WERAM Information

Tag Content
WERAM ID WERAM-Art-0021
Ensembl Protein ID AT1G58025.3
Uniprot Accession F4I9P9; F4I9P9_ARATH
Genbank Protein ID NP_001185258.1
Protein Name DNA-binding bromodomain-containing protein
Genbank Nucleotide ID NM_001198329.1
Gene Name At1g58025;BRD5
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT1G58025 AT1G58025.3 AT1G58025.3
AT1G58025 AT1G58025.1 AT1G58025.1
AT1G58025 AT1G58025.2 AT1G58025.2
Details
Type Family Domain Substrates AA References (PMIDs)
Ac_Reader Bromodomain Bromodomain K 12466527
Status Reviewed
Classification
Type Family E-value Score Start End
Ac_Reader Bromodomain 3.60e-21 75.8 228 298
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)
Domain Profile
  Ac_Reader Bromodomain
    BROMO.txt   2 ehevsepFrepvdpq.leipdYydiikePmdLstikerleegn.YsspeefvkDvrlifnNakaynenkss 70 
                  ++e ++pF+ pv+p+ l ipdY+diik+Pmd+ ti ++ e+gn Y + e+++kDv+ i+nN+ +yn++++ 
  AT1G58025.3 228 KMEAADPFNVPVNPEaLGIPDYFDIIKTPMDFGTICNNFEKGNkYMNSEDVYKDVNYIWNNCSKYNKKGDY 298
                  67899************************************999***********************9875 PP
Protein Sequence
(Fasta)		MKRKRGHKKG KKSKTINEQG NLNESTENAE NQTSEHSSEA PVECENSELE SKMEVDAPSP 60
IAGSVDLADN IAAKSVARVK VKLKTSKAPE PNETLRDDID KSSSQAVLEK PVVPVEKKEE 120
FVPRLPERKP VFLNVYRKTK GIRIKSSKAV DGSSSVTEKS ATDTVKVQDV VVGQKDTKTS 180
EENSQASKKE AEIATISLQK EEKKTDQNLR YNKQELEDSL IVIKKIMKME AADPFNVPVN 240
PEALGIPDYF DIIKTPMDFG TICNNFEKGN KYMNSEDVYK DVNYIWNNCS KYNKKGDYIV 300
DLMKRVKKNF MKYWTSAGLY TEQSAAENTE DGGKASTKQK SHKRHGRHHK SDCMCAICVL 360
KRRKRERERD SGAQEESSPA GSPSVDNSSV NMGEDMDIDV DKKPEQEKTE IVELDSPVSK 420
TQRVIENKQE VEEEENVEVE SENKTKANVE DKTQSIDRSM EETGDEPVNS AAEKLVVLAS 480
LEGPKSTQNE EEEKEKRLQE QKKRLELERK EWRMKMQEKF QVRNPQLLSL CETLFPNDNN 540
HNSVWNGPHS LFRRRGGSNR SSALHKAVES LMK 573
Nucleotide Sequence
(Fasta)		ATCTCGGGTC TAAAAACTAA TAATCGACGT TCGAAGAATT TGTGAGCCAG TAGAAGCGCC 60
GGTCTACTTA AAAATTCAAT TGGTAAAATC CACTTTCCCT CCTAACTTTT TCTAATTTTT 120
TGAATCTCCC TCTCTTCTCT TCTTCCTCTC CACCAATCTC TTCGATTTTC TCTGGTAAAT 180
TACGACGACG ACGTAGATTT AGGGTTTCTT ATTCTGATTT TAAGATTTTG TAGCCCTTTG 240
GTTGTTGCAG GAGTCTCTTC TAGCTTCTCT CTGTGTGATA TCTACGTACG GGGTTGATAG 300
TATCGTTGAA GAGTATGAAG CGTAAAAGAG GACATAAGAA AGGGAAGAAG TCTAAGACTA 360
TCAATGAACA AGGGAACTTG AACGAGTCAA CTGAAAACGC GGAGAATCAA ACCTCTGAGC 420
ATAGTTCTGA AGCTCCTGTT GAGTGTGAGA ATAGTGAACT TGAATCTAAA ATGGAGGTTG 480
ATGCTCCTTC ACCTATTGCT GGAAGTGTAG ATCTAGCTGA TAATATAGCG GCCAAGTCTG 540
TTGCGCGTGT TAAGGTTAAA TTGAAGACTT CGAAAGCACC TGAACCCAAT GAGACATTGC 600
GTGATGATAT CGATAAGAGT AGTTCTCAAG CGGTGTTAGA AAAACCTGTT GTGCCTGTTG 660
AGAAAAAGGA GGAATTTGTT CCTCGTTTGC CTGAGAGGAA GCCGGTGTTT CTGAATGTTT 720
ACAGGAAAAC TAAAGGTATA AGGATAAAGT CTTCGAAGGC GGTTGATGGG TCTAGCTCGG 780
TTACTGAGAA GAGTGCTACT GATACTGTCA AGGTTCAGGA TGTGGTAGTA GGTCAGAAGG 840
ATACGAAAAC GTCTGAGGAG AATTCTCAAG CTAGTAAGAA AGAGGCGGAA ATTGCAACGA 900
TTTCTTTGCA GAAAGAGGAG AAGAAGACTG ATCAAAATTT ACGATACAAT AAGCAAGAAC 960
TGGAAGATTC TCTTATTGTG ATCAAGAAGA TTATGAAGAT GGAGGCTGCT GATCCTTTTA 1020
ATGTTCCTGT CAATCCAGAA GCTCTTGGAA TTCCTGACTA TTTCGATATT ATCAAGACAC 1080
CTATGGATTT TGGAACAATA TGCAACAATT TTGAGAAAGG CAACAAGTAT ATGAATTCTG 1140
AGGATGTTTA CAAGGATGTC AACTACATTT GGAATAACTG TTCCAAGTAC AATAAGAAAG 1200
GTGATTATAT TGTGGATCTG ATGAAGCGAG TGAAGAAAAA TTTCATGAAG TACTGGACTT 1260
CAGCAGGGTT GTATACTGAG CAATCAGCAG CAGAAAATAC AGAAGATGGT GGAAAGGCAT 1320
CCACAAAGCA GAAGAGTCAT AAACGCCATG GAAGGCACCA CAAGAGTGAT TGCATGTGTG 1380
CGATATGTGT TTTGAAGCGT CGTAAAAGAG AACGTGAACG AGATTCTGGA GCTCAAGAGG 1440
AGTCTTCACC TGCGGGAAGT CCGTCTGTGG ATAATTCATC AGTAAACATG GGTGAGGACA 1500
TGGATATTGA TGTTGACAAG AAACCTGAAC AAGAAAAAAC AGAAATCGTG GAACTAGATA 1560
GTCCGGTGTC AAAAACACAA AGAGTGATTG AAAACAAACA AGAGGTGGAG GAAGAGGAAA 1620
ACGTCGAAGT GGAGAGTGAA AATAAAACCA AAGCTAATGT AGAGGACAAG ACTCAGTCGA 1680
TTGATAGATC AATGGAAGAG ACTGGCGATG AGCCTGTGAA TAGTGCTGCA GAGAAATTGG 1740
TTGTTTTAGC TTCCCTTGAA GGTCCAAAAT CGACTCAGAA TGAGGAAGAA GAGAAGGAAA 1800
AACGACTTCA AGAGCAAAAG AAACGGCTGG AGTTAGAGCG TAAAGAATGG AGAATGAAGA 1860
TGCAAGAAAA GTTCCAAGTC AGAAACCCGC AGCTTCTAAG TCTCTGTGAA ACTCTCTTCC 1920
CTAATGACAA CAACCACAAT TCCGTATGGA ACGGACCTCA CTCACTGTTT AGACGTCGCG 1980
GAGGTTCAAA TCGTAGTAGT GCTTTACACA AAGCAGTTGA GTCACTGATG AAGTAGTAAG 2040
GATTCAAAAT GTAACATAAG TGTTTAGCTA TTCGTTTTAC CTGTTTGTTA CACTCAACAC 2100
CAATCACAAT AAGCATCTTT GTCAATGAAA AC 2133
Sequence Source Ensembl
Keyword

KW-0103--Bromodomain
KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-1185--Reference proteome
--
Interpro

IPR001487--Bromodomain
IPR018359--Bromodomain_CS
PROSITE

PS00633--BROMODOMAIN_1
PS50014--BROMODOMAIN_2
Pfam

PF00439--Bromodomain
Gene Ontology

GO:0003677--F:DNA binding
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0055 fgenesh2_kg.2__ 579__ AT1G58025.1 Arabidopsis lyrata 82 0.0 783
WERAM-Bro-0013 Bo1g087730.1 Brassica oleracea 67 5e-168 588
WERAM-Brr-0175 Bra035468.1-P Brassica rapa 65 1e-159 560
WERAM-Thc-0020 EOX97064 Theobroma cacao 45 1e-92 337
WERAM-Prp-0048 EMJ23264 Prunus persica 40 1e-78 291
WERAM-Met-0037 AES63176 Medicago truncatula 47 4e-72 270
WERAM-Glm-0147 GLYMA12G28818.1 Glycine max 44 1e-68 258
WERAM-Pot-0054 POPTR_0004s23240.1 Populus trichocarpa 59 5e-66 249
WERAM-Sol-0020 Solyc01g103570.2.1 Solanum lycopersicum 35 1e-61 234
WERAM-Viv-0075 VIT_12s0035g00950.t01 Vitis vinifera 48 3e-59 227
WERAM-Sob-0097 Sb07g000993.1 Sorghum bicolor 55 3e-57 220
WERAM-Zem-0046 GRMZM2G059432_P01 Zea mays 57 1e-56 218
WERAM-Sei-0048 Si013430m Setaria italica 56 2e-55 214
WERAM-Lep-0086 LPERR08G00940.1 Leersia perrieri 47 2e-55 214
WERAM-Sot-0078 PGSC0003DMT400064124 Solanum tuberosum 42 1e-54 211
WERAM-Mua-0111 GSMUA_Achr7P23500_001 Musa acuminata 43 3e-54 210
WERAM-Orbr-0093 OB08G10800.1 Oryza brachyantha 60 6e-53 206
WERAM-Orni-0063 ONIVA06G17500.1 Oryza nivara 61 9e-53 205
WERAM-Orgl-0083 OGLUM08G00740.1 Oryza glumaepatula 61 1e-52 205
WERAM-Ors-0077 OS08T0109500-01 Oryza sativa 61 1e-52 205
WERAM-Ori-0095 BGIOSGA027859-PA Oryza indica 61 1e-52 205
WERAM-Org-0086 ORGLA08G0000700.1 Oryza glaberrima 61 1e-52 205
WERAM-Orp-0082 OPUNC08G00660.1 Oryza punctata 61 1e-52 204
WERAM-Orb-0086 OBART08G00690.1 Oryza barthii 60 1e-52 204
WERAM-Brd-0072 BRADI3G13380.1 Brachypodium distachyon 41 2e-52 204
WERAM-Orl-0028 KN538777.1_FGP017 Oryza longistaminata 59 2e-52 204
WERAM-Tra-0325 Traes_7DL_C12607A37.1 Triticum aestivum 53 3e-51 200
WERAM-Amt-0076 ERN20021 Amborella trichopoda 65 9e-50 195
WERAM-Aet-0068 EMT29375 Aegilops tauschii 60 7e-47 186
WERAM-Tru-0026 TRIUR3_14164-P1 Triticum urartu 59 2e-46 184
WERAM-Orr-0089 ORUFI08G00720.1 Oryza rufipogon 57 5e-45 179
WERAM-Sem-0099 EFJ38073 Selaginella moellendorffii 48 3e-32 137
WERAM-Php-0021 PP1S143_150V6.1 Physcomitrella patens 45 3e-26 117
WERAM-Orla-0106 ENSORLP00000012941.1 Oryzias latipes 39 6e-18 90.1
WERAM-Cii-0085 ENSCINP00000034825.1 Ciona intestinalis 41 2e-16 85.5
WERAM-Tar-0198 ENSTRUP00000040915.1 Takifugu rubripes 40 2e-16 85.1
WERAM-Orn-0021 ENSONIP00000002329.1 Oreochromis niloticus 41 2e-16 84.7
WERAM-Orc-0130 ENSOCUP00000011195.2 Oryctolagus cuniculus 35 2e-16 84.7
WERAM-Anp-0078 ENSAPLP00000009547.1 Anas platyrhynchos 42 2e-16 84.7
WERAM-Mim-0129 ENSMICP00000013010.1 Microcebus murinus 35 3e-16 84.3
WERAM-Cap-0011 ENSCPOP00000001274.2 Cavia porcellus 35 3e-16 84.3
WERAM-Aim-0034 ENSAMEP00000002443.1 Ailuropoda melanoleuca 42 3e-16 84.3
WERAM-Pof-0102 ENSPFOP00000009161.2 Poecilia formosa 40 3e-16 84.3
WERAM-Xim-0169 ENSXMAP00000013871.1 Xiphophorus maculatus 40 3e-16 84.3
WERAM-Ova-0027 ENSOARP00000003891.1 Ovis aries 42 3e-16 84.3
WERAM-Chs-0069 ENSCSAP00000002413.1 Chlorocebus sabaeus 35 3e-16 84.3
WERAM-Paa-0190 ENSPANP00000010376.1 Papio anubis 35 3e-16 84.3
WERAM-Ocp-0044 ENSOPRP00000003823.1 Ochotona princeps 35 3e-16 84.3
WERAM-Ten-0049 ENSTNIP00000004900.1 Tetraodon nigroviridis 41 3e-16 84.3
WERAM-Poa-0084 ENSPPYP00000010837.2 Pongo abelii 35 4e-16 84.0
WERAM-Nol-0052 ENSNLEP00000006353.1 Nomascus leucogenys 35 4e-16 84.0
WERAM-Mum-0055 ENSMUSP00000113070.1 Mus musculus 35 4e-16 84.0
WERAM-Hos-0138 ENSP00000263377.1 Homo sapiens 35 4e-16 84.0
WERAM-Loa-0211 ENSLAFP00000026806.1 Loxodonta africana 41 4e-16 84.0
WERAM-Gog-0122 ENSGGOP00000010164.2 Gorilla gorilla 35 4e-16 84.0
WERAM-Ptv-0180 ENSPVAP00000015952.1 Pteropus vampyrus 42 4e-16 84.0
WERAM-Mam-0196 ENSMMUP00000028168.2 Macaca mulatta 35 4e-16 84.0
WERAM-Ran-0040 ENSRNOP00000008963.6 Rattus norvegicus 35 4e-16 84.0
WERAM-Cis-0028 ENSCSAVP00000005883.1 Ciona savignyi 40 4e-16 84.0
WERAM-Pat-0089 ENSPTRP00000018122.4 Pan troglodytes 35 5e-16 83.6
WERAM-Mup-0183 ENSMPUP00000015981.1 Mustela putorius furo 42 5e-16 83.6
WERAM-Eqc-0187 ENSECAP00000019958.1 Equus caballus 42 5e-16 83.6
WERAM-Caj-0016 ENSCJAP00000003945.2 Callithrix jacchus 35 5e-16 83.6
WERAM-Dio-0017 ENSDORP00000002078.1 Dipodomys ordii 42 5e-16 83.6
WERAM-Sus-0153 ENSSSCP00000019596.1 Sus scrofa 42 5e-16 83.6
WERAM-Bot-0030 ENSBTAP00000003242.5 Bos taurus 42 5e-16 83.6
WERAM-Otg-0016 ENSOGAP00000000748.2 Otolemur garnettii 35 5e-16 83.6
WERAM-Gaga-0127 ENSGALP00000035122.2 Gallus gallus 42 5e-16 83.6
WERAM-Mod-0130 ENSMODP00000018187.4 Monodelphis domestica 42 6e-16 83.6
WERAM-Caf-0165 ENSCAFP00000023676.4 Canis familiaris 42 6e-16 83.2
WERAM-Fec-0010 ENSFCAP00000000851.2 Felis catus 42 6e-16 83.2
WERAM-Ora-0083 ENSOANP00000013848.2 Ornithorhynchus anatinus 42 7e-16 83.2
WERAM-Tut-0179 ENSTTRP00000015157.1 Tursiops truncatus 42 7e-16 83.2
WERAM-Mae-0088 ENSMEUP00000008845.1 Macropus eugenii 42 7e-16 83.2
WERAM-Sah-0090 ENSSHAP00000010568.1 Sarcophilus harrisii 42 7e-16 83.2
WERAM-Myl-0052 ENSMLUP00000004424.2 Myotis lucifugus 42 8e-16 82.8
WERAM-Pytr-0019 EDU48226 Pyrenophora triticirepentis 36 9e-16 82.8
WERAM-Anc-0179 ENSACAP00000017011.3 Anolis carolinensis 41 1e-15 82.8
WERAM-Meg-0092 ENSMGAP00000008728.2 Meleagris gallopavo 42 1e-15 82.4
WERAM-Ect-0055 ENSETEP00000005894.1 Echinops telfairi 41 1e-15 82.4
WERAM-Pyt-0004 EFQ95588 Pyrenophora teres 36 1e-15 82.0
WERAM-Gaa-0105 ENSGACP00000013356.1 Gasterosteus aculeatus 40 2e-15 81.6
WERAM-Lac-0047 ENSLACP00000006835.1 Latimeria chalumnae 43 2e-15 81.6
WERAM-Lem-0016 CBX93493 Leptosphaeria maculans 34 2e-15 81.3
WERAM-Scj-0017 EEB07604 Schizosaccharomyces japonicus 34 3e-15 81.3
WERAM-Phn-0031 SNOT_15588 Phaeosphaeria nodorum 38 4e-15 80.5
WERAM-Asm-0188 ENSAMXP00000018107.1 Astyanax mexicanus 39 4e-15 80.5
WERAM-Leo-0065 ENSLOCP00000008328.1 Lepisosteus oculatus 40 5e-15 80.1
WERAM-Tum-0025 CAZ84417 Tuber melanosporum 38 9e-15 79.3
WERAM-Dar-0182 ENSDARP00000101616.2 Danio rerio 40 9e-15 79.3
WERAM-Xet-0088 ENSXETP00000028569.3 Xenopus tropicalis 41 2e-14 77.8
WERAM-Hov-0096 MLOC_70538.1 Hordeum vulgare 40 4e-14 77.0
WERAM-Cym-0015 CMK212CT Cyanidioschyzon merolae 38 5e-14 77.0
WERAM-Asni-0013 CADANGAP00004232 Aspergillus niger 35 6e-14 76.6
WERAM-Gam-0097 ENSGMOP00000009935.1 Gadus morhua 38 6e-14 76.6
WERAM-Sac-0006 YDL070W Saccharomyces cerevisiae 34 8e-14 76.3
WERAM-Fia-0029 ENSFALP00000001836.1 Ficedula albicollis 38 1e-13 75.9
WERAM-Prc-0094 ENSPCAP00000008495.1 Procavia capensis 40 1e-13 75.9
WERAM-Ict-0092 ENSSTOP00000009696.2 Ictidomys tridecemlineatus 40 1e-13 75.5
WERAM-Pes-0007 ENSPSIP00000002650.1 Pelodiscus sinensis 39 1e-13 75.5
WERAM-Dan-0048 ENSDNOP00000004798.3 Dasypus novemcinctus 40 1e-13 75.5
WERAM-Drm-0091 FBpp0291862 Drosophila melanogaster 37 2e-13 74.7
WERAM-Pem-0020 ENSPMAP00000002717.1 Petromyzon marinus 42 2e-13 74.7
WERAM-Osl-0042 ABO96608 Ostreococcus lucimarinus 42 3e-13 74.3
WERAM-Orm-0027 OMERI02G22640.1 Oryza meridionalis 37 3e-13 74.3
WERAM-Vip-0081 ENSVPAP00000007489.1 Vicugna pacos 40 4e-13 73.9
Created Date 25-Jun-2016