| Tag |
Content |
| WERAM ID |
WERAM-Pot-0092 |
| Ensembl Protein ID |
POPTR_0007s14470.1 |
| Gene Name |
POPTR_0007s14470g |
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| Me_Reader |
WD40 |
1.60e-97 |
328 |
20 |
315 |
|
| Organism |
Populus trichocarpa |
| Domain Profile |
Me_Reader WD40
WD40.txt 2 hekelsavkfepaseegaslvaatvgseavtvydcqtq....geikllqkykghdeefysvawtadsnkrhslLasAgdrglirlldveag 88
h+ +s+vkf s++g+ + ++++++++++y + + i +l+ ++gh+++++++a+++ds+ +++sA+d++++rl+dv +g
POPTR_0007s14470.1 20 HKSSISSVKF---SSDGR-FLGSSSADKTIKTYSLSPSspptSPITPLHDFHGHEQGVSDLAFSSDSR----FIVSASDDKTLRLWDVTTG 102
8999******...*****.****************9888888889***********************....9****************** PP
WD40.txt 89 qcikvlvgHknaiaelkFsPkdenlllsaSfdkrvrlWdiktdklkkifeahsdevldvdydlrgslivScgmdgslkiWdvrskrrvcev 179
+ ik+l gH+n+++++ F+P+ + +++s+Sfd++vr+Wd+k +k++k+++ahsd+v+ vd++++gslivS+++dg+++iWd s +++c +
POPTR_0007s14470.1 103 STIKTLHGHTNYVFCVSFNPN-SSMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTCVDFNRDGSLIVSSSYDGLCRIWD--SGTGHCIK 190
*********************.***********************************************************..******** PP
WD40.txt 180 klvddenpeksnrrVdcvrfs.ngdlilsgsldntivlWdirkikqsevavvvLkrfeyskteiyyislsfsvdnkkilvsgdedgkvyvw 269
+l+ddenp+ V++v+fs ng++il+g+ldn ++lW+++ +k +Lk+++++ + +y+is +fs++n+ +v g+ed+++y+w
POPTR_0007s14470.1 191 TLIDDENPP-----VSFVKFSpNGNFILVGTLDNNLRLWNFSTGK-------FLKTYTGHANTKYCISPAFSITNGMYIVGGSEDNCMYLW 269
*********.....*******************************.......*************************************** PP
WD40.txt 270 dlsveaalkakelllklgkvtakimqtsvspnesiiiltaltddnivkiWdr 321
+l+ ++++++kl+++t+++++++++p++++i+++a+ d++vkiW++
POPTR_0007s14470.1 270 ELQ------SRKIVQKLEGHTDTVISVACHPTQNMIASGAIGSDKTVKIWTQ 315
***......*****************************************97 PP
|
Protein Sequence
(Fasta) | MPDPIESYKP YTLTQTLQGH KSSISSVKFS SDGRFLGSSS ADKTIKTYSL SPSSPPTSPI 60
TPLHDFHGHE QGVSDLAFSS DSRFIVSASD DKTLRLWDVT TGSTIKTLHG HTNYVFCVSF 120
NPNSSMIVSG SFDETVRIWD VKSGKCLKVL PAHSDPVTCV DFNRDGSLIV SSSYDGLCRI 180
WDSGTGHCIK TLIDDENPPV SFVKFSPNGN FILVGTLDNN LRLWNFSTGK FLKTYTGHAN 240
TKYCISPAFS ITNGMYIVGG SEDNCMYLWE LQSRKIVQKL EGHTDTVISV ACHPTQNMIA 300
SGAIGSDKTV KIWTQEK 317Protein Fasta Sequence
>POPTR_0007s14470.1|WD40|Populus trichocarpa
MPDPIESYKPYTLTQTLQGHKSSISSVKFSSDGRFLGSSSADKTIKTYSLSPSSPPTSPITPLHDFHGHEQGVSDLAFSSDSRFIVSASDDKTLRLWDVTTGSTIKTLHGHTNYVFCVSFNPNSSMIVSGSFDETVRIWDVKSGKCLKVLPAHSDPVTCVDFNRDGSLIVSSSYDGLCRIWDSGTGHCIKTLIDDENPPVSFVKFSPNGNFILVGTLDNNLRLWNFSTGKFLKTYTGHANTKYCISPAFSITNGMYIVGGSEDNCMYLWELQSRKIVQKLEGHTDTVISVACHPTQNMIASGAIGSDKTVKIWTQEK |
Nucleotide Sequence
(Fasta) | TCTGTCCCTC ACTCTCTTCC CTTACCAGGT AAAGCCCTAA ACCCTTTCAA GAGAAAAACC 60
CTCTCAACAA TAAAAACAAA ATGCCAGACC CAATTGAGTC CTACAAACCC TACACCCTAA 120
CCCAAACCCT ACAAGGCCAC AAATCCTCCA TCTCCTCCGT CAAATTCTCC TCCGACGGCC 180
GTTTCCTCGG CTCTTCCTCC GCTGACAAAA CCATCAAAAC CTATTCCCTC TCCCCCTCTA 240
GTCCTCCCAC TTCCCCAATC ACTCCTCTCC ATGACTTCCA CGGCCACGAA CAAGGCGTCT 300
CCGACCTTGC CTTCTCCTCT GATTCCCGCT TCATTGTCTC TGCCTCCGAC GACAAAACCC 360
TCCGCCTCTG GGACGTCACA ACTGGGTCCA CCATCAAAAC CCTTCACGGG CACACCAATT 420
ATGTGTTTTG CGTCAGCTTT AACCCAAATT CCAGTATGAT TGTTTCGGGT TCTTTTGATG 480
AGACTGTTAG AATTTGGGAT GTGAAGAGTG GAAAGTGTTT GAAGGTGTTG CCTGCCCATT 540
CTGATCCAGT TACATGTGTT GATTTTAATA GAGATGGTTC GCTTATTGTA TCCAGCAGTT 600
ATGATGGCTT GTGTAGGATC TGGGATTCTG GGACTGGTCA TTGCATCAAG ACTTTGATTG 660
ATGATGAAAA TCCACCCGTT TCCTTTGTTA AGTTCTCGCC TAATGGAAAT TTTATTCTTG 720
TTGGCACTTT GGATAACAAT TTGAGGCTTT GGAATTTTTC AACTGGGAAA TTTCTGAAGA 780
CATACACTGG GCATGCCAAT ACAAAATACT GTATTTCGCC TGCCTTTTCC ATAACAAATG 840
GAATGTACAT TGTTGGCGGT TCTGAGGATA ATTGTATGTA CTTGTGGGAG CTTCAAAGCA 900
GGAAAATAGT ACAGAAATTG GAAGGTCACA CTGATACAGT TATATCAGTA GCATGCCATC 960
CCACCCAGAA CATGATCGCA TCCGGTGCAA TAGGCAGTGA CAAGACTGTG AAGATCTGGA 1020
CTCAGGAAAA ATGAGGATTT TTTTTCCTCC GCTAGCAGCT GAGGGAAATG TTTTGCTCGA 1080
TGGCTGAAGC TTCTGCATTT TCCCAGATCC TTATCCTATT GACATGCTTG TAGTTTTGAT 1140
TCATTTAACT ACTGTTCATG TACTCCGAGT ATTTGATGGA ACTCAGTTGT CAAAACTTTT 1200
TATTTATGTA ATTATTGTTA ATTCCCTC
1229Nucleotide Fasta Sequence
>POPTR_0007s14470.1|WD40|Populus trichocarpa
TCTGTCCCTCACTCTCTTCCCTTACCAGGTAAAGCCCTAAACCCTTTCAAGAGAAAAACCCTCTCAACAATAAAAACAAAATGCCAGACCCAATTGAGTCCTACAAACCCTACACCCTAACCCAAACCCTACAAGGCCACAAATCCTCCATCTCCTCCGTCAAATTCTCCTCCGACGGCCGTTTCCTCGGCTCTTCCTCCGCTGACAAAACCATCAAAACCTATTCCCTCTCCCCCTCTAGTCCTCCCACTTCCCCAATCACTCCTCTCCATGACTTCCACGGCCACGAACAAGGCGTCTCCGACCTTGCCTTCTCCTCTGATTCCCGCTTCATTGTCTCTGCCTCCGACGACAAAACCCTCCGCCTCTGGGACGTCACAACTGGGTCCACCATCAAAACCCTTCACGGGCACACCAATTATGTGTTTTGCGTCAGCTTTAACCCAAATTCCAGTATGATTGTTTCGGGTTCTTTTGATGAGACTGTTAGAATTTGGGATGTGAAGAGTGGAAAGTGTTTGAAGGTGTTGCCTGCCCATTCTGATCCAGTTACATGTGTTGATTTTAATAGAGATGGTTCGCTTATTGTATCCAGCAGTTATGATGGCTTGTGTAGGATCTGGGATTCTGGGACTGGTCATTGCATCAAGACTTTGATTGATGATGAAAATCCACCCGTTTCCTTTGTTAAGTTCTCGCCTAATGGAAATTTTATTCTTGTTGGCACTTTGGATAACAATTTGAGGCTTTGGAATTTTTCAACTGGGAAATTTCTGAAGACATACACTGGGCATGCCAATACAAAATACTGTATTTCGCCTGCCTTTTCCATAACAAATGGAATGTACATTGTTGGCGGTTCTGAGGATAATTGTATGTACTTGTGGGAGCTTCAAAGCAGGAAAATAGTACAGAAATTGGAAGGTCACACTGATACAGTTATATCAGTAGCATGCCATCCCACCCAGAACATGATCGCATCCGGTGCAATAGGCAGTGACAAGACTGTGAAGATCTGGACTCAGGAAAAATGAGGATTTTTTTTCCTCCGCTAGCAGCTGAGGGAAATGTTTTGCTCGATGGCTGAAGCTTCTGCATTTTCCCAGATCCTTATCCTATTGACATGCTTGTAGTTTTGATTCATTTAACTACTGTTCATGTACTCCGAGTATTTGATGGAACTCAGTTGTCAAAACTTTTTATTTATGTAATTATTGTTAATTCCCTC
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
