| Tag |
Content |
| WERAM ID |
WERAM-Viv-0041 |
| Ensembl Protein ID |
VIT_06s0061g01510.t01 |
| Gene Name |
VIT_06s0061g01510 |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
1.60e-161 |
537.7 |
6 |
317 |
|
| Organism |
Vitis vinifera |
| Domain Profile |
HDAC Class-I
class-1.txt 2 kvayaydedvgeyhygqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvg 89
+++y+yd dvg++++g +hpmkp+rl++th+Lvl+y+l+kk+ei++p+ka el++fhs +y+efl++++p++++ + +el+k+n+g
VIT_06s0061g01510.t01 6 RISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFLNELAKYNLG 93
689************************************************************************************* PP
class-1.txt 90 edcPvfdglfeycqlitGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellkkhkrvlyididlhhGDgvee 177
edcPvf++lfe+cq+++G++++aa++Ln++ +diainwaGGlhhakk+easGfcy+nD+vl+ilellk+h rvlyidid+hhGDgvee
VIT_06s0061g01510.t01 94 EDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVEE 181
**************************************************************************************** PP
class-1.txt 178 afyttdrvmtvsfhkygeeffPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlg 265
afy+tdrvmtvsfhkyg+ ffPgtGd++++g+ +gk+ya+nvPlkdgidD+s++++fk++i kv+e+++P ++vlqcGaDslagDrlg
VIT_06s0061g01510.t01 182 AFYFTDRVMTVSFHKYGDMFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVEIYQPGVIVLQCGADSLAGDRLG 269
**************************************************************************************** PP
class-1.txt 266 efnlsikghaecvkfvksfnlpllvlGGGGYtlrnvaRcwtyetavvl 313
+fnlsi+ghaecv++vk+fnlpllv GGGGYt++nvaRcwt+et+v+l
VIT_06s0061g01510.t01 270 CFNLSIDGHAECVRIVKKFNLPLLVTGGGGYTKENVARCWTVETGVLL 317
**********************************************97 PP
|
Protein Sequence
(Fasta) | MRSKDRISYF YDGDVGSVYF GPNHPMKPHR LCMTHHLVLS YELHKKMEIY RPHKAYPVEL 60
AQFHSADYVE FLHRITPDTQ HLFLNELAKY NLGEDCPVFE NLFEFCQIYA GGTIDAARRL 120
NNQLCDIAIN WAGGLHHAKK CEASGFCYIN DLVLGILELL KHHARVLYID IDVHHGDGVE 180
EAFYFTDRVM TVSFHKYGDM FFPGTGDVKE IGEREGKFYA INVPLKDGID DTSFTRLFKT 240
IIAKVVEIYQ PGVIVLQCGA DSLAGDRLGC FNLSIDGHAE CVRIVKKFNL PLLVTGGGGY 300
TKENVARCWT VETGVLLDTE LPNEIPENEY IKYFGPEHSL KIPNGHIENL NSKSYLGTIK 360
QQVLENLRCI QHAPSVQMQE VPPDFYIPDF DEDEQNPDER VDQHTKDKQI QRNDEYYEGD 420
NDNDHNMDDV Protein Fasta Sequence
>VIT_06s0061g01510.t01|Class-I|Vitis vinifera
MRSKDRISYFYDGDVGSVYFGPNHPMKPHRLCMTHHLVLSYELHKKMEIYRPHKAYPVELAQFHSADYVEFLHRITPDTQHLFLNELAKYNLGEDCPVFENLFEFCQIYAGGTIDAARRLNNQLCDIAINWAGGLHHAKKCEASGFCYINDLVLGILELLKHHARVLYIDIDVHHGDGVEEAFYFTDRVMTVSFHKYGDMFFPGTGDVKEIGEREGKFYAINVPLKDGIDDTSFTRLFKTIIAKVVEIYQPGVIVLQCGADSLAGDRLGCFNLSIDGHAECVRIVKKFNLPLLVTGGGGYTKENVARCWTVETGVLLDTELPNEIPENEYIKYFGPEHSLKIPNGHIENLNSKSYLGTIKQQVLENLRCIQHAPSVQMQEVPPDFYIPDFDEDEQNPDERVDQHTKDKQIQRNDEYYEGDNDNDHNMDDV |
Nucleotide Sequence
(Fasta) | CCTGATATTC ATCTTCCTTT CTACTAGGGA GGAAGCAGAG ATGGTCAAAG CTCAGTGACC 60
ATACATCTTC TTCCTCCACC GTTCGTCGCT AAAATGCGCT CTAAGGACAG GATCTCCTAC 120
TTCTACGACG GTGATGTGGG AAGTGTGTAC TTTGGGCCCA ACCATCCAAT GAAGCCGCAT 180
CGGCTTTGTA TGACTCACCA TCTCGTACTC TCTTACGAAC TTCACAAGAA GATGGAAATC 240
TATAGGCCTC ACAAGGCGTA TCCAGTTGAG CTTGCCCAGT TTCATTCTGC AGACTATGTG 300
GAGTTTCTGC ATCGGATAAC CCCTGACACA CAACATTTAT TCTTGAATGA ATTAGCAAAA 360
TATAATCTTG GAGAAGATTG CCCTGTCTTC GAAAATTTAT TTGAGTTTTG TCAAATTTAT 420
GCTGGTGGAA CAATAGATGC TGCACGCAGA TTAAACAATC AGCTTTGTGA CATTGCTATA 480
AATTGGGCTG GTGGATTGCA CCATGCAAAG AAGTGTGAGG CATCTGGATT TTGTTACATC 540
AACGACTTGG TTTTGGGGAT TTTGGAGCTT CTAAAACATC ATGCACGTGT CCTTTATATT 600
GATATAGATG TGCATCATGG TGATGGTGTA GAAGAAGCCT TTTATTTCAC AGACAGGGTG 660
ATGACTGTTA GTTTTCACAA GTACGGGGAT ATGTTCTTTC CTGGAACAGG TGATGTTAAG 720
GAAATAGGAG AAAGAGAGGG AAAATTTTAT GCCATAAATG TCCCACTCAA GGATGGAATA 780
GATGACACTA GCTTTACTCG ACTGTTCAAA ACAATTATTG CCAAGGTTGT TGAAATATAT 840
CAGCCAGGTG TGATAGTTCT TCAATGTGGG GCAGATTCTC TTGCTGGGGA CCGCTTGGGT 900
TGTTTCAACC TCTCCATTGA TGGGCATGCT GAATGTGTCA GAATTGTGAA GAAATTCAAT 960
TTGCCCTTAC TGGTTACTGG AGGTGGGGGA TATACAAAAG AGAATGTTGC TCGATGTTGG 1020
ACTGTTGAAA CAGGGGTGCT TTTAGATACT GAACTTCCCA ATGAGATCCC AGAAAATGAA 1080
TATATCAAAT ATTTTGGGCC GGAGCATTCA TTGAAGATTC CAAATGGGCA CATAGAGAAC 1140
TTAAATAGCA AATCATATCT TGGAACAATT AAGCAGCAAG TCTTGGAAAA TCTCCGTTGC 1200
ATCCAGCATG CACCAAGTGT ACAGATGCAA GAGGTTCCAC CAGACTTCTA TATTCCTGAT 1260
TTTGACGAAG ATGAGCAGAA TCCTGATGAA CGAGTAGATC AGCACACCAA GGACAAGCAA 1320
ATCCAGAGAA ATGATGAATA TTATGAAGGT GATAACGACA ATGATCACAA TATGGATGAT 1380
GTATAAAGTA AGCTAGGCAG TGTTTTTTTT TTTTTTTTTT
1421Nucleotide Fasta Sequence
>VIT_06s0061g01510.t01|Class-I|Vitis vinifera
CCTGATATTCATCTTCCTTTCTACTAGGGAGGAAGCAGAGATGGTCAAAGCTCAGTGACCATACATCTTCTTCCTCCACCGTTCGTCGCTAAAATGCGCTCTAAGGACAGGATCTCCTACTTCTACGACGGTGATGTGGGAAGTGTGTACTTTGGGCCCAACCATCCAATGAAGCCGCATCGGCTTTGTATGACTCACCATCTCGTACTCTCTTACGAACTTCACAAGAAGATGGAAATCTATAGGCCTCACAAGGCGTATCCAGTTGAGCTTGCCCAGTTTCATTCTGCAGACTATGTGGAGTTTCTGCATCGGATAACCCCTGACACACAACATTTATTCTTGAATGAATTAGCAAAATATAATCTTGGAGAAGATTGCCCTGTCTTCGAAAATTTATTTGAGTTTTGTCAAATTTATGCTGGTGGAACAATAGATGCTGCACGCAGATTAAACAATCAGCTTTGTGACATTGCTATAAATTGGGCTGGTGGATTGCACCATGCAAAGAAGTGTGAGGCATCTGGATTTTGTTACATCAACGACTTGGTTTTGGGGATTTTGGAGCTTCTAAAACATCATGCACGTGTCCTTTATATTGATATAGATGTGCATCATGGTGATGGTGTAGAAGAAGCCTTTTATTTCACAGACAGGGTGATGACTGTTAGTTTTCACAAGTACGGGGATATGTTCTTTCCTGGAACAGGTGATGTTAAGGAAATAGGAGAAAGAGAGGGAAAATTTTATGCCATAAATGTCCCACTCAAGGATGGAATAGATGACACTAGCTTTACTCGACTGTTCAAAACAATTATTGCCAAGGTTGTTGAAATATATCAGCCAGGTGTGATAGTTCTTCAATGTGGGGCAGATTCTCTTGCTGGGGACCGCTTGGGTTGTTTCAACCTCTCCATTGATGGGCATGCTGAATGTGTCAGAATTGTGAAGAAATTCAATTTGCCCTTACTGGTTACTGGAGGTGGGGGATATACAAAAGAGAATGTTGCTCGATGTTGGACTGTTGAAACAGGGGTGCTTTTAGATACTGAACTTCCCAATGAGATCCCAGAAAATGAATATATCAAATATTTTGGGCCGGAGCATTCATTGAAGATTCCAAATGGGCACATAGAGAACTTAAATAGCAAATCATATCTTGGAACAATTAAGCAGCAAGTCTTGGAAAATCTCCGTTGCATCCAGCATGCACCAAGTGTACAGATGCAAGAGGTTCCACCAGACTTCTATATTCCTGATTTTGACGAAGATGAGCAGAATCCTGATGAACGAGTAGATCAGCACACCAAGGACAAGCAAATCCAGAGAAATGATGAATATTATGAAGGTGATAACGACAATGATCACAATATGGATGATGTATAAAGTAAGCTAGGCAGTGTTTTTTTTTTTTTTTTTT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
