Ficedula albicollis      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 34 genes.  Reviewed (0 or Unreviewed (34

No.StatusWERAM IDGene/Alias Name
1
WERAM-Fia-0002
BRD7
2
WERAM-Fia-0006
KAT2A
3
WERAM-Fia-0010
4
WERAM-Fia-0022
BRD3
5
WERAM-Fia-0026
ATAD2B
6
WERAM-Fia-0029
BRDT
7
WERAM-Fia-0038
BPTF
8
WERAM-Fia-0039
ATAD2
9
WERAM-Fia-0042
PHIP
10
WERAM-Fia-0043
ASH1L
11
WERAM-Fia-0045
CECR2
12
WERAM-Fia-0048
BAZ2B
13
WERAM-Fia-0050
TRIM33
14
WERAM-Fia-0052
BRPF3
15
WERAM-Fia-0053
TRIM24
16
WERAM-Fia-0058
BRWD3
17
WERAM-Fia-0060
SMARCA4
18
WERAM-Fia-0062
CREBBP
19
WERAM-Fia-0069
BRWD1
20
WERAM-Fia-0070
ZMYND8
21
WERAM-Fia-0080
BAZ1A
22
WERAM-Fia-0089
ZMYND11
23
WERAM-Fia-0105
24
WERAM-Fia-0109
BRD8
25
WERAM-Fia-0110
PBRM1
26
WERAM-Fia-0113
KAT2B
27
WERAM-Fia-0116
BRD1
28
WERAM-Fia-0131
SMARCA2
29
WERAM-Fia-0145
30
WERAM-Fia-0148
EP300
31
WERAM-Fia-0157
TRIM28
32
WERAM-Fia-0158
BRPF1
33
WERAM-Fia-0162
BRD9
34
WERAM-Fia-0167
BAZ1B