Takifugu rubripes      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 43 genes.  Reviewed (0 or Unreviewed (43

No.StatusWERAM IDGene/Alias Name
1
WERAM-Tar-0005
phip
2
WERAM-Tar-0010
brwd1
3
WERAM-Tar-0011
brd1a
4
WERAM-Tar-0015
SMARCA4
5
WERAM-Tar-0030
baz2a
6
WERAM-Tar-0033
brdt
7
WERAM-Tar-0044
zmynd11
8
WERAM-Tar-0047
brd2a
9
WERAM-Tar-0052
smarca4a
10
WERAM-Tar-0054
crebbpb
11
WERAM-Tar-0059
trim24
12
WERAM-Tar-0060
pbrm1l
13
WERAM-Tar-0067
brd8
14
WERAM-Tar-0069
atad2b
15
WERAM-Tar-0070
brd3a
16
WERAM-Tar-0072
baz1b
17
WERAM-Tar-0073
prkcbp1l
18
WERAM-Tar-0075
pbrm1
19
WERAM-Tar-0083
ep300b
20
WERAM-Tar-0092
im:6907928
21
WERAM-Tar-0093
trim33
22
WERAM-Tar-0099
brd7
23
WERAM-Tar-0101
brpf3b
24
WERAM-Tar-0110
zmynd8
25
WERAM-Tar-0116
BRPF1
26
WERAM-Tar-0134
ash1l
27
WERAM-Tar-0151
crebbpa
28
WERAM-Tar-0160
brwd3
29
WERAM-Tar-0168
30
WERAM-Tar-0170
brpf3a
31
WERAM-Tar-0173
brd9
32
WERAM-Tar-0179
brd4
33
WERAM-Tar-0191
taf1
34
WERAM-Tar-0192
smarca2
35
WERAM-Tar-0193
kat2a
36
WERAM-Tar-0198
BRD4
37
WERAM-Tar-0199
brd1b
38
WERAM-Tar-0210
ep300a
39
WERAM-Tar-0212
baz2ba
40
WERAM-Tar-0214
trim66
41
WERAM-Tar-0216
atad2
42
WERAM-Tar-0220
kat2b
43
WERAM-Tar-0223
si:dkey-226m8.10