Sus scrofa      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusWERAM IDGene/Alias Name
1
WERAM-Sus-0003
EP300
2
WERAM-Sus-0007
BAZ2A
3
WERAM-Sus-0011
CECR2
4
WERAM-Sus-0016
BRD2
5
WERAM-Sus-0019
BAZ1A
6
WERAM-Sus-0029
7
WERAM-Sus-0034
KIAA2026
8
WERAM-Sus-0035
SMARCA2
9
WERAM-Sus-0039
BRD3
10
WERAM-Sus-0041
ATAD2
11
WERAM-Sus-0043
ASH1L
12
WERAM-Sus-0050
ZMYND8
13
WERAM-Sus-0057
CREBBP
14
WERAM-Sus-0060
15
WERAM-Sus-0078
ZMYND11
16
WERAM-Sus-0081
BRPF1
17
WERAM-Sus-0101
SMARCA4
18
WERAM-Sus-0107
BRD8
19
WERAM-Sus-0111
TRIM66
20
WERAM-Sus-0119
21
WERAM-Sus-0120
SP140
22
WERAM-Sus-0121
SP100
23
WERAM-Sus-0123
TRIM24
24
WERAM-Sus-0132
KAT2A
25
WERAM-Sus-0147
26
WERAM-Sus-0148
BRD7
27
WERAM-Sus-0153
BRD4
28
WERAM-Sus-0154
LOC100512752
29
WERAM-Sus-0168
KAT2B
30
WERAM-Sus-0170
31
WERAM-Sus-0187
LOC100620926
32
WERAM-Sus-0188
BAZ1B