Oryza sativa      Me_Reader      PHD

※ PHD family introduction

    PHD: Distinct from the Royal family is the PHD finger, a well-characterized reader of H3K4me3. It contains a C4HC3 motif that coordinates two zinc ions in a cross-brace manner. Such an arrangement produces a globular domain with a small β-sheet and an α-helix. PHD fingers make extensive contacts with H3K4me3, imparting a high degree of specificity. (1)

Reference
1. Musselman CA, Lalonde ME, Cote J, Kutateladze TG.Perceiving the epigenetic landscape through histone readers. Nat Struct Mol Biol.2012;19(12):1218-27. PMID: 23211769.



There are 36 genes.  Reviewed (0 or Unreviewed (36

No.StatusWERAM IDGene/Alias Name
1
WERAM-Ors-0007
Os01g0883400 OSNPB_010883400
2
WERAM-Ors-0008
Os01g0887700 LOC_Os01g66420 B1099D03.10 OsJ_04343 P0434C04.30
3
WERAM-Ors-0011
Os01g0965500 OSNPB_010965500
4
WERAM-Ors-0014
Os02g0122700 OSNPB_020122700
5
WERAM-Ors-0016
P0437H03.106 Os02g0192300 OSNPB_020192300 P0453H10.27
6
WERAM-Ors-0017
Os02g0192400 OSNPB_020192400
7
WERAM-Ors-0022
Os02g0564100 LOC_Os02g35600 OJ1712_E04.22 OsJ_07167 P0020C11.11
8
WERAM-Ors-0028
Os03g0143600 LOC_Os03g04980 Os03g0143600 OsJ_09369 OSNPB_030143600
9
WERAM-Ors-0029
LOC_Os03g19020 Os03g0302200 OsJ_10531 OSNPB_030302200
10
WERAM-Ors-0034
Os03g0716200 LOC_Os03g50780 OSJNBa0014G15.5 OSNPB_030716200
11
WERAM-Ors-0035
Os03g0748200 LOC_Os03g53700 Os03g0748200 OSNPB_030748200
12
WERAM-Ors-0036
OSJNBa0052F07.18 LOC_Os03g58530 Os03g0799600 OsJ_12973 OSNPB_030799600
13
WERAM-Ors-0037
Os03g0818300 LOC_Os03g60390 OJ1754_E06.2 OsJ_13123 OSJNBa0094J08.5
14
WERAM-Ors-0040
Os04g0425100 OSNPB_040425100
15
WERAM-Ors-0042
Os04g0444900 LOC_Os04g36730 OsJ_14937 OSJNBa0027P08.7
16
WERAM-Ors-0046
Os04g0691700 OSNPB_040691700
17
WERAM-Ors-0047
Os05g0163100 OSNPB_050163100
18
WERAM-Ors-0048
Os05g0419100 LOC_Os05g34640 OsJ_18575 P0426G01.9
19
WERAM-Ors-0053
B1460A05.22 Os06g0101000 OSNPB_060101000
20
WERAM-Ors-0054
HAZ1 Os06g0229300 OSNPB_060229300 P0525F01.18
21
WERAM-Ors-0056
Os06g0283200 Os06g0283200 OSJNBa0021H05.26 OSNPB_060283200
22
WERAM-Ors-0062
Os06g0731100 OSNPB_060731100
23
WERAM-Ors-0063
Os06g0731600 OSNPB_060731600
24
WERAM-Ors-0065
Os07g0186400
25
WERAM-Ors-0066
Os07g0233300 LOC_Os07g12910 OsJ_23628 OSJNBa0061L20.107-1
26
WERAM-Ors-0068
Os07g0497100 Os07g0497100 OSNPB_070497100
27
WERAM-Ors-0073
Os07g0608400 LOC_Os07g41740 OsJ_25070 OSJNBa0072I06.37 OSJNBb0018L13.1
28
WERAM-Ors-0075
Os07g0661550 OSNPB_070661550
29
WERAM-Ors-0076
OsJ_25746
30
WERAM-Ors-0083
Os08g0421900 Os08g0421900 OsJ_27353 OSJNBa0077M12.117 OSNPB_080421900
31
WERAM-Ors-0091
Os09g0386500 Os09g0386500 OsJ_29217 OSJNBa0048A13.16 OSNPB_090386500
32
WERAM-Ors-0099
Os11g0148800 OSNPB_110148800
33
WERAM-Ors-0102
Os11g0234200 LOC_Os11g12650 Os11g0234200 OSNPB_110234200
34
WERAM-Ors-0103
Os11g0244800 LOC_Os11g14010 OsJ_33509 OSJNBa0004P24 OSJNBa0024M06
35
WERAM-Ors-0104
Os11g0292050 OSNPB_110292050
36
WERAM-Ors-0110
Os12g0527800 LOC_Os12g34330 Os12g0527800 OSNPB_120527800