Gasterosteus aculeatus      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 48 genes.  Reviewed (0 or Unreviewed (48

No.StatusWERAM IDGene/Alias Name
1
WERAM-Gaa-0002
BRPF1
2
WERAM-Gaa-0003
brd2a
3
WERAM-Gaa-0008
pbrm1
4
WERAM-Gaa-0014
brpf3a
5
WERAM-Gaa-0016
pbrm1l
6
WERAM-Gaa-0018
atad2
7
WERAM-Gaa-0026
ash1l
8
WERAM-Gaa-0034
im:6907928
9
WERAM-Gaa-0037
brdt
10
WERAM-Gaa-0045
ep300a
11
WERAM-Gaa-0049
brpf3b
12
WERAM-Gaa-0050
trim33
13
WERAM-Gaa-0051
kat2b
14
WERAM-Gaa-0060
atad2
15
WERAM-Gaa-0061
BAZ2B
16
WERAM-Gaa-0068
smarca4a
17
WERAM-Gaa-0069
bptf
18
WERAM-Gaa-0073
baz1b
19
WERAM-Gaa-0075
ep300b
20
WERAM-Gaa-0082
SP110
21
WERAM-Gaa-0083
si:dkey-68o6.2
22
WERAM-Gaa-0085
brd9
23
WERAM-Gaa-0086
kat2a
24
WERAM-Gaa-0090
brd1b
25
WERAM-Gaa-0102
zmynd8
26
WERAM-Gaa-0105
brd4
27
WERAM-Gaa-0114
crebbpb
28
WERAM-Gaa-0128
phip
29
WERAM-Gaa-0129
atad2b
30
WERAM-Gaa-0134
brd2b
31
WERAM-Gaa-0147
smarca2
32
WERAM-Gaa-0156
BAZ2B
33
WERAM-Gaa-0158
prkcbp1l
34
WERAM-Gaa-0160
baz2a
35
WERAM-Gaa-0168
trim66
36
WERAM-Gaa-0171
si:dkey-226m8.10
37
WERAM-Gaa-0174
SMARCA4
38
WERAM-Gaa-0178
brd7
39
WERAM-Gaa-0185
zmynd11
40
WERAM-Gaa-0192
brd3b
41
WERAM-Gaa-0197
bptf
42
WERAM-Gaa-0199
brd8
43
WERAM-Gaa-0202
crebbpa
44
WERAM-Gaa-0204
trim24
45
WERAM-Gaa-0206
brd1a
46
WERAM-Gaa-0217
brwd3
47
WERAM-Gaa-0218
taf1
48
WERAM-Gaa-0221
si:ch211-59d17.3