Oreochromis niloticus      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 53 genes.  Reviewed (0 or Unreviewed (53

No.StatusWERAM IDGene/Alias Name
1
WERAM-Orn-0007
brd3
2
WERAM-Orn-0013
atad2b
3
WERAM-Orn-0014
phip
4
WERAM-Orn-0016
kat2a
5
WERAM-Orn-0021
brd4
6
WERAM-Orn-0024
kat2b
7
WERAM-Orn-0026
brd7
8
WERAM-Orn-0030
brd9
9
WERAM-Orn-0037
baz2ba
10
WERAM-Orn-0042
BRD4
11
WERAM-Orn-0044
brpf3a
12
WERAM-Orn-0045
brd1b
13
WERAM-Orn-0046
pbrm1l
14
WERAM-Orn-0047
taf1
15
WERAM-Orn-0048
brwd3
16
WERAM-Orn-0054
si:ch211-59d17.3
17
WERAM-Orn-0056
crebbpb
18
WERAM-Orn-0060
brwd1
19
WERAM-Orn-0064
baz1b
20
WERAM-Orn-0068
trim66
21
WERAM-Orn-0075
bptf
22
WERAM-Orn-0083
atad2
23
WERAM-Orn-0091
smarca4a
24
WERAM-Orn-0092
bptf
25
WERAM-Orn-0096
ep300b
26
WERAM-Orn-0097
si:dkey-68o6.2
27
WERAM-Orn-0100
brd2b
28
WERAM-Orn-0104
29
WERAM-Orn-0105
BAZ2B
30
WERAM-Orn-0109
trim33
31
WERAM-Orn-0110
brpf3b
32
WERAM-Orn-0121
brd1a
33
WERAM-Orn-0129
cecr2
34
WERAM-Orn-0134
si:dkey-226m8.10
35
WERAM-Orn-0137
im:6907928
36
WERAM-Orn-0159
brd3b
37
WERAM-Orn-0172
atad2
38
WERAM-Orn-0173
KIAA2026
39
WERAM-Orn-0175
smarca2
40
WERAM-Orn-0191
brd8
41
WERAM-Orn-0198
crebbpa
42
WERAM-Orn-0202
trim24
43
WERAM-Orn-0205
baz2a
44
WERAM-Orn-0207
prkcbp1l
45
WERAM-Orn-0211
BRPF1
46
WERAM-Orn-0215
zmynd11
47
WERAM-Orn-0217
SMARCA4
48
WERAM-Orn-0222
pbrm1
49
WERAM-Orn-0225
brdt
50
WERAM-Orn-0229
ep300a
51
WERAM-Orn-0231
ash1l
52
WERAM-Orn-0236
brd2a
53
WERAM-Orn-0240
zmynd8