Cavia porcellus      Ac_Reader      Bromodomain

※ Bromodomain family introduction

    Bromodomain: Bromodomains (BRDs) are protein interaction modules that exclusively recognize acetylation motifs. BRDs are evolutionarily conserved and present in diverse nuclear proteins comprising HATs (GCN5, PCAF), ATP-dependent chromatin-remodeling complexes (BAZ1B), helicases (SMARCA), methyltransferases (MLL, ASH1L), transcriptional coactivators (TRIM/TIF1, TAFs) transcriptional mediators (TAF1), nuclear-scaffolding proteins(PB1), and the BET family. Despite large sequence variations, all BRD modules share a conserved fold that comprises a left-handed bundle of four a helices, linked by loop regions of variablelength, which line the Kac binding site and determine binding specificity. (1)

Reference
1. P. Filippakopoulos, S. Picaud, M. Mangos, T. Keates, J.P. Lambert, D. Barsyte-Lovejoy, I. Felletar, R. Volkmer, S. Müller, T. Pawson,et al.Histone recognition and large-scale structural analysis of the human bromodomain family. Cell.2012;149(1):214-231. PMID: 22464331.



There are 37 genes.  Reviewed (0 or Unreviewed (37

No.StatusWERAM IDGene/Alias Name
1
WERAM-Cap-0001
PBRM1
2
WERAM-Cap-0011
BRD4
3
WERAM-Cap-0014
BRD3
4
WERAM-Cap-0031
BRD2
5
WERAM-Cap-0043
BRDT
6
WERAM-Cap-0044
BRD9
7
WERAM-Cap-0047
BPTF
8
WERAM-Cap-0050
ASH1L
9
WERAM-Cap-0053
10
WERAM-Cap-0055
CREBBP
11
WERAM-Cap-0059
BRD1
12
WERAM-Cap-0060
EP300
13
WERAM-Cap-0063
SMARCA2
14
WERAM-Cap-0067
15
WERAM-Cap-0080
BAZ2A
16
WERAM-Cap-0084
PHIP
17
WERAM-Cap-0090
TRIM66
18
WERAM-Cap-0094
ATAD2
19
WERAM-Cap-0097
BRD8
20
WERAM-Cap-0098
KAT2B
21
WERAM-Cap-0106
BRPF1
22
WERAM-Cap-0113
BRWD3
23
WERAM-Cap-0115
24
WERAM-Cap-0116
BRPF3
25
WERAM-Cap-0119
SP140
26
WERAM-Cap-0122
BRWD1
27
WERAM-Cap-0127
TRIM24
28
WERAM-Cap-0132
BAZ1B
29
WERAM-Cap-0133
BAZ1A
30
WERAM-Cap-0140
ZMYND11
31
WERAM-Cap-0145
ZMYND8
32
WERAM-Cap-0152
33
WERAM-Cap-0166
BAZ2B
34
WERAM-Cap-0167
BRD7
35
WERAM-Cap-0169
SMARCA4
36
WERAM-Cap-0189
37
WERAM-Cap-0196