Gallus gallus      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 32 genes.  Reviewed (0 or Unreviewed (32

No.StatusWERAM IDGene/Alias Name
1
WERAM-Gaga-0001
BRD2
2
WERAM-Gaga-0007
BRPF3
3
WERAM-Gaga-0016
PBRM1
4
WERAM-Gaga-0021
TRIM33
5
WERAM-Gaga-0026
BRD3
6
WERAM-Gaga-0033
BRD8
7
WERAM-Gaga-0037
KAT2A
8
WERAM-Gaga-0038
BPTF
9
WERAM-Gaga-0040
BRD7
10
WERAM-Gaga-0052
ZMYND8
11
WERAM-Gaga-0058
Gga.55346
12
WERAM-Gaga-0062
TRIM66
13
WERAM-Gaga-0063
BRDT
14
WERAM-Gaga-0071
ZMYND11
15
WERAM-Gaga-0073
BRPF1
16
WERAM-Gaga-0077
BRWD3
17
WERAM-Gaga-0081
CREBBP
18
WERAM-Gaga-0088
BRD1
19
WERAM-Gaga-0101
BAZ1A
20
WERAM-Gaga-0103
SMARCA2
21
WERAM-Gaga-0110
KAT2B
22
WERAM-Gaga-0113
EP300
23
WERAM-Gaga-0115
BRD9
24
WERAM-Gaga-0116
BAZ2B
25
WERAM-Gaga-0120
TRIM24
26
WERAM-Gaga-0124
CECR2
27
WERAM-Gaga-0127
BRD4
28
WERAM-Gaga-0134
ASH1L
29
WERAM-Gaga-0144
PHIP
30
WERAM-Gaga-0146
BRWD1
31
WERAM-Gaga-0149
ATAD2
32
WERAM-Gaga-0151
ATAD2B