WERAM Information

Tag Content
WERAM ID WERAM-Pot-0043
Ensembl Protein ID POPTR_0004s03270.1
Gene Name POPTR_0004s03270g
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
POPTR_0004s03270 POPTR_0004s03270.1 POPTR_0004s03270.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDM JHDM2 1.90e-52 179.1 457 714
Organism Populus trichocarpa
Domain Profile
  HDM JHDM2
           JHDM2.txt   6 dgklNLasklpknfvrpdlgPklynAyGlateedrklgttnlhldvsdavnilvy.vgilkkkwaeedlkellksieeeeldevtrkrvqd 95 
                          g lN+a +lp+ +++pdlgP ly  yG  ++  + +++t+l+ +  d+vnil +  + ++++++ + +++l+ + +e+  +e  r+ ++d
  POPTR_0004s03270.1 457 SGVLNIAAELPQETLKPDLGPCLYISYGSGESLAQADSVTKLRYNSYDVVNILAHtTDVPVSTKQLNYMRKLMTKHKEQ-NKESNREMFHD 546
                         799****************************************************668999999999999999888777.55888999999 PP
           JHDM2.txt  96 pkek 99 
                         ++++
  POPTR_0004s03270.1 547 GDSD 550
                         8875 PP
           JHDM2.txt  87 evtrkrvqdpkekpgalWhifaakdaekirellekvskeqga...evppdhdpihdqswyldrklrkrLfeeyGvegwtlvQklgdavlip 174
                            + r+++ +e+ ga W++f+++d++k+ e+l+++ +e+      +++ ++pi dq+++ld+++++rL+ee+ +e+w + Q  g+av+ip
  POPTR_0004s03270.1 587 SSNNFRMKKLSESCGAQWDVFRRQDVPKLAEYLRRHFNEFTYtygLQKHMVHPILDQNFFLDASHKMRLKEEFKIEPWSFEQHVGEAVIIP 677
                         44556888889999*************************998666566689**************************************** PP
           JHDM2.txt 175 agapHqvqnlkscvkvaedFvsPEnvkecfrltkeyr 211
                         ag+p q++nlkscv+v  dF+sPEnv+ec++l+ e+r
  POPTR_0004s03270.1 678 AGCPYQIRNLKSCVSVVLDFLSPENVTECIQLIDELR 714
                         *********************************9986 PP
Protein Sequence
(Fasta)		MIKNPFSLSF PHFTLSNKSK LSVTFPRKSG FSGKISKLSL LMEPLPDHLR CKRTDGRQWR 60
CNRRVMEDKK LCEIHHLQGR HRQYRRKVPE TLKLQRKKSK KSSASSSNFE ALSRVSLKEG 120
KLGKFKKKGK KLKRGDLQLD LIRMVLQREM EKRKNKKTKG FSEKESVNNG EEEGEGEELM 180
RDLPNGFMAI SPAKNFGNGN VGSCSGSHVD VKVGGGGFNG VNTARRCFRS KNIEPMPVGK 240
LQDLSKERSK VDKVLHFHYL ICMLLPILKQ INQDQSIEIE IEAKIKVDFH RTCPDCSYSL 300
CLSCCQDIFH GSLHGSVKDS SDNLLYYPTI MDIRGDNLEH FQKHWGRGQP VIVRNVLQST 360
SDVSWDPMVM FCNYLKNNAA RSQNGQATDC LDWFEVEIGV KQMFMGSFKG LTNGNIWHEK 420
LKLKGWLSSN LFQEHFPAHY TDILQALPLP EYMDPISGVL NIAAELPQET LKPDLGPCLY 480
ISYGSGESLA QADSVTKLRY NSYDVVNILA HTTDVPVSTK QLNYMRKLMT KHKEQNKESN 540
REMFHDGDSD SDSDTDTDTE VSKFFFGPVK SSRTSDNLKF YGKHSESSNN FRMKKLSESC 600
GAQWDVFRRQ DVPKLAEYLR RHFNEFTYTY GLQKHMVHPI LDQNFFLDAS HKMRLKEEFK 660
IEPWSFEQHV GEAVIIPAGC PYQIRNLKSC VSVVLDFLSP ENVTECIQLI DELRQLPENH 720
KAKVDSLEVK KMALHSISRA VKEIRELTCA E 751
Nucleotide Sequence
(Fasta)		GTGACCATAA TTCAAGATTT CCTTTTCCTT ATCCCAAAAT CCTCCTATCC TTTTCTTCAT 60
AATTACACCA CTTGCCACTC CCACACTCCC ATGATAAAAA ATCCCTTCTC ACTCTCATTC 120
CCTCACTTCA CTCTATCTAA TAAATCCAAA CTTTCTGTCA CTTTCCCGAG AAAATCAGGA 180
TTTTCCGGGA AAATTTCCAA ACTTTCTCTT TTAATGGAGC CGCTACCGGA CCATCTCCGG 240
TGCAAGAGGA CAGACGGCCG GCAATGGCGG TGCAACCGGC GGGTGATGGA GGATAAGAAG 300
CTCTGTGAAA TTCATCACCT TCAGGGCCGC CATAGGCAGT ATAGGAGGAA AGTGCCCGAG 360
ACTTTGAAGT TGCAGAGAAA GAAGAGCAAG AAATCATCAG CATCAAGTTC TAATTTTGAA 420
GCCCTAAGTA GGGTTTCTTT GAAAGAGGGC AAATTAGGGA AATTTAAGAA GAAAGGAAAG 480
AAATTGAAGA GGGGAGATTT ACAGCTGGAT TTGATAAGGA TGGTTTTACA GAGAGAAATG 540
GAGAAGAGAA AGAATAAGAA AACGAAAGGG TTTTCAGAGA AAGAGAGTGT TAATAATGGT 600
GAAGAAGAAG GTGAAGGGGA AGAGTTAATG AGAGATTTGC CAAATGGGTT CATGGCAATA 660
TCACCTGCCA AGAATTTTGG GAATGGCAAT GTGGGTTCTT GTTCTGGTTC ACATGTTGAC 720
GTTAAGGTTG GAGGGGGTGG TTTCAATGGG GTTAATACTG CTAGAAGATG TTTTAGGTCT 780
AAAAATATTG AGCCAATGCC AGTTGGGAAA TTACAGGACC TGTCCAAGGA GAGAAGTAAA 840
GTTGACAAGG TTCTGCATTT TCATTATTTA ATCTGTATGC TTCTTCCTAT ACTGAAACAA 900
ATAAATCAAG ATCAGAGCAT TGAGATAGAA ATAGAAGCAA AAATAAAAGT GGATTTCCAT 960
AGGACCTGCC CTGATTGTTC CTATAGCCTT TGCTTAAGTT GTTGTCAGGA TATTTTTCAT 1020
GGGAGCTTAC ATGGAAGTGT TAAAGATTCT AGCGATAACC TTTTATATTA TCCAACCATT 1080
ATGGATATTC GTGGTGATAA CCTTGAACAC TTTCAGAAGC ACTGGGGCAG AGGTCAACCT 1140
GTAATTGTTC GTAATGTGCT TCAGAGTACA TCTGATGTGA GCTGGGATCC AATGGTCATG 1200
TTCTGCAATT ATCTTAAGAA TAATGCTGCC AGATCTCAAA ATGGGCAAGC TACAGATTGT 1260
TTGGACTGGT TTGAGGTAGA AATTGGTGTA AAACAGATGT TTATGGGGTC TTTTAAGGGT 1320
CTGACAAATG GCAACATATG GCATGAGAAG CTAAAATTGA AGGGTTGGCT TTCTTCTAAT 1380
TTATTCCAAG AACATTTTCC TGCCCATTAC ACTGACATCC TTCAGGCTCT ACCACTTCCA 1440
GAATACATGG ACCCCATCTC TGGTGTTCTA AACATTGCTG CAGAGTTGCC GCAGGAAACC 1500
TTGAAGCCTG ATCTGGGTCC TTGTCTCTAT ATATCATATG GAAGTGGTGA GAGTCTTGCA 1560
CAGGCCGATT CTGTGACAAA ATTGCGTTAT AATTCATATG ATGTGGTTAA TATTTTGGCA 1620
CATACAACTG ATGTCCCTGT ATCTACAAAA CAGCTTAATT ACATGAGAAA GTTGATGACA 1680
AAGCACAAGG AACAGAATAA AGAGAGCAAT CGAGAAATGT TTCATGATGG GGATTCAGAT 1740
TCTGATTCTG ACACTGATAC TGATACTGAA GTATCAAAAT TTTTCTTTGG ACCTGTTAAA 1800
AGTTCAAGGA CATCAGATAA TCTTAAGTTT TATGGGAAGC ACTCCGAGAG CTCCAATAAT 1860
TTCAGAATGA AAAAACTCTC TGAGTCTTGT GGTGCCCAAT GGGATGTCTT TCGTAGACAG 1920
GATGTTCCCA AGCTTGCAGA ATACCTTAGA AGGCACTTTA ATGAGTTCAC TTACACATAT 1980
GGCTTACAAA AGCATATGGT TCATCCAATA CTTGATCAGA ATTTCTTTCT TGATGCATCT 2040
CATAAAATGA GACTTAAGGA GGAATTCAAA ATTGAACCCT GGAGTTTTGA GCAACATGTT 2100
GGAGAAGCAG TGATTATTCC TGCTGGATGC CCTTACCAAA TTAGGAATCT TAAGTCATGC 2160
GTCAGTGTGG TTTTGGACTT CCTCTCACCA GAAAATGTTA CTGAATGCAT CCAGCTGATT 2220
GATGAGTTAC GACAACTTCC AGAGAACCAT AAAGCCAAAG TAGACAGTTT AGAGGTGAAG 2280
AAAATGGCAT TGCACAGTAT TAGTAGAGCA GTCAAAGAAA TTCGTGAGCT TACATGCGCA 2340
GAGTAAATCC TCATTGAAAT ACATGAATTC AGGGCCAGCA TGGATCTCAA CGACTAACTG 2400
CAAGGACTAA AAATGGATAG ATAATCATAG CAGGGAAGGA TCTGACATGG TGGCATTTGA 2460
GCTTCTGCTG TTATTTCTAG ATGATTGTGC AGGGTATTTT GGTTTCTGCA TCAGCATGTT 2520
TTTTTGCATC CAGAAATTTT GATAGATTCC TCCTCCTTGG TCATTAAAAA GTAATTTTAT 2580
CTCATGGTGC AAAACACCAA TTTTTCCAGA TCAAAGATTG GCATTCATGG TCATTTCAGC 2640
AACAGCTTGT ACATGTGTTC ATTAAGATTA GCATTTTTTT TCTCCTTACT GCAACAGCAT 2700
GTATATATGA TAGATCCATT TGGCTGTATA TGATGATTAA TCCATTTGTT TTTAATAGTG 2760
ATTGATCCTT TCGGGTTTTT TATACAACGT TGAGACGGTT TCTGCGGTCA TATTATTATA 2820
ATTTAATTTT GACCCCCTAT TTTT 2845
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Met-0108 AES90468 Medicago truncatula 53 2e-144 510
WERAM-Glm-0088 GLYMA08G06460.1 Glycine max 50 2e-139 494
WERAM-Sol-0028 Solyc02g079300.2.1 Solanum lycopersicum 47 2e-123 440
WERAM-Thc-0081 EOY28779 Theobroma cacao 46 1e-109 394
WERAM-Art-0009 AT1G11950.1 Arabidopsis thaliana 44 3e-104 377
WERAM-Bro-0174 Bo9g038630.1 Brassica oleracea 42 4e-104 376
WERAM-Arl-0042 fgenesh2_kg.1__ 1301__ AT1G11950.1 Arabidopsis lyrata 44 8e-103 372
WERAM-Prp-0006 EMJ21777 Prunus persica 44 2e-101 367
WERAM-Brr-0086 Bra016801.1-P Brassica rapa 44 4e-100 363
WERAM-Sob-0006 Sb01g015210.1 Sorghum bicolor 44 7e-100 362
WERAM-Sot-0046 PGSC0003DMT400042379 Solanum tuberosum 43 6e-98 355
WERAM-Sei-0128 Si034182m Setaria italica 43 4e-97 353
WERAM-Zem-0137 GRMZM2G417089_P01 Zea mays 43 1e-96 352
WERAM-Viv-0067 VIT_10s0116g00960.t01 Vitis vinifera 42 1e-95 348
WERAM-Lep-0100 LPERR09G06290.1 Leersia perrieri 41 5e-94 343
WERAM-Php-0101 PP1S444_19V6.1 Physcomitrella patens 40 1e-93 341
WERAM-Orm-0094 OMERI09G07170.1 Oryza meridionalis 40 5e-92 336
WERAM-Brd-0109 BRADI4G29617.1 Brachypodium distachyon 39 1e-89 328
WERAM-Orgl-0100 OGLUM09G09380.1 Oryza glumaepatula 41 6e-89 326
WERAM-Orp-0097 OPUNC09G07740.1 Oryza punctata 41 9e-89 325
WERAM-Orr-0107 ORUFI09G09860.1 Oryza rufipogon 41 1e-88 325
WERAM-Orl-0059 KN539156.1_FGP008 Oryza longistaminata 41 1e-88 325
WERAM-Ori-0112 BGIOSGA030706-PA Oryza indica 41 2e-88 324
WERAM-Orb-0104 OBART09G09130.1 Oryza barthii 41 2e-88 324
WERAM-Orni-0101 ONIVA09G08110.1 Oryza nivara 41 3e-88 323
WERAM-Amt-0068 ERN16983 Amborella trichopoda 40 1e-87 322
WERAM-Orbr-0109 OB09G15930.1 Oryza brachyantha 40 3e-86 317
WERAM-Tra-0233 Traes_5DL_9DCF29857.2 Triticum aestivum 40 1e-85 315
WERAM-Ors-0092 OS09T0393200-01 Oryza sativa 42 6e-85 313
WERAM-Aet-0048 EMT13865 Aegilops tauschii 40 1e-84 311
WERAM-Tru-0042 TRIUR3_19853-P1 Triticum urartu 40 4e-84 310
WERAM-Hov-0014 MLOC_13090.1 Hordeum vulgare 40 2e-69 261
WERAM-Org-0036 ORGLA03G0163900.1 Oryza glaberrima 34 2e-64 244
WERAM-Mua-0068 GSMUA_Achr4P05350_001 Musa acuminata 36 2e-62 238
WERAM-Xet-0043 ENSXETP00000014664.3 Xenopus tropicalis 28 3e-39 161
WERAM-Orla-0053 ENSORLP00000006841.1 Oryzias latipes 29 5e-39 160
WERAM-Gam-0008 ENSGMOP00000000972.1 Gadus morhua 28 6e-39 160
WERAM-Fec-0021 ENSFCAP00000001589.3 Felis catus 28 8e-39 159
WERAM-Aim-0189 ENSAMEP00000017468.1 Ailuropoda melanoleuca 28 8e-39 159
WERAM-Nol-0092 ENSNLEP00000010895.1 Nomascus leucogenys 28 8e-39 159
WERAM-Paa-0043 ENSPANP00000002578.1 Papio anubis 28 9e-39 159
WERAM-Caf-0016 ENSCAFP00000001774.3 Canis familiaris 28 9e-39 159
WERAM-Cap-0028 ENSCPOP00000002138.2 Cavia porcellus 28 9e-39 159
WERAM-Dan-0091 ENSDNOP00000009144.3 Dasypus novemcinctus 28 9e-39 159
WERAM-Ptv-0087 ENSPVAP00000007885.1 Pteropus vampyrus 28 9e-39 159
WERAM-Mod-0100 ENSMODP00000015209.4 Monodelphis domestica 29 1e-38 159
WERAM-Poa-0141 ENSPPYP00000017696.1 Pongo abelii 28 1e-38 159
WERAM-Mup-0101 ENSMPUP00000009333.1 Mustela putorius furo 28 1e-38 159
WERAM-Sus-0108 ENSSSCP00000015245.2 Sus scrofa 28 1e-38 159
WERAM-Sah-0129 ENSSHAP00000013821.1 Sarcophilus harrisii 29 1e-38 159
WERAM-Ova-0174 ENSOARP00000017606.1 Ovis aries 28 1e-38 159
WERAM-Chs-0157 ENSCSAP00000009298.1 Chlorocebus sabaeus 28 1e-38 159
WERAM-Mam-0003 ENSMMUP00000000618.2 Macaca mulatta 28 1e-38 159
WERAM-Loa-0020 ENSLAFP00000001269.3 Loxodonta africana 28 1e-38 159
WERAM-Mim-0018 ENSMICP00000001555.1 Microcebus murinus 28 1e-38 159
WERAM-Eqc-0143 ENSECAP00000015928.1 Equus caballus 28 1e-38 159
WERAM-Bot-0099 ENSBTAP00000013278.4 Bos taurus 28 1e-38 159
WERAM-Otg-0093 ENSOGAP00000008081.2 Otolemur garnettii 28 1e-38 159
WERAM-Hos-0102 ENSP00000326563.5 Homo sapiens 28 1e-38 159
WERAM-Orc-0080 ENSOCUP00000007280.2 Oryctolagus cuniculus 28 1e-38 159
WERAM-Myl-0184 ENSMLUP00000015336.2 Myotis lucifugus 28 1e-38 159
WERAM-Pat-0141 ENSPTRP00000029560.2 Pan troglodytes 28 1e-38 159
WERAM-Gog-0012 ENSGGOP00000000822.2 Gorilla gorilla 28 1e-38 159
WERAM-Leo-0085 ENSLOCP00000011676.1 Lepisosteus oculatus 29 2e-38 158
WERAM-Caj-0074 ENSCJAP00000012191.1 Callithrix jacchus 28 2e-38 158
WERAM-Anc-0075 ENSACAP00000007027.2 Anolis carolinensis 29 3e-38 157
WERAM-Fia-0049 ENSFALP00000003539.1 Ficedula albicollis 28 3e-38 157
WERAM-Tar-0009 ENSTRUP00000002076.1 Takifugu rubripes 28 3e-38 157
WERAM-Anp-0111 ENSAPLP00000012780.1 Anas platyrhynchos 28 3e-38 157
WERAM-Mum-0157 ENSMUSP00000037628.7 Mus musculus 28 4e-38 157
WERAM-Meg-0102 ENSMGAP00000010078.1 Meleagris gallopavo 28 4e-38 157
WERAM-Tag-0001 ENSTGUP00000000018.1 Taeniopygia guttata 28 5e-38 157
WERAM-Gaga-0080 ENSGALP00000012399.4 Gallus gallus 28 5e-38 157
WERAM-Ran-0218 ENSRNOP00000067649.2 Rattus norvegicus 28 6e-38 156
WERAM-Ora-0023 ENSOANP00000003317.1 Ornithorhynchus anatinus 28 1e-37 155
WERAM-Dar-0145 ENSDARP00000084278.5 Danio rerio 27 1e-37 155
WERAM-Mae-0023 ENSMEUP00000001666.1 Macropus eugenii 28 1e-37 155
Created Date 25-Jun-2016