-0042 KN538905.1_FGP017 Oryza longistaminata 75 1e-118 423
WERAM-Tru-0017 TRIUR3_07486-P1 Triticum urartu 69 3e-117 419
WERAM-Tra-0011 Traes_1BL_1146A9F7F.1 Triticum aestivum 69 2e-115 412
WERAM-Pot-0094 POPTR_0008s04260.1 Populus trichocarpa 52 1e-91 333
WERAM-Glm-0226 GLYMA17G23240.2 Glycine max 53 2e-91 332
WERAM-Mua-0129 GSMUA_Achr8P29340_001 Musa acuminata 51 3e-90 329
WERAM-Sol-0108 Solyc09g015660.2.1 Solanum lycopersicum 52 5e-84 308
WERAM-Met-0139 KEH25663 Medicago truncatula 57 1e-83 307
WERAM-Amt-0020 ERM94715 Amborella trichopoda 49 2e-82 303
WERAM-Prp-0066 EMJ19316 Prunus persica 51 4e-82 302
WERAM-Viv-0080 VIT_13s0019g03950.t01 Vitis vinifera 47 4e-81 298
WERAM-Thc-0119 EOY18575 Theobroma cacao 50 8e-81 298
WERAM-Arl-0073 fgenesh2_kg.4__ 1513__ AT2G34900.1 Arabidopsis lyrata 51 3e-71 266
WERAM-Art-0052 AT2G34900.1 Arabidopsis thaliana 51 5e-71 265
WERAM-Brr-0066 Bra012810.1-P Brassica rapa 44 2e-70 263
WERAM-Bro-0136 Bo7g102660.1 Brassica oleracea 43 5e-68 255
WERAM-Sot-0050 PGSC0003DMT400044320 Solanum tuberosum 50 3e-67 253
WERAM-Php-0089 PP1S353_39V6.1 Physcomitrella patens 40 4e-51 199
WERAM-Sem-0080 EFJ19669 Selaginella moellendorffii 38 1e-43 174
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 31 9e-26 115
WERAM-Anp-0056 ENSAPLP00000006179.1 Anas platyrhynchos 30 2e-21 100
WERAM-Xim-0143 ENSXMAP00000011561.1 Xiphophorus maculatus 44 1e-20 97.8
WERAM-Gam-0156 ENSGMOP00000015464.1 Gadus morhua 31 2e-20 97.8
WERAM-Pof-0204 ENSPFOP00000016934.2 Poecilia formosa 44 3e-20 97.1
WERAM-Ors-0069 OS07T0507700-01 Oryza sativa 45 5e-20 95.9
WERAM-Osl-0042 ABO96608 Ostreococcus lucimarinus 29 5e-20 95.9
WERAM-Orn-0225 ENSONIP00000024235.1 Oreochromis niloticus 48 8e-20 95.1
WERAM-Orla-0148 ENSORLP00000017453.1 Oryzias latipes 45 1e-19 95.1
WERAM-Chr-0016 EDP01011 Chlamydomonas reinhardtii 31 4e-19 92.8
WERAM-Gaa-0037 ENSGACP00000005692.1 Gasterosteus aculeatus 45 1e-18 90.9
WERAM-Tar-0033 ENSTRUP00000007860.1 Takifugu rubripes 36 2e-18 90.9
WERAM-Asm-0076 ENSAMXP00000007951.1 Astyanax mexicanus 44 2e-18 90.5
WERAM-Anc-0036 ENSACAP00000004148.2 Anolis carolinensis 49 3e-18 90.1
Created Date 25-Jun-2016