Poecilia formosa      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 56 genes.  Reviewed (0 or Unreviewed (56

No.StatusWERAM IDGene/Alias Name
1
WERAM-Pof-0002
brd9
2
WERAM-Pof-0003
brd8
3
WERAM-Pof-0006
phip
4
WERAM-Pof-0020
pbrm1
5
WERAM-Pof-0023
atad2b
6
WERAM-Pof-0026
smarca2
7
WERAM-Pof-0035
taf1
8
WERAM-Pof-0041
brd2a
9
WERAM-Pof-0051
atad2
10
WERAM-Pof-0053
atad2
11
WERAM-Pof-0056
crebbpa
12
WERAM-Pof-0061
13
WERAM-Pof-0069
si:dkey-68o6.2
14
WERAM-Pof-0071
zmynd8
15
WERAM-Pof-0078
brd4
16
WERAM-Pof-0083
brd2b
17
WERAM-Pof-0091
smarca4a
18
WERAM-Pof-0092
trim66
19
WERAM-Pof-0100
ash1l
20
WERAM-Pof-0102
BRD4
21
WERAM-Pof-0109
zmynd11
22
WERAM-Pof-0113
brd1a
23
WERAM-Pof-0117
24
WERAM-Pof-0125
kat2b
25
WERAM-Pof-0128
trim24
26
WERAM-Pof-0130
BRD3
27
WERAM-Pof-0131
prkcbp1l
28
WERAM-Pof-0132
baz1b
29
WERAM-Pof-0134
BRD3
30
WERAM-Pof-0137
cecr2
31
WERAM-Pof-0140
crebbpb
32
WERAM-Pof-0142
baz2a
33
WERAM-Pof-0146
kat2a
34
WERAM-Pof-0149
kat2a
35
WERAM-Pof-0158
SMARCA4
36
WERAM-Pof-0168
bptf
37
WERAM-Pof-0170
ep300b
38
WERAM-Pof-0173
BRPF1
39
WERAM-Pof-0179
brpf3a
40
WERAM-Pof-0185
brd7
41
WERAM-Pof-0190
BAZ2B
42
WERAM-Pof-0192
trim33
43
WERAM-Pof-0194
brpf3b
44
WERAM-Pof-0197
brwd1
45
WERAM-Pof-0204
brdt
46
WERAM-Pof-0211
brd1b
47
WERAM-Pof-0212
ep300a
48
WERAM-Pof-0215
pbrm1l
49
WERAM-Pof-0227
im:6907928
50
WERAM-Pof-0231
atad2
51
WERAM-Pof-0232
si:ch211-59d17.3
52
WERAM-Pof-0235
brwd3
53
WERAM-Pof-0240
KIAA2026
54
WERAM-Pof-0245
phip
55
WERAM-Pof-0250
TRIM66
56
WERAM-Pof-0261
BAZ2B