WERAM Information


Tag Content
WERAM ID WERAM-Org-0066
Ensembl Protein ID ORGLA06G0264700.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA06G0264700 ORGLA06G0264700.1 ORGLA06G0264700.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-II 4.70e-125 417.8 16 338
HDAC Class-I 1.20e-39 137.4 20 329
Organism Oryza glaberrima
Domain Profile
  HDAC Class-II

        class-2.txt   2 aglvydekmlkhqaleenkekhpEkpeRiqailsrlqeagllekleelkarkatkeelqlvHseehvelletae.klekeelesltvdsdsi 92 
+gl+yde+m++h+++ +++ hpE+peR++ai+++l++ g++++++ +ka++a+++ +++vHs++h++l+++ + k +++ ++++ + +si
ORGLA06G0264700.1 16 VGLLYDERMCAHATPDGEE--HPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISsKEYDSRRNKIARKLNSI 105
689************9999..***************************************************998888999999******** PP
class-2.txt 93 ylesksikaarlavGavlelvdkvlkgelkngfavvRPPGHHaeestamGFClfnnvavaakllqqklk...vkkilivDwDvHhGnGtqei 181
y+++ s+++a la+G+v+e+++kv++gel+ ++a+vRPPGHHae+++amGFClfnnva+aa +l+++ + +kkilivDwDvHhGnGtq++
ORGLA06G0264700.1 106 YFNKGSSESAFLAAGSVIEVAEKVAAGELSSAIALVRPPGHHAEHNEAMGFCLFNNVAIAADYLLNERTdlgIKKILIVDWDVHHGNGTQKM 197
****************************************************************99877777******************** PP
class-2.txt 182 fykdpkvlylSlHRydkgsffpesgsgavdevgegkgegfnvNvawngglmgdaeylaafrevvlpiakeFkPdlvlvsaGfDaaegdplgg 273
fy+dp+vl++S+HR+d gsf+p+ g++++ +geg+g+g+n+Nv+w++g++gda+y+aa+++v+lp+a+ F+Pd+vlvsaGfDaa gdplgg
ORGLA06G0264700.1 198 FYSDPRVLFFSVHRFDYGSFYPAEGDASYCFIGEGDGKGYNINVPWEHGKCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGG 289
******************************************************************************************** PP
class-2.txt 274 lsvtakcyatltkqllklaggrvvlvlEGGynlkaiaeaveavvkaLlg 322
+++t+++ya l +ll++a+gr+v++lEGGynl++ia++v+a++k+Llg
ORGLA06G0264700.1 290 CCITPNGYALLLTKLLGFAQGRIVMALEGGYNLRSIANSVSACAKVLLG 338
***********************************************96 PP

  HDAC Class-I

        class-1.txt   7 ydedvgeyhy..gqkhpmkpkrlsltheLvlnyglskkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvgedc.Pvf 95 
yde++ + + g++hp p+rl+ + + + g+ + i+k+k+a+ ++++++hs+++i++++++++++ ++ +++++ + ++
ORGLA06G0264700.1 20 YDERMCAHATpdGEEHPENPERLRAIWRKLSADGVASRCMIMKAKEAEDKYIASVHSQNHIKLMRSISSKEYDSRRNKIAR---KLNSiYFN 108
555555444344899***********9999999***********************************9998877655443...23330345 PP
class-1.txt 96 dglfeycqlitGasleaakkLnkkeadiainwa.GGlhhakkseasGfcyvnDivlailellkk.....hkrvlyididlhhGDgveeafyt 181
+g e + l +G+ +e a+k+ +e ai hha ++ea Gfc n++ +a ll + k++l +d d+hhG+g ++ fy
ORGLA06G0264700.1 109 KGSSESAFLAAGSVIEVAEKVAAGELSSAIALVrPPGHHAEHNEAMGFCLFNNVAIAADYLLNErtdlgIKKILIVDWDVHHGNGTQKMFYS 200
6788889999*************99888887641456********************99998742233369********************* PP
class-1.txt 182 tdrvmtvsfhkyge.effPgtGdlsd..vgaekgkyyavnvPlkdg.idDesyekifksviskvieafePeavvlqcGaDslagDrlgefnl 269
rv+ s+h+++ +f+P+ Gd s +g+++gk y +nvP ++g + D y + +v+ +v eaf+P++v++ G D+ gD+lg +
ORGLA06G0264700.1 201 DPRVLFFSVHRFDYgSFYPAEGDASYcfIGEGDGKGYNINVPWEHGkCGDADYIAAWDHVLLPVAEAFNPDIVLVSAGFDAALGDPLGGCCI 292
***********98525*******986447999*************9899******************************************* PP
class-1.txt 270 sikghaecvkfvksf.nlpllvlGGGGYtlrnvaRcw 305
+ +g+a + + f + +++ GGY+lr +a
ORGLA06G0264700.1 293 TPNGYALLLTKLLGFaQGRIVMALEGGYNLRSIANSV 329
*******999999996778888889******999765 PP

Protein Sequence
(Fasta)
MAAATTAAPA AAAARVGLLY DERMCAHATP DGEEHPENPE RLRAIWRKLS ADGVASRCMI 60
MKAKEAEDKY IASVHSQNHI KLMRSISSKE YDSRRNKIAR KLNSIYFNKG SSESAFLAAG 120
SVIEVAEKVA AGELSSAIAL VRPPGHHAEH NEAMGFCLFN NVAIAADYLL NERTDLGIKK 180
ILIVDWDVHH GNGTQKMFYS DPRVLFFSVH RFDYGSFYPA EGDASYCFIG EGDGKGYNIN 240
VPWEHGKCGD ADYIAAWDHV LLPVAEAFNP DIVLVSAGFD AALGDPLGGC CITPNGYALL 300
LTKLLGFAQG RIVMALEGGY NLRSIANSVS ACAKVLLGDK FRFDTPDMQP FESSWRVIQA 360
VRDELKTFWP VLSNRLPENI SLRSRPSQIE LYSSGSDSEV EDLPDAIASV NIIQITDGII 420
SESFSKLNLD EDKIATKTTS SNVMVEGPTD SVEPQNDGSA AVSTEGISSL SSTWRSDLSK 480
VYVWYASFGS NMWTPRFLCY IQGGKAEGMN IPCFGSHDTS PPRGSMWKTV PHRLFFGRSS 540
TPCWGTGGVA FLNPEINHTE NSYVCMYKIT LEQFNDVLFQ ENRLVKENGE SGKTESPDSP 600
LIGLSEIEFV SRNKGVHLAP IKDSWYSNVL YLGEEDNLPI LTMTCPSSDV ERCRSGELPL 660
CPPSKTYSAT LIRGLMEGKH LDADAAASYI NTAATRGL 698
Nucleotide Sequence
(Fasta)
ATGGCGGCGG CGACGACCGC CGCGCCGGCG GCGGCGGCGG CGAGGGTGGG GCTGCTGTAC 60
GACGAGAGGA TGTGCGCGCA CGCGACGCCC GACGGGGAGG AGCACCCGGA GAACCCCGAG 120
AGGCTGCGGG CCATCTGGCG CAAGCTCTCC GCCGACGGCG TCGCCTCCAG GTGCATGATC 180
ATGAAAGCGA AGGAAGCTGA GGACAAGTAT ATAGCTTCTG TCCATAGCCA GAACCATATC 240
AAGCTGATGA GGAGTATCAG CTCAAAAGAA TATGATTCCC GTCGAAACAA GATTGCTAGA 300
AAATTGAATT CCATTTACTT CAACAAGGGC TCCTCAGAGT CTGCTTTTCT TGCAGCTGGT 360
TCTGTGATTG AGGTAGCTGA GAAGGTTGCT GCAGGAGAGT TAAGTTCTGC TATTGCTCTA 420
GTCCGACCTC CAGGTCACCA TGCTGAACAT AATGAGGCAA TGGGTTTTTG CCTCTTCAAC 480
AATGTAGCAA TTGCTGCTGA TTATCTCTTA AATGAGAGGA CTGACTTAGG TATCAAGAAG 540
ATATTGATTG TCGATTGGGA TGTTCATCAT GGAAATGGCA CACAAAAGAT GTTTTATAGT 600
GATCCTCGTG TATTGTTCTT TTCAGTTCAC AGATTTGATT ATGGCAGCTT CTATCCTGCT 660
GAAGGGGATG CATCTTACTG TTTCATTGGG GAAGGAGATG GTAAAGGGTA CAACATTAAC 720
GTGCCCTGGG AACATGGAAA ATGTGGTGAT GCAGATTATA TTGCTGCATG GGACCATGTA 780
CTACTTCCTG TTGCTGAAGC ATTTAACCCT GATATAGTCT TGGTGTCTGC TGGGTTTGAT 840
GCAGCACTGG GTGATCCTCT TGGTGGCTGC TGCATCACTC CCAATGGATA TGCTCTGCTA 900
CTGACAAAGC TCTTAGGTTT TGCCCAAGGG AGGATAGTGA TGGCTCTTGA AGGAGGCTAT 960
AACCTTAGAT CCATAGCAAA TTCAGTTAGT GCTTGTGCTA AAGTTTTGTT GGGAGACAAG 1020
TTCAGATTTG ACACTCCTGA TATGCAACCG TTTGAATCTT CATGGAGAGT TATACAAGCG 1080
GTACGTGATG AATTGAAGAC GTTCTGGCCT GTTCTGAGTA ATAGATTGCC AGAGAATATA 1140
TCATTGAGGA GTAGGCCCTC ACAAATTGAG CTGTATTCTT CTGGTTCTGA CTCTGAAGTT 1200
GAAGATCTCC CTGATGCTAT TGCTTCTGTC AATATTATTC AAATTACTGA TGGTATTATA 1260
AGTGAAAGCT TCTCAAAGTT GAACCTTGAT GAAGACAAAA TCGCAACAAA GACCACCTCA 1320
AGTAATGTAA TGGTTGAAGG TCCAACTGAT TCAGTTGAAC CACAAAATGA TGGATCTGCT 1380
GCGGTGTCAA CTGAAGGAAT ATCATCTCTA TCTTCTACTT GGAGATCAGA TCTGTCAAAA 1440
GTATATGTTT GGTATGCCAG CTTTGGTTCA AACATGTGGA CACCAAGGTT TCTGTGCTAC 1500
ATCCAAGGGG GAAAGGCTGA GGGTATGAAT ATACCATGTT TTGGATCTCA TGACACAAGC 1560
CCACCAAGAG GTTCCATGTG GAAGACTGTG CCTCATAGAT TGTTTTTTGG TAGATCCTCT 1620
ACTCCTTGCT GGGGAACTGG TGGTGTTGCT TTTCTCAACC CTGAGATAAA CCACACTGAG 1680
AATTCCTATG TCTGCATGTA TAAAATAACG CTCGAGCAGT TCAATGATGT ATTGTTTCAA 1740
GAGAATCGTT TAGTGAAGGA GAACGGCGAA AGTGGAAAAA CTGAGTCTCC TGACTCTCCT 1800
TTGATTGGCT TGTCTGAAAT AGAGTTTGTT TCCAGAAACA AGGGTGTCCA CCTTGCACCT 1860
ATTAAGGATA GCTGGTACTC CAATGTACTT TACCTTGGGG AGGAGGATAA CCTTCCAATT 1920
CTTACAATGA CATGCCCGTC ATCAGACGTA GAGCGATGCA GATCCGGAGA GCTGCCATTG 1980
TGTCCTCCAT CCAAGACCTA CTCCGCCACC CTGATAAGGG GGCTAATGGA AGGGAAGCAC 2040
CTGGATGCAG ATGCGGCCGC TAGTTACATC AACACTGCAG CTACCAGAGG CCTGTGA 2098
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orgl-0076 OGLUM07G21150.1 Oryza glumaepatula 100 0.0 1390
WERAM-Ori-0088 BGIOSGA026083-PA Oryza indica 99 0.0 1388
WERAM-Ors-0072 OS07T0602200-01 Oryza sativa 99 0.0 1386
WERAM-Orr-0082 ORUFI07G22240.1 Oryza rufipogon 99 0.0 1386
WERAM-Orni-0078 ONIVA07G19970.1 Oryza nivara 99 0.0 1367
WERAM-Lep-0079 LPERR07G18450.1 Leersia perrieri 91 0.0 1266
WERAM-Orbr-0087 OB07G26850.1 Oryza brachyantha 89 0.0 1262
WERAM-Orp-0076 OPUNC07G19850.1 Oryza punctata 90 0.0 1222
WERAM-Orl-0040 KN538895.1_FGP007 Oryza longistaminata 94 0.0 1201
WERAM-Orb-0079 OBART07G21300.1 Oryza barthii 95 0.0 1153
WERAM-Sei-0109 Si029091m Setaria italica 81 0.0 1123
WERAM-Tra-0099 Traes_2DS_DFCAF1EA5.1 Triticum aestivum 79 0.0 1123
WERAM-Sob-0036 Sb02g038550.1 Sorghum bicolor 78 0.0 1101
WERAM-Zem-0143 GRMZM2G457889_P01 Zea mays 79 0.0 1095
WERAM-Brd-0010 BRADI1G22240.1 Brachypodium distachyon 77 0.0 1067
WERAM-Aet-0088 EMT31322 Aegilops tauschii 79 0.0 1039
WERAM-Mua-0066 GSMUA_Achr4P03250_001 Musa acuminata 61 0.0 860
WERAM-Viv-0107 VIT_17s0000g07280.t01 Vitis vinifera 57 0.0 792
WERAM-Glm-0045 GLYMA05G00460.1 Glycine max 56 0.0 768
WERAM-Pot-0045 POPTR_0004s09180.1 Populus trichocarpa 55 0.0 766
WERAM-Art-0146 AT5G61060.1 Arabidopsis thaliana 55 0.0 763
WERAM-Thc-0031 EOY22062 Theobroma cacao 55 0.0 763
WERAM-Brr-0068 Bra012984.1-P Brassica rapa 55 0.0 762
WERAM-Bro-0134 Bo7g098310.1 Brassica oleracea 55 0.0 760
WERAM-Arl-0149 scaffold_802745.1 Arabidopsis lyrata 54 0.0 751
WERAM-Met-0112 KEH32016 Medicago truncatula 54 0.0 738
WERAM-Sol-0055 Solyc03g115150.2.1 Solanum lycopersicum 54 0.0 736
WERAM-Prp-0049 EMJ12067 Prunus persica 58 0.0 687
WERAM-Amt-0091 ERM99985 Amborella trichopoda 53 0.0 655
WERAM-Tru-0053 TRIUR3_22556-P1 Triticum urartu 79 3e-179 626
WERAM-Hov-0018 MLOC_16422.1 Hordeum vulgare 85 1e-175 613
WERAM-Sem-0010 EFJ19764 Selaginella moellendorffii 45 1e-164 577
WERAM-Php-0085 PP1S34_252V6.1 Physcomitrella patens 53 3e-117 420
WERAM-Pof-0022 ENSPFOP00000001799.2 Poecilia formosa 41 8e-89 325
WERAM-Ocp-0057 ENSOPRP00000005096.1 Ochotona princeps 44 1e-87 321
WERAM-Mup-0158 ENSMPUP00000013557.1 Mustela putorius furo 44 2e-86 318
WERAM-Ten-0019 ENSTNIP00000004593.1 Tetraodon nigroviridis 45 3e-86 317
WERAM-Mae-0111 ENSMEUP00000010640.1 Macropus eugenii 45 5e-86 316
WERAM-Aim-0139 ENSAMEP00000013236.1 Ailuropoda melanoleuca 44 5e-86 316
WERAM-Orn-0011 ENSONIP00000001061.1 Oreochromis niloticus 43 9e-86 315
WERAM-Tar-0042 ENSTRUP00000010127.1 Takifugu rubripes 47 1e-85 315
WERAM-Xim-0160 ENSXMAP00000013063.1 Xiphophorus maculatus 44 1e-85 315
WERAM-Eqc-0001 ENSECAP00000001121.1 Equus caballus 43 3e-85 313
WERAM-Myl-0104 ENSMLUP00000008295.2 Myotis lucifugus 45 4e-85 313
WERAM-Dar-0023 ENSDARP00000124246.1 Danio rerio 44 6e-85 312
WERAM-Mum-0115 ENSMUSP00000033501.8 Mus musculus 47 7e-85 312
WERAM-Fec-0031 ENSFCAP00000002366.3 Felis catus 43 7e-85 312
WERAM-Ran-0209 ENSRNOP00000009295.5 Rattus norvegicus 44 8e-85 312
WERAM-Ict-0125 ENSSTOP00000012693.2 Ictidomys tridecemlineatus 47 1e-84 311
WERAM-Lac-0055 ENSLACP00000007918.1 Latimeria chalumnae 45 1e-84 311
WERAM-Anc-0082 ENSACAP00000007918.3 Anolis carolinensis 41 5e-84 310
WERAM-Orc-0102 ENSOCUP00000008741.3 Oryctolagus cuniculus 43 5e-84 310
WERAM-Caf-0161 ENSCAFP00000022990.3 Canis familiaris 43 5e-84 309
WERAM-Dio-0075 ENSDORP00000007462.1 Dipodomys ordii 46 9e-84 308
WERAM-Xet-0155 ENSXETP00000050501.3 Xenopus tropicalis 44 3e-83 307
WERAM-Dan-0022 ENSDNOP00000002136.3 Dasypus novemcinctus 46 4e-83 306
WERAM-Mod-0081 ENSMODP00000012731.2 Monodelphis domestica 46 5e-83 306
WERAM-Ova-0124 ENSOARP00000012678.1 Ovis aries 43 8e-83 305
WERAM-Bot-0122 ENSBTAP00000017618.5 Bos taurus 38 2e-82 304
WERAM-Asm-0181 ENSAMXP00000017644.1 Astyanax mexicanus 41 2e-82 304
WERAM-Pem-0058 ENSPMAP00000006830.1 Petromyzon marinus 43 4e-82 303
WERAM-Cap-0109 ENSCPOP00000008049.2 Cavia porcellus 45 6e-82 302
WERAM-Otg-0144 ENSOGAP00000012420.2 Otolemur garnettii 43 5e-81 300
WERAM-Prc-0036 ENSPCAP00000003334.1 Procavia capensis 43 5e-81 299
WERAM-Asn-0017 CADANIAP00004063 Aspergillus nidulans 41 7e-81 299
WERAM-Sus-0177 ENSSSCP00000022636.1 Sus scrofa 46 7e-81 299
WERAM-Caj-0022 ENSCJAP00000004409.2 Callithrix jacchus 45 1e-80 298
WERAM-Hos-0047 ENSP00000365804.2 Homo sapiens 45 1e-80 298
WERAM-Loa-0047 ENSLAFP00000003196.3 Loxodonta africana 45 1e-80 298
WERAM-Paa-0049 ENSPANP00000006915.1 Papio anubis 45 2e-80 298
WERAM-Chs-0158 ENSCSAP00000009365.1 Chlorocebus sabaeus 45 2e-80 298
WERAM-Gog-0047 ENSGGOP00000004443.2 Gorilla gorilla 45 2e-80 298
WERAM-Mam-0153 ENSMMUP00000021637.2 Macaca mulatta 45 2e-80 298
WERAM-Caa-0034 KGT64501 Candida albicans 37 3e-80 297
WERAM-Drm-0028 FBpp0290988 Drosophila melanogaster 39 5e-80 296
WERAM-Tum-0026 CAZ84932 Tuber melanosporum 41 2e-79 294
WERAM-Poa-0196 ENSPPYP00000022747.2 Pongo abelii 43 2e-79 294
WERAM-Ast-0014 CADATEAP00005667 Aspergillus terreus 41 1e-78 291
WERAM-Nol-0078 ENSNLEP00000009627.2 Nomascus leucogenys 42 4e-78 290
WERAM-Lem-0023 CBX90551 Leptosphaeria maculans 40 6e-78 289
WERAM-Fia-0117 ENSFALP00000010126.1 Ficedula albicollis 39 9e-78 288
WERAM-Meg-0084 ENSMGAP00000008226.2 Meleagris gallopavo 41 1e-77 288
WERAM-Orla-0013 ENSORLP00000001341.1 Oryzias latipes 38 2e-77 288
WERAM-Pat-0185 ENSPTRP00000037550.5 Pan troglodytes 42 2e-77 287
WERAM-Pes-0105 ENSPSIP00000013270.1 Pelodiscus sinensis 41 2e-77 287
WERAM-Tut-0056 ENSTTRP00000004443.1 Tursiops truncatus 43 3e-77 287
WERAM-Anp-0022 ENSAPLP00000003127.1 Anas platyrhynchos 41 4e-77 286
WERAM-Pytr-0015 EDU46537 Pyrenophora triticirepentis 41 4e-77 286
WERAM-Asc-0002 CADACLAP00000048 Aspergillus clavatus 43 4e-77 286
WERAM-Gaa-0053 ENSGACP00000006953.1 Gasterosteus aculeatus 41 7e-77 286
WERAM-Ptv-0077 ENSPVAP00000007213.1 Pteropus vampyrus 44 7e-77 286
WERAM-Gaga-0090 ENSGALP00000014065.4 Gallus gallus 41 7e-77 286
WERAM-Kll-0020 CAG99415 Kluyveromyces lactis 40 1e-76 285
WERAM-Pyt-0023 EFQ89752 Pyrenophora teres 40 2e-76 285
WERAM-Sah-0012 ENSSHAP00000001165.1 Sarcophilus harrisii 42 3e-76 283
WERAM-Coi-0028 EAS30926 Coccidioides immitis 43 2e-75 281
WERAM-Miv-0034 MVLG_04888T0 Microbotryum violaceum 43 2e-75 281
WERAM-Kop-0012 CAY68916 Komagataella pastoris 41 3e-75 280
WERAM-Scj-0031 EEB08679 Schizosaccharomyces japonicus 43 3e-75 280
WERAM-Leo-0130 ENSLOCP00000016135.1 Lepisosteus oculatus 42 9e-75 278
WERAM-Tas-0117 ENSTSYP00000012457.1 Tarsius syrichta 41 2e-74 277
WERAM-Tag-0059 ENSTGUP00000004152.1 Taeniopygia guttata 41 9e-74 275
WERAM-Ora-0108 ENSOANP00000020481.2 Ornithorhynchus anatinus 42 2e-73 274
WERAM-Mao-0002 MGG_01076T0 Magnaporthe oryzae 40 4e-73 273
WERAM-Cae-0008 C10E2.3a Caenorhabditis elegans 40 5e-73 273
WERAM-Asg-0010 AAS51704 Ashbya gossypii 37 5e-73 273
WERAM-Scp-0036 SPBC800.03.1:pep Schizosaccharomyces pombe 43 5e-73 273
WERAM-Zyt-0016 Mycgr3P37223 Zymoseptoria tritici 38 6e-73 273
WERAM-Ere-0078 ENSEEUP00000006690.1 Erinaceus europaeus 39 6e-73 273
WERAM-Lab-0047 EDQ99497 Laccaria bicolor 40 1e-72 272
Created Date 25-Jun-2016