Ictidomys tridecemlineatus      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 35 genes.  Reviewed (0 or Unreviewed (35

No.StatusWERAM IDGene/Alias Name
1
WERAM-Ict-0006
2
WERAM-Ict-0012
EP300
3
WERAM-Ict-0016
TRIM66
4
WERAM-Ict-0026
BRPF1
5
WERAM-Ict-0032
KAT2B
6
WERAM-Ict-0033
TRIM24
7
WERAM-Ict-0035
BRDT
8
WERAM-Ict-0049
BRWD3
9
WERAM-Ict-0054
SP140
10
WERAM-Ict-0058
CECR2
11
WERAM-Ict-0066
KAT2A
12
WERAM-Ict-0068
BRPF3
13
WERAM-Ict-0070
ZMYND8
14
WERAM-Ict-0071
SMARCA2
15
WERAM-Ict-0073
BRD8
16
WERAM-Ict-0078
SMARCA4
17
WERAM-Ict-0080
BRD1
18
WERAM-Ict-0086
ZMYND11
19
WERAM-Ict-0092
BRD2
20
WERAM-Ict-0093
BAZ1B
21
WERAM-Ict-0105
BAZ1A
22
WERAM-Ict-0119
BPTF
23
WERAM-Ict-0121
BAZ2A
24
WERAM-Ict-0127
KMT2A
25
WERAM-Ict-0130
ATAD2
26
WERAM-Ict-0137
27
WERAM-Ict-0138
BRD3
28
WERAM-Ict-0146
PHIP
29
WERAM-Ict-0153
ATAD2B
30
WERAM-Ict-0156
31
WERAM-Ict-0159
TRIM28
32
WERAM-Ict-0178
BRD7
33
WERAM-Ict-0184
34
WERAM-Ict-0188
BRD9
35
WERAM-Ict-0191