Oryzias latipes      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 47 genes.  Reviewed (0 or Unreviewed (47

No.StatusWERAM IDGene/Alias Name
1
WERAM-Orla-0005
trim33
2
WERAM-Orla-0006
brpf3b
3
WERAM-Orla-0007
pbrm1
4
WERAM-Orla-0009
ash1l
5
WERAM-Orla-0014
pbrm1l
6
WERAM-Orla-0023
ep300a
7
WERAM-Orla-0027
si:dkey-226m8.10
8
WERAM-Orla-0037
kat2a
9
WERAM-Orla-0039
brpf3a
10
WERAM-Orla-0040
SMARCA4
11
WERAM-Orla-0043
baz2ba
12
WERAM-Orla-0055
zmynd11
13
WERAM-Orla-0059
atad2
14
WERAM-Orla-0060
si:ch211-59d17.3
15
WERAM-Orla-0063
brd4
16
WERAM-Orla-0064
brd2a
17
WERAM-Orla-0067
trim66
18
WERAM-Orla-0080
brd9
19
WERAM-Orla-0082
crebbpb
20
WERAM-Orla-0084
taf1
21
WERAM-Orla-0096
brwd3
22
WERAM-Orla-0099
brd8
23
WERAM-Orla-0102
atad2b
24
WERAM-Orla-0106
BRD4
25
WERAM-Orla-0107
phip
26
WERAM-Orla-0108
im:6907928
27
WERAM-Orla-0117
BRPF1
28
WERAM-Orla-0118
trim24
29
WERAM-Orla-0120
baz1b
30
WERAM-Orla-0122
brd1a
31
WERAM-Orla-0123
prkcbp1l
32
WERAM-Orla-0126
brd3a
33
WERAM-Orla-0127
baz2a
34
WERAM-Orla-0128
kat2b
35
WERAM-Orla-0137
brwd1
36
WERAM-Orla-0142
zmynd8
37
WERAM-Orla-0145
38
WERAM-Orla-0148
brdt
39
WERAM-Orla-0149
brd7
40
WERAM-Orla-0150
ep300b
41
WERAM-Orla-0163
bptf
42
WERAM-Orla-0167
smarca4a
43
WERAM-Orla-0171
brd2b
44
WERAM-Orla-0179
45
WERAM-Orla-0201
pbrm1l
46
WERAM-Orla-0206
pbrm1l
47
WERAM-Orla-0213
smarca2