Oryza sativa      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 17 genes.  Reviewed (0 or Unreviewed (17

No.StatusWERAM IDGene/Alias Name
1
WERAM-Ors-0003
Os01g0648700 OJ1316_H05.21 OSNPB_010648700
2
WERAM-Ors-0013
Os02g0114000 OSNPB_020114000
3
WERAM-Ors-0020
Os02g0250300 OsJ_06088 OSNPB_020250300
4
WERAM-Ors-0023
OJ1791_B03.42-1 Os02g0601800 OJ1669_F01.4-1 OsJ_07416 OSNPB_020601800
5
WERAM-Ors-0027
Os03g0130800 Os03g0130800 OSNPB_030130800
6
WERAM-Ors-0044
Os04g0622800 OSNPB_040622800
7
WERAM-Ors-0045
Os04g0623100 Os04g0623100 OSJNBa0053K19.4 OSJNBb0085C12.15 OSNPB_040623100
8
WERAM-Ors-0057
Os06g0355500 Os06g0355500 OSNPB_060355500
9
WERAM-Ors-0060
OsJ_22148
10
WERAM-Ors-0069
Os07g0507700 OSNPB_070507700
11
WERAM-Ors-0071
OJ1773_H01.106 OJ1112_E08.125 Os07g0565300 OsJ_24767 OSNPB_070565300
12
WERAM-Ors-0077
Os08g0109500 Os08g0109500 OSNPB_080109500 P0007D08.15
13
WERAM-Ors-0080
Os08g0192800 OsJ_26323 OSJNBa0056O06.23 OSNPB_080192800
14
WERAM-Ors-0085
OSJNBa0016N23.124-1 Os08g0510700 OSNPB_080510700
15
WERAM-Ors-0094
Os09g0515100 Os09g0515100 OSNPB_090515100 P0450E05.23
16
WERAM-Ors-0095
Os09g0550000 OJ1210_A07.24 OSNPB_090550000 P0489D11.5
17
WERAM-Ors-0097
GCN5 Os10g0415900 LOC_Os10g28040