WERAM Information

Tag Content
WERAM ID WERAM-Sol-0073
Ensembl Protein ID Solyc06g010000.2.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Solyc06g010000.2 Solyc06g010000.2.1 Solyc06g010000.2.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 2.40e-08 34.8 110 747
Organism Solanum lycopersicum
Domain Profile
  Me_Reader PHD
             PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslpeg......kswyCpsCk 51 
                          Cl Cg +++ +k ++qC++  C+ w H++Cv +p+++ ++g      +++yC+ C+
  Solyc06g010000.2.1 110 RCL-CGSSQQADK-IIQCENirCRAWRHVSCVIIPEKRREAGsplalpEKFYCEFCR 164
                         599.*87777766.*********************777777789999999******8 PP
             PHD.txt  27 fHlkCvklp..lsslpegkswyCpsCk 51 
                         +H+ C +l    +  + +++w Cp C 
  Solyc06g010000.2.1 378 VHMGCFDLDifVEMNQRSRKWQCPICL 404
                         8*******975344444469******6 PP
             PHD.txt   6 vCgkddegekemvqCdeCddwfH 28 
                         +C + ++++   v Cd+ +   H
  Solyc06g010000.2.1 728 MC-DGSNNN--TVLCDGIQGSLH 747
                         58.333333..799*98776666 PP
Protein Sequence
(Fasta)		MLSCKDKLAH FRIKELKDVL TQLGLSKQGK KQDLVDRILA ILSNERDSGM CAQKNSVGKE 60
EVAKLVDGIY RKMQVNGATD LASKSQIVSD SSNVKLKEEI EEDTYQMEIR CLCGSSQQAD 120
KIIQCENIRC RAWRHVSCVI IPEKRREAGS PLALPEKFYC EFCRLSRADP FWVTVSMPLF 180
PTKWAVTSAP LDSTNQMQRI EKLFSLSRDD MELLTKQEYD VQAWCMLLND KVEFRMQWPQ 240
YADLQVNGVP VRCINRPDSQ LLGANGRDDG PIITLFSRDG MNKILLTGCD ARIFCFGVRL 300
VRRRTLVQVL NIIPKEPDGE AFDDALARIR RCIGGGTATE NADSDSDLEV VADFITVNLR 360
CPMSGSRMKV AGRFKPCVHM GCFDLDIFVE MNQRSRKWQC PICLKNYSLE HIIIDPYFNR 420
ITSQLQTCGE EVSEIEVKPD GSWRAKAEGD RRSIGDLGRW HLPDGTLLES QDIESKPRTG 480
ILKHVIQEGG SESCGLKVGL KKNRNGLWKI NKPEAMQTYP QRDGVRENVE NHIQNILPMS 540
SSATVSGKEG EDPSVNQDGL INFDFPTNGF ELETVSPNFA PAHGCNDRNP PGPARGAEVI 600
VLSDSDEEDE PFISSASIYN NSHTNAPVVS FAGRPKGISA SCHDNRTLFN DGNPCRGIAK 660
NNEIMTNVWS LPTVNQCAPS FQLFGTAMHQ GSINRTSSTN GYSLPADTGI GSCTLLPESS 720
VDRMNAAMCD GSNNNTVLCD GIQGSLHIFL PLPSNASVEA DVRQPGVSTG VHTEDWVSLR 780
LGAGGGSAVA NGLSSGKPLQ TKDSSLNAFT DTASLVVGAN EGVSLTSRRR SDGPFNFPRQ 840
RRSVRRRCLN IDSDTE 856
Nucleotide Sequence
(Fasta)		ATGCTTAGCT GCAAGGATAA ATTGGCACAT TTTCGAATAA AGGAGCTCAA AGATGTGCTT 60
ACTCAACTTG GTCTCTCAAA GCAAGGAAAG AAGCAGGATC TTGTTGATCG CATATTAGCT 120
ATTCTTTCAA ATGAACGAGA TTCAGGAATG TGTGCACAGA AAAATAGTGT TGGAAAGGAA 180
GAGGTTGCCA AACTTGTTGA TGGAATTTAC AGAAAAATGC AAGTGAATGG GGCAACTGAC 240
CTAGCATCTA AGTCGCAAAT TGTCTCGGAC AGCAGTAATG TAAAGTTAAA AGAGGAAATT 300
GAAGAAGATA CTTACCAGAT GGAGATTCGA TGTCTCTGTG GAAGCTCGCA ACAAGCTGAT 360
AAGATAATTC AGTGTGAAAA TATAAGATGC CGTGCATGGC GACATGTGAG CTGTGTCATC 420
ATTCCGGAAA AACGCAGGGA AGCGGGTTCT CCTCTAGCTT TACCTGAAAA ATTTTACTGT 480
GAATTTTGCA GATTGAGTCG CGCAGATCCG TTCTGGGTGA CGGTGTCAAT GCCTTTATTT 540
CCTACTAAGT GGGCTGTCAC TAGTGCACCT TTAGATAGCA CAAACCAAAT GCAAAGGATT 600
GAAAAATTAT TTTCCCTCAG TAGAGACGAC ATGGAGTTAT TGACGAAGCA GGAATACGAT 660
GTTCAGGCTT GGTGCATGCT TCTCAATGAC AAGGTAGAAT TTAGGATGCA GTGGCCTCAG 720
TATGCTGATT TGCAGGTCAA TGGAGTTCCA GTACGTTGCA TAAATAGACC TGACTCACAA 780
TTATTAGGTG CAAATGGTCG AGATGATGGT CCAATAATCA CACTATTCTC CCGAGATGGA 840
ATGAACAAAA TTTTGTTAAC AGGATGTGAT GCTCGCATCT TTTGCTTTGG AGTTAGACTT 900
GTACGGCGTC GTACTCTCGT ACAGGTTCTC AATATTATCC CTAAAGAGCC AGATGGTGAG 960
GCATTTGATG ATGCTCTTGC TCGCATTCGT CGTTGCATTG GTGGGGGAAC TGCCACTGAA 1020
AATGCTGACA GCGACAGTGA CCTCGAAGTG GTTGCGGATT TTATTACAGT CAATCTTCGA 1080
TGCCCTATGA GTGGTTCAAG AATGAAAGTT GCTGGAAGGT TCAAACCTTG TGTACATATG 1140
GGCTGCTTTG ATCTTGACAT CTTTGTTGAA ATGAATCAAA GGTCGAGGAA GTGGCAATGC 1200
CCAATCTGTC TCAAGAATTA CTCTCTGGAG CATATCATTA TAGATCCGTA TTTCAATCGA 1260
ATCACTTCTC AGCTGCAAAC TTGTGGAGAA GAAGTGTCGG AAATTGAAGT GAAACCTGAT 1320
GGTTCTTGGC GTGCAAAGGC AGAAGGTGAT CGAAGGAGTA TTGGTGATCT CGGACGGTGG 1380
CACTTACCTG ATGGTACTCT TCTTGAATCT CAAGATATAG AGTCAAAGCC CAGGACTGGA 1440
ATTCTTAAGC ATGTTATACA GGAAGGAGGC TCTGAAAGCT GTGGACTTAA AGTTGGGTTG 1500
AAGAAGAATA GAAATGGTTT GTGGAAAATT AACAAACCTG AAGCTATGCA GACATATCCA 1560
CAAAGAGATG GAGTAAGAGA GAACGTAGAA AATCATATTC AAAATATCCT TCCCATGAGC 1620
AGCAGTGCCA CTGTGAGTGG CAAGGAAGGT GAAGATCCCA GTGTTAATCA GGATGGTCTC 1680
ATTAACTTTG ATTTCCCTAC CAATGGGTTT GAACTTGAAA CCGTTTCTCC AAATTTTGCC 1740
CCAGCACATG GTTGTAATGA CCGGAACCCC CCAGGACCAG CTAGAGGTGC TGAAGTTATT 1800
GTCCTTAGTG ATTCTGACGA AGAAGATGAA CCATTCATCT CTTCTGCATC CATTTACAAT 1860
AACAGCCATA CCAATGCACC TGTAGTCTCT TTTGCGGGTA GGCCTAAAGG AATTTCAGCT 1920
TCTTGCCATG ACAACCGGAC ACTTTTTAAT GATGGGAATC CATGCCGGGG AATTGCAAAG 1980
AATAACGAAA TTATGACGAA TGTGTGGTCT TTGCCTACTG TTAACCAGTG TGCCCCAAGC 2040
TTTCAGTTAT TTGGTACAGC TATGCATCAG GGTTCTATCA ACCGTACAAG CTCTACCAAT 2100
GGCTACTCGT TGCCTGCAGA CACTGGCATT GGATCTTGTA CTCTTCTTCC TGAATCTTCC 2160
GTTGATCGTA TGAATGCTGC AATGTGTGAT GGTTCAAATA ACAATACCGT ATTATGTGAC 2220
GGTATTCAAG GATCACTTCA TATATTTCTT CCTCTACCAT CGAATGCATC AGTTGAGGCT 2280
GATGTGCGTC AGCCAGGTGT GTCAACTGGT GTTCACACTG AGGATTGGGT TTCACTTAGG 2340
CTCGGCGCAG GTGGGGGTTC TGCAGTTGCA AATGGGTTGA GCTCAGGGAA GCCGCTGCAA 2400
ACCAAAGACT CTTCCTTGAA CGCATTTACT GACACTGCTT CATTGGTTGT TGGTGCGAAT 2460
GAGGGAGTAT CATTGACGAG CAGGAGAAGA TCAGATGGTC CATTTAATTT TCCTCGCCAA 2520
CGCCGTTCTG TTAGACGGAG ATGTCTAAAT ATTGATTCAG ACACTGAATA GGGAGCCAAT 2580
TGCAGATATG AGGAAAGATG ATACTTGTAC TGGAAAAATG AGGATGATCC CTTGTTTGTA 2640
AGATCTTGTC TGAATCGATC TCTTTTGTCT TGGAGATGAA CATGCATCTA CCAACAAAGA 2700
AACTACCTAC CTTCAACTCA TGTGCTGGAA GTTTAGGAGT TGTGAGTGGT GCGCTCTCAA 2760
CTCTCCACTC TCCAGCTTTT GTATTCTATT ATCTGGACTC GGAATCCCCC GCTCCCATAT 2820
CCACCTTGGT ATTATGGCCA TATAATTGTT TTCATTTTGT GAATGATGCA AGTGAATTGT 2880
ACATTTGGAT AGCTTGAATA GGACAAGCTG ATAGGTTGGT TATC 2925
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 58 0.0 966
WERAM-Met-0101 AES88651 Medicago truncatula 56 0.0 898
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 55 0.0 870
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 54 0.0 857
WERAM-Glm-0141 GLYMA12G07590.1 Glycine max 56 0.0 855
WERAM-Brr-0105 Bra020249.1-P Brassica rapa 52 0.0 812
WERAM-Mua-0008 GSMUA_Achr10P13170_001 Musa acuminata 49 0.0 748
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 48 0.0 729
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 48 0.0 724
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 47 0.0 716
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 47 0.0 715
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 47 0.0 711
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 48 0.0 703
WERAM-Tru-0081 TRIUR3_29937-P1 Triticum urartu 47 3e-170 596
WERAM-Tra-0188 Traes_5BL_09F92E35C.1 Triticum aestivum 47 1e-169 594
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 55 3e-165 579
WERAM-Aet-0041 EMT28925 Aegilops tauschii 55 2e-164 577
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 46 7e-140 495
WERAM-Sem-0107 EFJ20543 Selaginella moellendorffii 37 4e-135 479
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 43 5e-112 402
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 57 9e-94 342
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 44 1e-89 328
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 43 2e-18 92.4
Created Date 25-Jun-2016