Danio rerio      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 49 genes.  Reviewed (0 or Unreviewed (49

No.StatusWERAM IDGene/Alias Name
1
WERAM-Dar-0008
pbrm1
2
WERAM-Dar-0016
brd3a
3
WERAM-Dar-0021
zmynd8
4
WERAM-Dar-0022
brd7
5
WERAM-Dar-0024
smarca2
6
WERAM-Dar-0029
prkcbp1l
7
WERAM-Dar-0032
brd1a
8
WERAM-Dar-0037
phip
9
WERAM-Dar-0038
trim33
10
WERAM-Dar-0040
brd9
11
WERAM-Dar-0055
brd2a
12
WERAM-Dar-0057
brd8
13
WERAM-Dar-0075
taf1
14
WERAM-Dar-0076
brwd3
15
WERAM-Dar-0085
zgc:113411
16
WERAM-Dar-0106
brd2b
17
WERAM-Dar-0107
brd1b
18
WERAM-Dar-0109
trim66
19
WERAM-Dar-0111
si:dkey-68o6.2
20
WERAM-Dar-0114
BRD8
21
WERAM-Dar-0121
zmynd11
22
WERAM-Dar-0123
baz2ba
23
WERAM-Dar-0131
atad2b
24
WERAM-Dar-0132
si:dkey-226m8.10
25
WERAM-Dar-0138
ep300b
26
WERAM-Dar-0146
kat2b
27
WERAM-Dar-0150
BAZ1A
28
WERAM-Dar-0161
brpf3a
29
WERAM-Dar-0162
ash1l
30
WERAM-Dar-0165
brpf3b
31
WERAM-Dar-0168
brwd1
32
WERAM-Dar-0175
atad2
33
WERAM-Dar-0176
pbrm1l
34
WERAM-Dar-0177
smarca4a
35
WERAM-Dar-0178
bptf
36
WERAM-Dar-0181
cecr2
37
WERAM-Dar-0182
brd4
38
WERAM-Dar-0186
BAZ2B
39
WERAM-Dar-0193
si:dkey-68o6.4
40
WERAM-Dar-0210
brd3b
41
WERAM-Dar-0211
ep300a
42
WERAM-Dar-0221
brdt
43
WERAM-Dar-0222
baz1b
44
WERAM-Dar-0224
baz2a
45
WERAM-Dar-0225
trim24
46
WERAM-Dar-0230
crebbpb
47
WERAM-Dar-0232
SMARCA4
48
WERAM-Dar-0235
crebbpa
49
WERAM-Dar-0237
kat2a