Physcomitrella patens      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 19 genes.  Reviewed (0 or Unreviewed (19

No.StatusWERAM IDGene/Alias Name
1
WERAM-Php-0011
PHYPADRAFT_166617
2
WERAM-Php-0015
PHYPADRAFT_66961
3
WERAM-Php-0021
BRD1503 PHYPADRAFT_167346
4
WERAM-Php-0024
BRD1504 PHYPADRAFT_167500
5
WERAM-Php-0041
SDG1519 PHYPADRAFT_168813
6
WERAM-Php-0045
PHYPADRAFT_169211
7
WERAM-Php-0049
BRD1502 PHYPADRAFT_169613
8
WERAM-Php-0059
CHR1520 PHYPADRAFT_160727
9
WERAM-Php-0060
HAF1502 PHYPADRAFT_94126
10
WERAM-Php-0061
BRD1501 PHYPADRAFT_170771
11
WERAM-Php-0067
SDG1547 PHYPADRAFT_70599
12
WERAM-Php-0074
EBP1503 PHYPADRAFT_47783
13
WERAM-Php-0089
GTE1505 PHYPADRAFT_61320
14
WERAM-Php-0100
PHYPADRAFT_34931
15
WERAM-Php-0120
PHYPADRAFT_81253
16
WERAM-Php-0124
BRAT1501 PHYPADRAFT_185326
17
WERAM-Php-0126
HAG1501 PHYPADRAFT_130814
18
WERAM-Php-0134
PHYPADRAFT_169212
19
WERAM-Php-0136
HAF1501 PHYPADRAFT_165727