WERAM Information

Tag Content
WERAM ID WERAM-Bro-0003
Ensembl Protein ID Bo01087s020.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo01087s020 Bo01087s020.1 Bo01087s020.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader Tudor 3.10e-08 35.3 45 452
Organism Brassica oleracea
Domain Profile
  Me_Reader Tudor
      Tudor.txt 16 GyfYsgkiVvkghrvesgeey 36
                   G +Y g++V    +v+s++++
  Bo01087s020.1 45 GSWYLGEVV----AVPSSDST 61
                   79******7....77776654 PP
      Tudor.txt   3 kvGlrVvakwssdGyfYsgki 23 
                     vG++V+a +s    +++g++
  Bo01087s020.1 103 AVGEDVDAFYS--DGWWEGTV 121
                    59*********..66*****9 PP
      Tudor.txt  16 GyfYsgkiVvkghrvesgeeyysikyedqrk 46 
                    G ++s+k++      ++ e  y+++y d r+
  Bo01087s020.1 210 GSWFSAKVI-----EHVDEDKYLVEYRDLRE 235
                    69******7.....4578999****999776 PP
      Tudor.txt   2 skvGlrVvakwssdGyfYsgki.......................................................................... 23 
                    + vG++++a ++   +++ g +                                                                          
  Bo01087s020.1 263 FAVGDKIDAFYN--DAWWVGDViesmkdgivgvcfrytgekmrfgrhglrlhrdwingtwqlplkrgemkratkkvpcdrnvrpkkaidkehfsvg 356
                    679********9..9*******99999999999999999999999999999999999999999777777777777777777666666666666655 PP
      Tudor.txt  24 ....Vvkghrve..sgeeyy...sikyedqrkwy 48 
                        V    +ve   +++++   +i+y + +kw 
  Bo01087s020.1 357 dpveV---SSVEegFEDSWFlakVIEYRGTDKWL 387
                    55333...44444455555588889999999984 PP
      Tudor.txt   7 rVvakwssdGyfYsgkiVvkghrvesgeeyy 37 
                    +V+a ++ d  ++ g +    ++v ++ + y
  Bo01087s020.1 429 EVDALYN-D-GWWFGVV----KKVLAK-SNY 452
                    7999999.5.5888988....555544.444 PP
Protein Sequence
(Fasta)		MSSRRRQSTQ RKKAPESSVT PIRLPPFLKP GAAVEISSDE AGFRGSWYLG EVVAVPSSDS 60
TTKCEVEYTT LFLDKEGRKR LKEVVDAAQL RPPVPAMSER DVAVGEDVDA FYSDGWWEGT 120
VTEVLGDGRF SVYFRASKEQ IRFRRDELRF HREWVNGAWK PPIEEREEEE EEEEDLLSRV 180
DPETARGIAK QMFSIGTIVE VSSDEEGFKG SWFSAKVIEH VDEDKYLVEY RDLREENGIE 240
PLKEEADFLH IRPPPPTDED VDFAVGDKID AFYNDAWWVG DVIESMKDGI VGVCFRYTGE 300
KMRFGRHGLR LHRDWINGTW QLPLKRGEMK RATKKVPCDR NVRPKKAIDK EHFSVGDPVE 360
VSSVEEGFED SWFLAKVIEY RGTDKWLVEY EKLKAEDGKE PLREEVNVFQ IRPRPQETVM 420
VNPFEKLDEV DALYNDGWWF GVVKKVLAKS NYLVHFPKTD EVLKFHVSRL RPHQEWIDGK 480
WIASSKT 487
Nucleotide Sequence
(Fasta)		ATGTCTTCAC GGCGTCGCCA ATCTACACAG AGGAAGAAAG CTCCGGAGAG CTCCGTAACT 60
CCGATTCGCC TCCCTCCCTT TCTAAAACCC GGCGCCGCCG TCGAGATCAG CTCCGACGAG 120
GCCGGTTTCC GCGGATCGTG GTACCTGGGA GAGGTCGTCG CCGTCCCATC CTCAGACTCC 180
ACCACCAAAT GCGAGGTGGA GTACACGACG CTGTTCTTGG ACAAAGAAGG GAGGAAGCGG 240
CTCAAGGAGG TCGTCGACGC GGCTCAGCTG CGTCCTCCGG TGCCGGCGAT GTCCGAGAGG 300
GATGTCGCGG TGGGGGAAGA CGTGGACGCG TTTTACAGTG ATGGTTGGTG GGAAGGGACG 360
GTGACGGAGG TTTTGGGTGA TGGGAGGTTT AGTGTTTACT TCAGGGCTTC TAAGGAGCAG 420
ATTCGGTTTC GGAGAGATGA GTTACGGTTT CATCGGGAGT GGGTTAACGG CGCGTGGAAG 480
CCGCCGATTG AGGAAAGGGA AGAGGAGGAG GAGGAGGAAG AGGATCTTTT ATCCCGAGTG 540
GATCCGGAAA CTGCAAGAGG AATCGCGAAA CAAATGTTCT CCATTGGCAC AATTGTTGAG 600
GTTAGCAGCG ATGAGGAAGG GTTCAAGGGG TCTTGGTTTT CAGCTAAAGT CATTGAACAC 660
GTTGACGAAG ACAAGTACCT TGTTGAGTAC CGAGACTTGA GAGAAGAAAA CGGCATCGAG 720
CCTTTGAAAG AAGAAGCCGA CTTTCTGCAC ATAAGGCCAC CGCCACCGAC TGATGAGGAT 780
GTAGATTTTG CCGTTGGGGA CAAGATTGAT GCGTTTTACA ATGACGCCTG GTGGGTAGGT 840
GATGTCATAG AGAGTATGAA GGATGGAATC GTTGGTGTCT GCTTCAGGTA CACAGGAGAA 900
AAGATGCGGT TTGGAAGACA TGGCCTTCGT CTGCATAGAG ACTGGATTAA CGGGACCTGG 960
CAGCTACCAC TGAAACGAGG AGAGATGAAG AGGGCAACAA AGAAAGTTCC GTGTGATCGG 1020
AACGTGAGAC CTAAGAAAGC AATCGACAAG GAACATTTCA GCGTTGGAGA TCCAGTCGAG 1080
GTTAGCAGTG TTGAAGAAGG ATTTGAAGAT TCTTGGTTCC TCGCAAAGGT TATTGAATAC 1140
AGAGGAACGG ACAAATGGCT AGTGGAATAC GAGAAGTTGA AAGCGGAAGA TGGGAAAGAG 1200
CCATTGAGAG AAGAGGTTAA TGTTTTTCAG ATAAGGCCTC GGCCACAAGA GACGGTCATG 1260
GTTAATCCGT TCGAGAAGCT TGACGAAGTT GATGCATTGT ATAATGATGG ATGGTGGTTC 1320
GGGGTGGTTA AAAAGGTTCT TGCAAAGTCG AACTACTTGG TTCATTTCCC GAAAACAGAC 1380
GAGGTGCTCA AGTTTCATGT TTCTCGGCTA AGGCCACATC AGGAATGGAT TGATGGCAAG 1440
TGGATAGCAT CTTCAAAGAC TTAA 1465
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0049 fgenesh2_kg.1__ 977__ AT1G09320.1 Arabidopsis lyrata 72 0.0 700
WERAM-Art-0008 AT1G09320.1 Arabidopsis thaliana 70 0.0 687
WERAM-Brr-0095 Bra018567.1-P Brassica rapa 70 0.0 665
WERAM-Pot-0056 POPTR_0005s01460.1 Populus trichocarpa 46 6e-70 262
WERAM-Sot-0045 PGSC0003DMT400041247 Solanum tuberosum 41 3e-61 233
WERAM-Prp-0125 EMJ22805 Prunus persica 38 1e-48 191
WERAM-Thc-0070 EOY11696 Theobroma cacao 47 4e-42 169
WERAM-Amt-0093 ERN04860 Amborella trichopoda 32 2e-11 67.8
WERAM-Glm-0133 GLYMA11G27622.1 Glycine max 32 8e-10 62.8
WERAM-Sol-0109 Solyc09g031580.2.1 Solanum lycopersicum 35 2e-09 61.6
WERAM-Met-0088 KEH34313 Medicago truncatula 31 7e-08 56.2
Created Date 25-Jun-2016