Vitis vinifera      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 21 genes.  Reviewed (0 or Unreviewed (21

No.StatusWERAM IDGene/Alias Name
1
WERAM-Viv-0011
VIT_03s0038g03830
2
WERAM-Viv-0014
VIT_03s0097g00570
3
WERAM-Viv-0028
VIT_05s0077g01160
4
WERAM-Viv-0029
VIT_05s0102g00260
5
WERAM-Viv-0035
VIT_06s0004g08340
6
WERAM-Viv-0049
VIT_07s0141g00140
7
WERAM-Viv-0050
VIT_07s0141g00150
8
WERAM-Viv-0058
VIT_08s0056g00330
9
WERAM-Viv-0064
VIT_10s0003g02240
10
WERAM-Viv-0072
VIT_12s0028g02510
11
WERAM-Viv-0073
VIT_12s0028g03940
12
WERAM-Viv-0074
VIT_12s0035g00930
13
WERAM-Viv-0075
VIT_12s0035g00950
14
WERAM-Viv-0080
VIT_13s0019g03950
15
WERAM-Viv-0085
VIT_13s0156g00340 VITISV_024454
16
WERAM-Viv-0092
VIT_14s0171g00380
17
WERAM-Viv-0096
VIT_15s0046g02290
18
WERAM-Viv-0104
VIT_17s0000g01830
19
WERAM-Viv-0118
VIT_18s0122g01220
20
WERAM-Viv-0121
VIT_19s0014g01650
21
WERAM-Viv-0123
VIT_19s0090g00610