| Tag |
Content |
| WERAM ID |
WERAM-Tra-0163 |
| Ensembl Protein ID |
Traes_5AL_04BEAE2CB.3 |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HDAC |
Class-I |
2.90e-26 |
95.1 |
120 |
377 |
| HDAC |
Class-I |
1.60e-17 |
66.4 |
223 |
406 |
|
| Organism |
Triticum aestivum |
| Domain Profile |
HDAC Class-I
class-1.txt 33 LvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycq..litGasleaakkLnk 118
L ++ s+ lei + as ++++++hs yi+ l+k ++ +e ++ P + +++ l++Ga ++ ++ +
Traes_5AS_78CA97493.2 120 LTPKHRGSQVLEIQNFYPASLDDVARVHSRTYITGLEKAMSKALDEGL-----IFIEGTGPTYATQTTFAEslLSAGAGITLVDSVVA 202
335566678899999999******************998877776544.....45888889887777776533789999988887765 PP
class-1.txt 119 keadiainwaGGl.......hhakkseasGfcyvnDivlailellkkh..krvlyididlhhGDgveeafyttdrvmtvsfhkygeef 197
+ ++++ G+ hha + Gfc +i +a +++h krv+ id+d+hhG+g +afy ++ +s h+ g
Traes_5AS_78CA97493.2 203 AS-KLGLSPPLGFalirppgHHAVPEGPMGFCVFGNIAVAARYAQHQHglKRVMIIDFDVHHGNGTSDAFYDDPDIFFLSTHQLGS-- 287
43.33333322222222333*****************99998777654349***********************************.. PP
class-1.txt 198 fPgtGdlsdvgaekgkyyavnvPlkdgidDesyekifksviskvieafePeavvlqcGaDslagDrlgefnlsikghaecvkfvksfn 285
+PgtG+++ +g+++g ++n+Pl g D s++ f +vi + ++f+P+++++ G D+ a D+l+ ++++ ++ + +k+
Traes_5AS_78CA97493.2 288 YPGTGKMNLIGQGSGEGTTLNLPLPGGSGDYSMRCAFDEVIAPSAQRFKPDIILVSAGYDAHALDPLAGLQFTTGTFYMLASSIKQLA 375
9********************************************************************9999887766666666654 PP
class-1.txt 286 lp 287
+
Traes_5AS_78CA97493.2 376 RE 377
33 PP
HDAC Class-I
class-1.txt 19 khpmkpkrlslt.heLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedcPvfdglfeycqli 105
hp +p+rl+ + +L+ + k +v p++ ++eel+ +h+ +++e +++ ++ + ++ + ++ g+ + + c+
Traes_5AS_4D17CFC07.2 223 PHPERPNRLRAIaASLAAAGIFPSKCALVPPREITKEELVMVHTSDHVESVEQTKNMLYSYFT--SDTYANGHSACAAKLAAGLCADL 308
588999999865156667777788999999999999999999999999988887766666665..56677777777766666666655 PP
class-1.txt 106 tGasleaakkLnkkeadiainwaGGlhhakkseasGfcyvnDivlailellk.khkrvlyididlhhGDgveeafyttdrvmtvsfhk 192
+ sl + ++ ++ a+ G hha ++a Gfc n+ +a l +k k+vl +d d+hhG+g +e f+ + v+ +s+h+
Traes_5AS_4D17CFC07.2 309 A--SLIVSGRVRNG---FALVRPPG-HHAGVKQAMGFCLHNNAAVAALAAQKaGAKKVLIVDWDVHHGNGTQEIFEGNKSVLYISLHR 390
4..44444444444...34444444.999999*****************9996799******************************** PP
class-1.txt 193 ygee.ffPgtGdlsdv 207
++++ f+PgtG +++
Traes_5AS_4D17CFC07.2 391 HEDGsFYPGTGAADET 406
*985499****98776 PP
|
Protein Sequence
(Fasta) | MHIWPEGYTA FRKFASVKDP HLVTSYKMEV LRNSDIKARP LFRVISEDGL QIDGSTPNAC 60
WKEIYCRIKE KQCNVTSELE GNVCQRSGSD MFGFSNPQIR QLIQELPNAR SCLKYFENGG 120
DTLRGYRAVH VNWKDLDFCS VCDMDEEYED NLFLQCDKCR MMVHARCYGE LEPLNGVLWL 180
CNLCRPGAPR VSPRCCLCPV TGGAMKPTTD GRWAHLACAI WIPETCLKDV KRMEPIDGLS 240
KINKDRWKLL CSICTVAYGA CIQCSHPTCR VAYHPLCARA ADLCVELEDD DKIHLMLLEE 300
DEDPCIRLLS YCKKHRQPST ERPSLESNLG NPAQLVQTDA ASSSGCARTE PYNFHRRRGQ 360
QQPQVTATAS VKRLYVENMP YIVSGYCQNK VGCDTSCEPI QSVALLDAAS QEASVNVSSM 420
AEKYKSMKAT FRKRLAFGKS RIHGFGVFAK VAHNAGDMMI EYIGELVRPP ISDLRERRIY 480
NSLVGAGTYM FRIDDERVID ATRAGSIAHL INHSCEPNCY SRVISVLGDE HIIIFAKRDI 540
DPWEELTYDY RFVSNEQRLP CYCGFPKCRG VVNDVEAEVQ STKIRVTRSE LFQQKD 596Protein Fasta Sequence
>Traes_5AL_04BEAE2CB.3|Class-I|Triticum aestivum
MHIWPEGYTAFRKFASVKDPHLVTSYKMEVLRNSDIKARPLFRVISEDGLQIDGSTPNACWKEIYCRIKEKQCNVTSELEGNVCQRSGSDMFGFSNPQIRQLIQELPNARSCLKYFENGGDTLRGYRAVHVNWKDLDFCSVCDMDEEYEDNLFLQCDKCRMMVHARCYGELEPLNGVLWLCNLCRPGAPRVSPRCCLCPVTGGAMKPTTDGRWAHLACAIWIPETCLKDVKRMEPIDGLSKINKDRWKLLCSICTVAYGACIQCSHPTCRVAYHPLCARAADLCVELEDDDKIHLMLLEEDEDPCIRLLSYCKKHRQPSTERPSLESNLGNPAQLVQTDAASSSGCARTEPYNFHRRRGQQQPQVTATASVKRLYVENMPYIVSGYCQNKVGCDTSCEPIQSVALLDAASQEASVNVSSMAEKYKSMKATFRKRLAFGKSRIHGFGVFAKVAHNAGDMMIEYIGELVRPPISDLRERRIYNSLVGAGTYMFRIDDERVIDATRAGSIAHLINHSCEPNCYSRVISVLGDEHIIIFAKRDIDPWEELTYDYRFVSNEQRLPCYCGFPKCRGVVNDVEAEVQSTKIRVTRSELFQQKD |
Nucleotide Sequence
(Fasta) | GGCAGGATAG TATCTGATTC AGACCATTTC CATAACAAAA TGCACATATG GCCTGAAGGG 60
TATACTGCTT TCAGGAAGTT CGCATCAGTA AAAGATCCAC ACCTAGTAAC ATCTTACAAA 120
ATGGAAGTAC TGAGGAATTC AGATATTAAA GCACGACCGT TGTTTAGGGT GATCTCGGAA 180
GATGGATTGC AGATTGATGG CTCTACGCCT AATGCATGCT GGAAGGAGAT ATACTGCAGG 240
ATAAAAGAAA AACAGTGCAA TGTTACCTCG GAACTGGAAG GAAATGTTTG TCAGAGATCT 300
GGTTCTGACA TGTTTGGCTT TTCAAACCCA CAAATTAGGC AGCTTATTCA GGAGTTGCCA 360
AATGCAAGGT CGTGTTTGAA GTATTTTGAA AATGGTGGGG ATACCCTCCG TGGTTACAGA 420
GCTGTTCATG TTAATTGGAA AGATCTAGAC TTTTGCAGTG TTTGTGATAT GGATGAGGAG 480
TATGAAGACA ATTTGTTCTT ACAATGTGAC AAGTGCCGTA TGATGGTTCA TGCTCGGTGC 540
TATGGCGAAC TAGAACCATT GAATGGAGTA CTTTGGTTAT GCAACCTGTG CCGACCTGGG 600
GCACCTCGCG TGTCCCCACG ATGCTGCCTA TGTCCTGTCA CAGGGGGTGC AATGAAACCT 660
ACAACAGATG GCCGTTGGGC TCATCTAGCA TGTGCAATAT GGATTCCTGA AACATGCTTA 720
AAAGATGTAA AGAGAATGGA ACCCATTGAT GGATTGAGCA AAATCAACAA GGACCGCTGG 780
AAACTTCTAT GCAGCATTTG TACAGTTGCT TATGGAGCTT GCATACAGTG CTCACATCCT 840
ACTTGTCGAG TTGCATATCA CCCGCTCTGT GCACGTGCTG CTGATCTATG TGTTGAGCTT 900
GAAGATGATG ACAAAATCCA TCTCATGTTA CTTGAGGAGG ATGAGGACCC ATGTATTCGT 960
CTACTCTCGT ATTGCAAGAA GCACAGACAA CCATCTACTG AACGTCCATC TCTTGAAAGT 1020
AATCTTGGTA ACCCTGCTCA GTTAGTTCAG ACAGACGCGG CTTCATCATC TGGTTGTGCA 1080
AGGACTGAGC CCTATAATTT TCACCGGAGA AGAGGCCAAC AACAACCTCA AGTTACAGCT 1140
ACTGCTTCTG TAAAGCGTTT GTATGTGGAG AACATGCCTT ATATTGTTAG TGGCTACTGC 1200
CAAAATAAAG TAGGCTGTGA TACTAGCTGT GAACCAATTC AATCAGTCGC CTTGTTGGAT 1260
GCTGCATCAC AAGAAGCTTC TGTCAATGTG TCTTCTATGG CTGAAAAATA TAAAAGCATG 1320
AAGGCCACAT TCAGGAAGAG ACTAGCTTTT GGAAAATCAA GAATTCATGG GTTTGGTGTT 1380
TTTGCAAAGG TTGCACACAA TGCAGGAGAC ATGATGATCG AATACATAGG GGAGCTTGTT 1440
AGGCCACCGA TATCAGACCT TAGAGAGCGG CGTATATACA ACTCTTTGGT GGGTGCTGGG 1500
ACATACATGT TCAGGATAGA TGATGAGCGT GTTATTGACG CTACACGAGC AGGAAGCATA 1560
GCCCATTTGA TCAATCACTC ATGCGAGCCT AATTGTTATT CGCGTGTGAT AAGTGTTCTT 1620
GGGGATGAGC ATATCATCAT TTTTGCAAAG CGGGATATAG ACCCATGGGA AGAGTTGACC 1680
TATGATTATA GGTTTGTTTC GAATGAACAA CGGCTTCCTT GTTATTGTGG ATTTCCAAAA 1740
TGCCGGGGAG TTGTTAATGA TGTTGAAGCA GAGGTCCAAT CAACCAAAAT AAGAGTCACC 1800
AGAAGTGAAT TATTTCAGCA AAAAGACTAA TGGTCAGTCC TTCCTATGCA AGTGTTAGTG 1860
GGAAGTCGAA CTACCGACAA TATTTATCAT TTTATCTATT TCTCCAATTC AATAATAAAT 1920
GGCGGCACAT TGCTTGTGGT GTCTGATGCC CTATCGACGT TTCTTTGGGT GCAAGCTCTA 1980
ATAATAGATA CACATGATGT GGAGGAAGTC CTCCAAAAAT TATGGAATTT ACATGTTATG 2040
TGTATGACAA TTACAACTCG TCAACACTAA TTAAGGCCTG TATTGCAATG TTAAAGGGGA 2100
TTAGCAATTA CTCCGTATCT GTCATAGGTC TCATGATCGA TGCACAGCAG TTGCGCCCCC 2160
CACCACCAGG GTTGTATGAA CAAGGATTGA TGTTAATTAT TTCTGAACAT GTTATGTGTA 2220
TGACAATTAC AACTCGTCAA CACTAATTAA GGCCTGTATT GCAATGTTGA AGGGGATTAG 2280
CAATTACTCC GTATCTGTCA TAGGTCTCAT GATCGATGCA CAGGAGTTGC GTCCCCCACC 2340
ACCAGGGTTG TGTGAACAAG GATTGATGTT AATTATTTCT GAACATGGTT TAGTTTAGCG 2400
CATGAATATA TAATGTTGAA TGGTTTTTAT TAGTGAGTTG GTTAAAATTT TCATAACACA 2460
CTCTTGGCTT GTGTTGGTTC TCTAGATTGA ATCAGTTAGG ATTGGCTAAA AGCATCCATA 2520
TAAGTTAGTG CATCTCAGCG CTAATACTTG TATATCCCCT CTGGTTACTA CTGCAAAGAC 2580
TTGATCGGGC AGAAAATAAT GGATGTCCCT GGACATGTAC CATGTCTCAA TAATTGTGAA 2640
GACTGGTGCA AAATGGAGCA GTTTGCTGCT TGACATCTGG ATTGGTATAT CATTGTATAA 2700
GCATGAGTCG GTCGCTTTGG CTTGGCGTGG GTTAGACCTA TGGAATAGTG AATTGTTATC 2760
AGGAATGAGG TGGTTATCAG CTTGCTGTTA GGAGCTGGCT ATACTGGTCA TGGAAAGTTT 2820
GATCAGCTTC AGCGCATATC CAAGGGGAGT CCCCATAGCT
2861Nucleotide Fasta Sequence
>Traes_5AL_04BEAE2CB.3|Class-I|Triticum aestivum
GGCAGGATAGTATCTGATTCAGACCATTTCCATAACAAAATGCACATATGGCCTGAAGGGTATACTGCTTTCAGGAAGTTCGCATCAGTAAAAGATCCACACCTAGTAACATCTTACAAAATGGAAGTACTGAGGAATTCAGATATTAAAGCACGACCGTTGTTTAGGGTGATCTCGGAAGATGGATTGCAGATTGATGGCTCTACGCCTAATGCATGCTGGAAGGAGATATACTGCAGGATAAAAGAAAAACAGTGCAATGTTACCTCGGAACTGGAAGGAAATGTTTGTCAGAGATCTGGTTCTGACATGTTTGGCTTTTCAAACCCACAAATTAGGCAGCTTATTCAGGAGTTGCCAAATGCAAGGTCGTGTTTGAAGTATTTTGAAAATGGTGGGGATACCCTCCGTGGTTACAGAGCTGTTCATGTTAATTGGAAAGATCTAGACTTTTGCAGTGTTTGTGATATGGATGAGGAGTATGAAGACAATTTGTTCTTACAATGTGACAAGTGCCGTATGATGGTTCATGCTCGGTGCTATGGCGAACTAGAACCATTGAATGGAGTACTTTGGTTATGCAACCTGTGCCGACCTGGGGCACCTCGCGTGTCCCCACGATGCTGCCTATGTCCTGTCACAGGGGGTGCAATGAAACCTACAACAGATGGCCGTTGGGCTCATCTAGCATGTGCAATATGGATTCCTGAAACATGCTTAAAAGATGTAAAGAGAATGGAACCCATTGATGGATTGAGCAAAATCAACAAGGACCGCTGGAAACTTCTATGCAGCATTTGTACAGTTGCTTATGGAGCTTGCATACAGTGCTCACATCCTACTTGTCGAGTTGCATATCACCCGCTCTGTGCACGTGCTGCTGATCTATGTGTTGAGCTTGAAGATGATGACAAAATCCATCTCATGTTACTTGAGGAGGATGAGGACCCATGTATTCGTCTACTCTCGTATTGCAAGAAGCACAGACAACCATCTACTGAACGTCCATCTCTTGAAAGTAATCTTGGTAACCCTGCTCAGTTAGTTCAGACAGACGCGGCTTCATCATCTGGTTGTGCAAGGACTGAGCCCTATAATTTTCACCGGAGAAGAGGCCAACAACAACCTCAAGTTACAGCTACTGCTTCTGTAAAGCGTTTGTATGTGGAGAACATGCCTTATATTGTTAGTGGCTACTGCCAAAATAAAGTAGGCTGTGATACTAGCTGTGAACCAATTCAATCAGTCGCCTTGTTGGATGCTGCATCACAAGAAGCTTCTGTCAATGTGTCTTCTATGGCTGAAAAATATAAAAGCATGAAGGCCACATTCAGGAAGAGACTAGCTTTTGGAAAATCAAGAATTCATGGGTTTGGTGTTTTTGCAAAGGTTGCACACAATGCAGGAGACATGATGATCGAATACATAGGGGAGCTTGTTAGGCCACCGATATCAGACCTTAGAGAGCGGCGTATATACAACTCTTTGGTGGGTGCTGGGACATACATGTTCAGGATAGATGATGAGCGTGTTATTGACGCTACACGAGCAGGAAGCATAGCCCATTTGATCAATCACTCATGCGAGCCTAATTGTTATTCGCGTGTGATAAGTGTTCTTGGGGATGAGCATATCATCATTTTTGCAAAGCGGGATATAGACCCATGGGAAGAGTTGACCTATGATTATAGGTTTGTTTCGAATGAACAACGGCTTCCTTGTTATTGTGGATTTCCAAAATGCCGGGGAGTTGTTAATGATGTTGAAGCAGAGGTCCAATCAACCAAAATAAGAGTCACCAGAAGTGAATTATTTCAGCAAAAAGACTAATGGTCAGTCCTTCCTATGCAAGTGTTAGTGGGAAGTCGAACTACCGACAATATTTATCATTTTATCTATTTCTCCAATTCAATAATAAATGGCGGCACATTGCTTGTGGTGTCTGATGCCCTATCGACGTTTCTTTGGGTGCAAGCTCTAATAATAGATACACATGATGTGGAGGAAGTCCTCCAAAAATTATGGAATTTACATGTTATGTGTATGACAATTACAACTCGTCAACACTAATTAAGGCCTGTATTGCAATGTTAAAGGGGATTAGCAATTACTCCGTATCTGTCATAGGTCTCATGATCGATGCACAGCAGTTGCGCCCCCCACCACCAGGGTTGTATGAACAAGGATTGATGTTAATTATTTCTGAACATGTTATGTGTATGACAATTACAACTCGTCAACACTAATTAAGGCCTGTATTGCAATGTTGAAGGGGATTAGCAATTACTCCGTATCTGTCATAGGTCTCATGATCGATGCACAGGAGTTGCGTCCCCCACCACCAGGGTTGTGTGAACAAGGATTGATGTTAATTATTTCTGAACATGGTTTAGTTTAGCGCATGAATATATAATGTTGAATGGTTTTTATTAGTGAGTTGGTTAAAATTTTCATAACACACTCTTGGCTTGTGTTGGTTCTCTAGATTGAATCAGTTAGGATTGGCTAAAAGCATCCATATAAGTTAGTGCATCTCAGCGCTAATACTTGTATATCCCCTCTGGTTACTACTGCAAAGACTTGATCGGGCAGAAAATAATGGATGTCCCTGGACATGTACCATGTCTCAATAATTGTGAAGACTGGTGCAAAATGGAGCAGTTTGCTGCTTGACATCTGGATTGGTATATCATTGTATAAGCATGAGTCGGTCGCTTTGGCTTGGCGTGGGTTAGACCTATGGAATAGTGAATTGTTATCAGGAATGAGGTGGTTATCAGCTTGCTGTTAGGAGCTGGCTATACTGGTCATGGAAAGTTTGATCAGCTTCAGCGCATATCCAAGGGGAGTCCCCATAGCT
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
