Gadus morhua      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 48 genes.  Reviewed (0 or Unreviewed (48

No.StatusWERAM IDGene/Alias Name
1
WERAM-Gam-0005
BAZ2B
2
WERAM-Gam-0011
baz2a
3
WERAM-Gam-0014
trim66
4
WERAM-Gam-0022
ep300b
5
WERAM-Gam-0023
brd2a
6
WERAM-Gam-0024
smarca4a
7
WERAM-Gam-0027
kat2b
8
WERAM-Gam-0037
brpf3a
9
WERAM-Gam-0046
brd1b
10
WERAM-Gam-0050
brwd3
11
WERAM-Gam-0054
cecr2
12
WERAM-Gam-0057
13
WERAM-Gam-0060
ash1l
14
WERAM-Gam-0061
SMARCA4
15
WERAM-Gam-0069
brd7
16
WERAM-Gam-0071
brd1a
17
WERAM-Gam-0073
brd2b
18
WERAM-Gam-0080
pbrm1
19
WERAM-Gam-0084
si:dkey-226m8.10
20
WERAM-Gam-0097
brd4
21
WERAM-Gam-0099
atad2
22
WERAM-Gam-0106
phip
23
WERAM-Gam-0107
atad2b
24
WERAM-Gam-0109
bptf
25
WERAM-Gam-0110
trim24
26
WERAM-Gam-0114
brdt
27
WERAM-Gam-0138
zmynd11
28
WERAM-Gam-0143
ep300a
29
WERAM-Gam-0152
prkcbp1l
30
WERAM-Gam-0154
smarca2
31
WERAM-Gam-0156
brd3b
32
WERAM-Gam-0159
im:6907928
33
WERAM-Gam-0162
crebbpa
34
WERAM-Gam-0163
kat2a
35
WERAM-Gam-0166
36
WERAM-Gam-0171
brpf3b
37
WERAM-Gam-0174
trim33
38
WERAM-Gam-0177
taf1
39
WERAM-Gam-0180
40
WERAM-Gam-0183
baz1b
41
WERAM-Gam-0186
brd9
42
WERAM-Gam-0187
pbrm1l
43
WERAM-Gam-0196
zmynd8
44
WERAM-Gam-0197
BRPF1
45
WERAM-Gam-0199
bptf
46
WERAM-Gam-0208
47
WERAM-Gam-0213
si:ch211-59d17.3
48
WERAM-Gam-0215
brd8