WERAM Information

Tag Content
WERAM ID WERAM-Art-0052
Ensembl Protein ID AT2G34900.1
Uniprot Accession Q84XV2; GTE1_ARATH; O64754; Q56W05
Genbank Protein ID NP_181036.2
Protein Name Transcription factor GTE1
Genbank Nucleotide ID NM_129043.4
Gene Name GTE1;IMB1;At2g34900;F19I3.13
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G34900 AT2G34900.1 AT2G34900.1
AT2G34900 AT2G34900.2 AT2G34900.2
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 4.30e-27 94.8 123 194
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)		 Transcription activator that plays a role in the promotion of seed germination by both negatively and positively regulating the abscisic acid (ABA) and phytochrome A (phyA) transduction pathways, respectively.
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegnYsspeefvkDvrlifnNakaynenkssvq 72 
                  +h+ ++pF epvd + l ++dYy++i++PmdL tik+++e+ +Ys++ e ++Dvrl+f+Na+ yne+k++v+
  AT2G34900.1 123 QHKWAWPFLEPVDVKgLGLHDYYKVIEKPMDLGTIKKKMESSEYSNVREIYADVRLVFKNAMRYNEEKEDVY 194
                  799*******************************************************************97 PP
Protein Sequence
(Fasta)		MSVHVKEEPV LVPNCDVENT ELAVFNGNGE SELENFGTCV DEITDRVNQL EQKVVEVEHF 60
YSTKDGAAQT NTSKSNSGGK KIAISQPNNS KGNSAGKEKS KGKHVSSPDL MRQFATMFRQ 120
IAQHKWAWPF LEPVDVKGLG LHDYYKVIEK PMDLGTIKKK MESSEYSNVR EIYADVRLVF 180
KNAMRYNEEK EDVYVMAESL LEKFEEKWLL IMPKLVEEEK KQVDEEAEKH ANKQLTMEAA 240
QAEMARDLSN ELYEIDLQLE KLRESVVQRC RKLSTQEKKG LSAALGRLSP EDLSKALKMV 300
SESNPSFPAG APEVELDIDV QTDVTLWRLK VFVQEALKAA NKSSGGTNAQ NNNNTGTGEI 360
NKNNAKRRRE ISDAINKASI KRAKKA 386
Nucleotide Sequence
(Fasta)		AGCTGCTGTC TCTTCCGTCT TCGTCCTCCG ACCTCTGTCT TTCTTCTGAT CCTTCGAAAA 60
AGCTCTCGTG AGTCACTACT CTTCTCTAAT GTCTGTACAT GTCAAGGAAG AACCTGTGCT 120
TGTTCCAAAC TGCGATGTCG AGAATACAGA GCTTGCAGTT TTCAATGGAA ATGGAGAAAG 180
TGAGCTTGAG AATTTTGGGA CTTGCGTAGA TGAGATAACA GATAGAGTGA ATCAGCTTGA 240
GCAAAAAGTT GTGGAGGTCG AACACTTTTA CTCTACAAAA GATGGAGCTG CTCAAACTAA 300
CACTTCTAAG AGTAACTCGG GCGGGAAGAA GATCGCTATT TCTCAACCAA ACAACTCGAA 360
GGGTAACTCG GCCGGGAAAG AAAAATCAAA GGGAAAACAT GTTTCCAGCC CTGACCTTAT 420
GCGTCAATTT GCAACAATGT TTCGTCAGAT TGCTCAACAT AAATGGGCAT GGCCGTTCTT 480
GGAGCCTGTT GATGTTAAAG GACTTGGACT ACATGATTAT TACAAGGTTA TAGAGAAGCC 540
AATGGACTTG GGAACAATTA AAAAAAAAAT GGAGAGTTCG GAGTATAGCA ATGTCAGGGA 600
GATATATGCC GATGTTAGAC TAGTTTTCAA GAACGCGATG AGATACAATG AAGAAAAAGA 660
AGATGTTTAT GTGATGGCTG AATCTCTTCT GGAGAAATTT GAGGAGAAAT GGCTCCTGAT 720
AATGCCTAAA CTTGTGGAGG AGGAAAAGAA ACAAGTAGAC GAAGAAGCGG AGAAGCATGC 780
CAATAAGCAG CTTACAATGG AGGCTGCACA AGCGGAAATG GCTAGGGATT TAAGCAACGA 840
ACTATATGAG ATTGATCTGC AGCTGGAGAA ACTCCGGGAA TCAGTAGTTC AGAGATGCAG 900
AAAACTGTCC ACTCAAGAAA AGAAAGGACT TTCTGCAGCT CTAGGTCGTC TCTCACCTGA 960
GGATCTGTCT AAGGCGTTAA AAATGGTTTC AGAGAGCAAC CCGAGTTTCC CGGCTGGAGC 1020
ACCAGAAGTC GAGCTTGACA TTGATGTTCA GACTGACGTT ACATTGTGGA GACTGAAGGT 1080
GTTTGTGCAA GAAGCATTGA AAGCAGCTAA CAAAAGCTCT GGAGGAACAA ACGCTCAAAA 1140
CAATAACAAT ACTGGAACTG GAGAGATCAA CAAGAACAAT GCAAAAAGAC GGAGAGAGAT 1200
CTCTGATGCA ATCAATAAAG CTTCAATTAA AAGAGCTAAG AAAGCTTGAA TCTCTCTCTA 1260
TCTCTTGATG TGTTTATTGA TACAGAAGGA ACAAGAGTTT GGTGAACACC AATCTAAATT 1320
AGAAACTTTC CAGTTCCATT GCGCATGTTG CTTCAAATGT TGAGCACAAT GTAAAAAAGA 1380
ATGAATGGGA AAAAAATCTG AGCTATAGAG GAGATATAAA GAAGACTGCT TGAGGGAGAA 1440
ATTCTGACAA ATCTTCTAAT AAAATCTTCA GTTTGAGAGA TCTTTGGTGT GTTGAACGTT 1500
TCTTCGATTT CATTACCTTA AACCTCGGCA CTTATAATTT AAAATCAATT TTTAAAAATG 1560
ATAATATGA
Sequence Source Ensembl
Keyword

KW-0010--Activator
KW-0025--Alternative splicing
KW-0103--Bromodomain
KW-0181--Complete proteome
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0804--Transcription
KW-0805--Transcription regulation
--
Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
IPR017413--GTE1/GTE6
IPR027353--NET_dom
PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
PS51525--NET
Pfam

PF17035--BET
PF00439--Bromodomain
Gene Ontology

GO:0005634--C:nucleus
GO:0010030--P:positive regulation of seed germination
GO:0045893--P:positive regulation of transcription, DNA-templated
GO:0006351--P:transcription, DNA-templated
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0073 fgenesh2_kg.4__ 1513__ AT2G34900.1 Arabidopsis lyrata 97 0.0 704
WERAM-Brr-0024 Bra005383.1-P Brassica rapa 83 2e-168 588
WERAM-Bro-0068 Bo4g039190.1 Brassica oleracea 82 4e-164 574
WERAM-Thc-0018 EOX96796 Theobroma cacao 58 1e-107 387
WERAM-Glm-0226 GLYMA17G23240.2 Glycine max 53 5e-99 358
WERAM-Pot-0094 POPTR_0008s04260.1 Populus trichocarpa 54 5e-96 348
WERAM-Sol-0108 Solyc09g015660.2.1 Solanum lycopersicum 51 6e-95 345
WERAM-Prp-0066 EMJ19316 Prunus persica 53 5e-93 338
WERAM-Viv-0080 VIT_13s0019g03950.t01 Vitis vinifera 54 7e-93 338
WERAM-Met-0179 AET03443 Medicago truncatula 50 2e-88 323
WERAM-Orp-0056 OPUNC06G02290.1 Oryza punctata 49 4e-83 305
WERAM-Amt-0020 ERM94715 Amborella trichopoda 48 8e-83 304
WERAM-Mua-0129 GSMUA_Achr8P29340_001 Musa acuminata 46 1e-82 304
WERAM-Orni-0055 ONIVA06G02920.1 Oryza nivara 49 1e-82 304
WERAM-Orr-0059 ORUFI06G02420.1 Oryza rufipogon 49 1e-82 303
WERAM-Org-0056 ORGLA06G0024300.1 Oryza glaberrima 49 1e-82 303
WERAM-Orb-0058 OBART06G02360.1 Oryza barthii 49 1e-82 303
WERAM-Ori-0070 BGIOSGA022262-PA Oryza indica 49 2e-82 303
WERAM-Orm-0056 OMERI06G02350.2 Oryza meridionalis 48 5e-82 302
WERAM-Sot-0050 PGSC0003DMT400044320 Solanum tuberosum 55 2e-81 300
WERAM-Orbr-0068 OB06G12290.1 Oryza brachyantha 46 7e-80 295
WERAM-Orl-0042 KN538905.1_FGP017 Oryza longistaminata 50 2e-79 293
WERAM-Brd-0026 BRADI1G51430.1 Brachypodium distachyon 47 2e-77 286
WERAM-Sei-0027 Si006741m Setaria italica 46 2e-76 283
WERAM-Tra-0006 Traes_1AL_E5E49D129.1 Triticum aestivum 45 3e-76 282
WERAM-Tru-0010 TRIUR3_05662-P1 Triticum urartu 45 4e-76 282
WERAM-Hov-0061 MLOC_55782.1 Hordeum vulgare 45 2e-75 280
WERAM-Aet-0066 EMT01547 Aegilops tauschii 45 9e-75 278
WERAM-Lep-0061 LPERR06G02150.1 Leersia perrieri 44 2e-72 270
WERAM-Zem-0063 GRMZM2G103166_P01 Zea mays 44 5e-71 265
WERAM-Sob-0128 Sb10g002570.1 Sorghum bicolor 44 6e-71 265
WERAM-Php-0089 PP1S353_39V6.1 Physcomitrella patens 43 8e-60 228
WERAM-Sem-0080 EFJ19669 Selaginella moellendorffii 43 4e-48 189
WERAM-Orgl-0002 OGLUM01G08180.1 Oryza glumaepatula 36 2e-31 134
WERAM-Osl-0042 ABO96608 Ostreococcus lucimarinus 33 9e-25 112
WERAM-Ors-0020 OS02T0250300-01 Oryza sativa 49 1e-24 111
WERAM-Xim-0143 ENSXMAP00000011561.1 Xiphophorus maculatus 45 5e-24 109
WERAM-Tar-0198 ENSTRUP00000040915.1 Takifugu rubripes 49 5e-24 109
WERAM-Ten-0035 ENSTNIP00000006103.1 Tetraodon nigroviridis 49 5e-24 109
WERAM-Pof-0204 ENSPFOP00000016934.2 Poecilia formosa 45 5e-24 109
WERAM-Gaa-0037 ENSGACP00000005692.1 Gasterosteus aculeatus 51 5e-23 105
WERAM-Drm-0012 FBpp0071074 Drosophila melanogaster 50 5e-23 105
WERAM-Orn-0042 ENSONIP00000004818.1 Oreochromis niloticus 40 6e-23 105
WERAM-Sah-0133 ENSSHAP00000014254.1 Sarcophilus harrisii 52 7e-23 105
WERAM-Lac-0022 ENSLACP00000003855.1 Latimeria chalumnae 51 8e-23 105
WERAM-Mod-0096 ENSMODP00000014906.4 Monodelphis domestica 53 1e-22 104
WERAM-Pem-0074 ENSPMAP00000008062.1 Petromyzon marinus 35 2e-22 104
WERAM-Eqc-0123 ENSECAP00000013753.1 Equus caballus 56 2e-22 104
WERAM-Myl-0068 ENSMLUP00000005696.2 Myotis lucifugus 42 2e-22 103
WERAM-Orla-0106 ENSORLP00000012941.1 Oryzias latipes 51 2e-22 103
WERAM-Caj-0188 ENSCJAP00000032249.2 Callithrix jacchus 42 4e-22 103
WERAM-Dar-0055 ENSDARP00000038787.6 Danio rerio 46 4e-22 102
WERAM-Otg-0019 ENSOGAP00000000893.2 Otolemur garnettii 44 5e-22 102
WERAM-Leo-0065 ENSLOCP00000008328.1 Lepisosteus oculatus 51 5e-22 102
WERAM-Anp-0056 ENSAPLP00000006179.1 Anas platyrhynchos 29 6e-22 102
Created Date 25-Jun-2016