WERAM Information

Tag Content
WERAM ID WERAM-Tra-0354
Ensembl Protein ID TRAES3BF156000040CFD_t1
Gene Name TRAES_3BF156000040CFD_c1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
TRAES3BF156000040CFD_g TRAES3BF156000040CFD_t1 TRAES3BF156000040CFD_t1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 3.80e-43 149.8 579 829
Organism Triticum aestivum
Domain Profile
  HDM JHDM2
              JHDM2.txt   7 gklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.................................. 60 
                            g lNLa klp   ++ ++g kl  AyG  ++ ++++++tnl + + d+v +l++                                  
  Traes_4AS_93108583B.2 579 GFLNLAAKLPPDALQSEVGLKLLIAYGRQQQPGKSDSVTNLMVKMGDVVHMLMHraemrylcpkslqpeqperiangmavhvnahapv 666
                            679********************************************************************************99997 PP
              JHDM2.txt  61 ......vgilkkkwaeedlkellksieee..eldevtrkrv.qdpkekpgalWhifaakdaekirellekvskeqga...evppdhdp 136
                                  +g   ++++ ++    ++    e   + +  +++      ++pgalW++f+++d++ ++++l    +e+       +++++p
  Traes_4AS_93108583B.2 667 qnlnldMGEQSPEHTVSKSCGPSAGSSAElsSSSHSEQAKTnGVERSQPGALWDVFRRQDVPMLNKYLASNWEELTNnsqAMLSVKHP 754
                            7766664444444444443333333333332111222222202335689*********************9999887444566799** PP
              JHDM2.txt 137 ihdqswyldrklrkrLfeeyGvegwtlvQklgdavlipagapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                            i dq +yl +++++ L+++yG+e+ t+ Q +g+av+ipag+p qv+nl+s+v++a dF+sPE + e++r+ +e r
  Traes_4AS_93108583B.2 755 IYDQAVYLREHHKRVLKDQYGIEPRTFEQHIGEAVFIPAGCPYQVKNLQSTVQLALDFLSPESLRESARMAQEIR 829
                            ***********************************************************************9976 PP
Protein Sequence
(Fasta)		MATSKVHNVD EVLNGHGGTV EPSVAAKPST QQASQCNGAT WENSSMMTRL GTGGCRKGRK 60
AVLPWRFQIG YKRPRSQGLS QDGGSDGLPA TGTSMSTDGT GASKSMDGSR HIGVAAAASV 120
PNKTKVDNGD RHRPMPKNRV AISRESLMAS LQEFRLIYRQ LVAQEKADCG KQEHDLAAFQ 180
VFRERLCVEF DDRRYLGSVP GVHVGDVFDS DAELFLVGLH RSQQSRVDYI NQNGGRTCLA 240
VSIVSYAQQS AQNNNLDFLL HVGSVAATTG QNMEGTDLAL KQSMDTKTHV RVIYRFVMTG 300
REELTYYVYG GLYLVEKFSK EKLREDKHIS TFHLRRLSGQ PSINIHELVE KRMAEPSNGT 360
FTVDISSGLE KIPISAINSI SNEAPAPFRY ISHIQYLRKY QLDPPSGCDC VGRCSDSQKC 420
ACVMKNGGKI PFRKTGGLLE EKPLIYECGP SCKCPPTCRN RVGQHGISFR LQVFKTTSMG 480
WGVRSLDFIP TGHFVCEYIG ELLDNEDAQE RDNDEYLFLI GNNYYDVSRW DNLQKTIPSL 540
MNGPGEEEEN FFAVDALKCG NLARFINHSC TPNLFTQNVL YDHDNKGMPH IMLFACEDIQ 600
PLEPLSYDYN YTIDGVHDSE GNIKKKRCLC GSVECTGWLY
Nucleotide Sequence
(Fasta)		ATGGCGACCT CAAAGGTCCA CAACGTAGAT GAGGTACTCA ATGGCCATGG AGGCACCGTG 60
GAGCCAAGTG TGGCCGCCAA ACCTAGCACC CAGCAGGCCT CTCAGTGCAA CGGCGCTACG 120
TGGGAGAACA GTTCGATGAT GACGAGATTA GGTACGGGTG GTTGCCGCAA GGGGCGCAAG 180
GCCGTATTGC CATGGAGATT TCAGATTGGG TACAAGCGGC CACGGTCACA GGGTTTAAGC 240
CAGGACGGCG GATCCGATGG ACTTCCTGCA ACTGGAACTT CCATGTCCAC TGATGGTACT 300
GGAGCTTCCA AGTCCATGGA TGGTTCCAGG CATATAGGAG TTGCTGCTGC TGCTTCTGTA 360
CCCAACAAAA CGAAGGTTGA CAATGGTGAT CGTCATCGTC CAATGCCAAA GAACAGAGTC 420
GCCATCAGCA GAGAAAGCCT CATGGCTTCT TTGCAGGAAT TCCGGCTAAT TTACAGGCAG 480
CTTGTGGCCC AAGAAAAGGC CGACTGCGGT AAACAAGAAC ATGATCTTGC AGCCTTTCAA 540
GTCTTCAGGG AGAGGCTATG TGTTGAATTT GATGATAGGA GGTACTTGGG TAGCGTTCCT 600
GGAGTTCATG TTGGTGACGT GTTTGATTCG GACGCCGAGC TTTTCCTTGT TGGTCTCCAT 660
CGTTCACAGC AGTCGCGTGT TGATTACATC AATCAGAACG GGGGCAGGAC ATGTCTAGCC 720
GTTAGCATCG TGTCGTACGC GCAACAGTCT GCCCAAAATA ACAATCTGGA TTTCTTGCTA 780
CATGTTGGGT CTGTGGCTGC CACCACTGGC CAGAACATGG AAGGTACCGA CTTGGCGCTA 840
AAGCAGAGTA TGGATACCAA AACACATGTG CGTGTCATTT ATAGGTTTGT TATGACCGGC 900
CGTGAGGAGC TTACATACTA TGTTTATGGT GGTTTATATT TGGTCGAGAA ATTTAGCAAA 960
GAGAAACTGA GGGAAGACAA ACATATTAGC ACTTTTCATC TGAGAAGATT GTCGGGGCAA 1020
CCGAGCATCA ACATTCACGA ACTTGTGGAA AAAAGAATGG CTGAACCATC CAATGGAACT 1080
TTTACTGTAG ATATATCGTC AGGTCTTGAG AAGATCCCTA TATCTGCAAT CAACTCCATA 1140
TCAAACGAGG CCCCGGCTCC ATTTCGCTAC ATTTCACACA TACAATACCT CAGGAAGTAT 1200
CAGCTAGATC CTCCATCAGG TTGTGATTGT GTTGGTCGAT GTTCGGACTC GCAAAAGTGT 1260
GCATGTGTAA TGAAAAATGG TGGGAAGATC CCTTTCAGAA AGACCGGTGG TCTCCTAGAG 1320
GAAAAACCTC TTATTTACGA GTGTGGACCT TCATGCAAGT GCCCTCCAAC TTGTCGCAAT 1380
AGAGTAGGCC AACATGGAAT TAGTTTTCGC CTTCAAGTCT TCAAGACAAC ATCAATGGGT 1440
TGGGGAGTAC GAAGCCTTGA TTTTATACCT ACGGGACATT TTGTGTGTGA ATATATAGGG 1500
GAGTTGTTGG ATAATGAAGA TGCTCAGGAG AGGGATAATG ATGAGTACTT GTTCCTTATT 1560
GGAAACAACT ATTATGATGT ATCCCGCTGG GACAACTTAC AAAAGACTAT CCCCTCACTT 1620
ATGAATGGCC CTGGGGAAGA GGAAGAAAAT TTCTTTGCAG TGGACGCACT GAAATGTGGC 1680
AACCTTGCAA GGTTCATCAA CCATAGCTGC ACCCCTAACC TTTTCACACA AAATGTTCTC 1740
TATGACCATG ACAACAAGGG TATGCCTCAC ATCATGCTCT TTGCTTGTGA GGATATTCAG 1800
CCTCTTGAAC CACTATCATA TGACTATAAT TATACCATAG ATGGGGTCCA TGACTCTGAA 1860
GGTAACATCA AGAAGAAACG ATGCTTATGT GGCTCTGTTG AGTGCACTGG ATGGTTGTAC 1920
TAG 1924
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0077 Sb04g033260.1 Sorghum bicolor 56 0.0 677
WERAM-Orp-0026 OPUNC02G23880.1 Oryza punctata 58 0.0 673
WERAM-Orbr-0032 OB02G33430.1 Oryza brachyantha 59 0.0 672
WERAM-Ori-0049 BGIOSGA014624-PA Oryza indica 54 0.0 665
WERAM-Sei-0063 Si016370m Setaria italica 55 0.0 665
WERAM-Ors-0043 OS04T0544100-01 Oryza sativa 54 0.0 661
WERAM-Org-0046 ORGLA04G0175400.1 Oryza glaberrima 54 0.0 660
WERAM-Orr-0045 ORUFI04G22060.1 Oryza rufipogon 54 0.0 660
WERAM-Orgl-0045 OGLUM04G20420.1 Oryza glumaepatula 53 0.0 656
WERAM-Orb-0045 OBART04G20480.1 Oryza barthii 54 0.0 650
WERAM-Orni-0042 ONIVA04G18710.1 Oryza nivara 54 0.0 649
WERAM-Aet-0077 EMT18003 Aegilops tauschii 52 0.0 645
WERAM-Tru-0095 TRIUR3_33604-P1 Triticum urartu 52 0.0 643
WERAM-Brd-0127 BRADI5G17340.2 Brachypodium distachyon 52 0.0 643
WERAM-Lep-0048 LPERR04G16570.1 Leersia perrieri 53 0.0 635
WERAM-Zem-0017 GRMZM2G021044_P01 Zea mays 52 3e-176 616
WERAM-Orl-0050 KN538984.1_FGP012 Oryza longistaminata 63 1e-147 520
WERAM-Hov-0051 MLOC_5340.1 Hordeum vulgare 62 1e-136 484
WERAM-Pot-0036 POPTR_0003s08130.1 Populus trichocarpa 46 2e-124 443
WERAM-Met-0121 AES94344 Medicago truncatula 46 4e-121 432
WERAM-Glm-0122 GLYMA11G04071.1 Glycine max 45 4e-121 432
WERAM-Viv-0003 VIT_00s0309g00020.t01 Vitis vinifera 45 4e-120 429
WERAM-Sol-0078 Solyc06g060960.1.1 Solanum lycopersicum 44 1e-118 424
WERAM-Prp-0019 EMJ11616 Prunus persica 45 6e-117 419
WERAM-Sot-0083 PGSC0003DMT400068350 Solanum tuberosum 45 6e-117 419
WERAM-Amt-0001 ERN01091 Amborella trichopoda 43 4e-115 412
WERAM-Thc-0040 EOY24196 Theobroma cacao 44 9e-114 408
WERAM-Arl-0129 scaffold_402114.1 Arabidopsis lyrata 41 4e-104 376
WERAM-Orm-0092 OMERI09G05880.1 Oryza meridionalis 41 2e-103 374
WERAM-Art-0053 AT2G35160.1 Arabidopsis thaliana 40 6e-103 372
WERAM-Bro-0077 Bo4g150950.1 Brassica oleracea 40 9e-95 345
WERAM-Brr-0150 Bra030212.1-P Brassica rapa 40 3e-94 343
WERAM-Php-0129 PP1S9_150V6.1 Physcomitrella patens 36 3e-79 293
WERAM-Sem-0004 EFJ22703 Selaginella moellendorffii 38 1e-75 281
Created Date 25-Jun-2016