Setaria italica      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 23 genes.  Reviewed (0 or Unreviewed (23

No.StatusWERAM IDGene/Alias Name
1
WERAM-Sei-0009
SETIT_001167mg
2
WERAM-Sei-0013
SETIT_002711mg
3
WERAM-Sei-0027
SETIT_006741mg
4
WERAM-Sei-0034
SETIT_010051mg SETIT_020659mg
5
WERAM-Sei-0043
SETIT_013340mg
6
WERAM-Sei-0046
SETIT_013408mg
7
WERAM-Sei-0047
SETIT_013421mg
8
WERAM-Sei-0048
SETIT_013430mg
9
WERAM-Sei-0049
SETIT_013657mg
10
WERAM-Sei-0065
SETIT_016501mg
11
WERAM-Sei-0066
SETIT_016549mg
12
WERAM-Sei-0067
13
WERAM-Sei-0075
SETIT_016554mg
14
WERAM-Sei-0076
SETIT_020960mg
15
WERAM-Sei-0094
SETIT_026157mg
16
WERAM-Sei-0099
SETIT_028722mg
17
WERAM-Sei-0102
SETIT_028732mg
18
WERAM-Sei-0112
SETIT_029233mg
19
WERAM-Sei-0113
SETIT_029325mg
20
WERAM-Sei-0123
SETIT_032535mg
21
WERAM-Sei-0130
SETIT_034652mg
22
WERAM-Sei-0131
SETIT_035227mg
23
WERAM-Sei-0138
SETIT_039426mg