WERAM Information

Tag Content
WERAM ID WERAM-Org-0021
Ensembl Protein ID ORGLA02G0080800.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ORGLA02G0080800 ORGLA02G0080800.1 ORGLA02G0080800.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC Class-I 2.80e-25 90.2 24 120
Organism Oryza glaberrima
Domain Profile
  HDAC Class-I
        class-1.txt   1 kkvayaydedvgeyhygqkhpmkpkrlsltheLvlnygls..kkleivkpkkasaeellkfhseeyieflkkvepenaeelskelkkfnvge 90 
                        ++v+y+yd++vg+y+ygq+hpmkp+r+++th L+ +ygl    k+e+++p  a+  +l++fhs++y+ fl+ v+pe++    + l++fn+g 
  ORGLA02G0080800.1  24 RRVCYFYDPEVGNYYYGQGHPMKPHRVRMTHALLAHYGLLapAKMEVLRPLPARGIDLCRFHSDDYVAFLRAVTPETQLGQVRALRRFNIGP 115
                        589***********************************963369************************************************ PP
        class-1.txt  91 dcPvf 95 
                        dcPv 
  ORGLA02G0080800.1 116 DCPVX 120
                        ***97 PP
Protein Sequence
(Fasta)		MDPSSAGAGG NSLASASCGD AQKRRVCYFY DPEVGNYYYG QGHPMKPHRV RMTHALLAHY 60
GLLAPAKMEV LRPLPARGID LCRFHSDDYV AFLRAVTPET QLGQVRALRR FNIGPDCPVX 120
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 180
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 240
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX 300
XXXXXXXXXX XXXXXXXXXX XXXXXXXXXK YQTGVALGEE LREKLPYNEY YEYFGPEYSL 360
YVAASNMENR NTNKQLEEIK CNILDNLSKL QHAPSVQFEE RIPETKLPEP DEDQDDPDER 420
HDPDSDMLLD DHKPMGHSAR SLIHNIGVKR EITETETKDQ HGKRLTTEHK VPEPMADDLG 480
SSKQVPTADA NSMAINAPGN AKNEPGSSL 509
Nucleotide Sequence
(Fasta)		ATGGACCCCT CGTCGGCGGG CGCGGGCGGC AACTCGCTGG CGTCGGCGTC GTGCGGCGAC 60
GCGCAGAAGC GGCGGGTGTG CTACTTCTAC GACCCGGAGG TGGGCAACTA CTACTACGGT 120
CAGGGCCACC CGATGAAGCC CCACCGGGTG AGGATGACCC ACGCGCTGCT CGCCCACTAC 180
GGCCTCCTCG CCCCGGCCAA GATGGAGGTG CTCCGCCCGC TCCCCGCCCG CGGCATCGAC 240
CTCTGCCGCT TCCACTCCGA CGACTACGTC GCCTTCCTCC GCGCCGTCAC CCCGGAGACC 300
CAGCTCGGCC AGGTCCGCGC CCTCCGCCGC TTCAACATCG GCCCGGACTG CCCCGTCNNN 360
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 420
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 480
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 540
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 600
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 720
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 780
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 840
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 900
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 960
NNNNNNNNNN NNNNNNNNNN NNNNNATAAG TATCAGACAG GAGTTGCACT TGGTGAAGAG 1020
CTACGGGAGA AGTTGCCTTA TAACGAGTAT TATGAATATT TTGGTCCAGA ATACAGTCTT 1080
TACGTTGCAG CAAGTAACAT GGAGAACAGA AATACAAACA AGCAATTGGA GGAAATAAAA 1140
TGCAACATTC TGGACAATCT CTCAAAACTT CAACATGCTC CTAGTGTCCA ATTTGAAGAG 1200
CGAATTCCTG AAACAAAGCT ACCTGAGCCA GATGAAGATC AAGATGATCC AGATGAAAGG 1260
CACGACCCTG ACTCTGATAT GCTGTTGGAT GATCACAAAC CTATGGGACA CTCAGCAAGA 1320
AGCCTTATTC ACAACATCGG AGTTAAGAGA GAAATTACTG AAACAGAGAC CAAAGATCAG 1380
CATGGTAAGA GATTAACAAC TGAACATAAA GTACCAGAAC CGATGGCAGA CGATCTTGGT 1440
TCCTCCAAGC AAGTTCCTAC TGCGGATGCA AATTCGATGG CCATCAACGC GCCAGGCAAC 1500
GCCAAGAATG AACCGGGAAG CTCACTATGA 1531
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Orr-0020 ORUFI02G08620.1 Oryza rufipogon 99 7e-87 318
WERAM-Orp-0021 OPUNC02G07700.1 Oryza punctata 92 2e-78 290
WERAM-Orgl-0022 OGLUM02G08770.1 Oryza glumaepatula 93 4e-76 282
WERAM-Ors-0018 OS02T0214900-01 Oryza sativa 93 5e-75 279
WERAM-Orm-0022 OMERI02G09820.1 Oryza meridionalis 92 1e-73 274
WERAM-Ori-0023 BGIOSGA007785-PA Oryza indica 92 2e-73 274
WERAM-Orni-0019 ONIVA02G09870.1 Oryza nivara 91 8e-73 271
WERAM-Orl-0097 KN540811.1_FGP001 Oryza longistaminata 96 6e-71 265
WERAM-Orb-0021 OBART02G08720.1 Oryza barthii 85 9e-66 248
WERAM-Orbr-0024 OB02G17760.1 Oryza brachyantha 74 2e-60 231
WERAM-Brd-0068 BRADI3G08060.1 Brachypodium distachyon 66 5e-52 202
WERAM-Sob-0066 Sb04g007470.1 Sorghum bicolor 66 2e-51 201
WERAM-Sei-0069 Si016908m Setaria italica 67 1e-50 198
WERAM-Zem-0099 GRMZM2G172883_P01 Zea mays 63 6e-49 192
WERAM-Lep-0023 LPERR02G07360.1 Leersia perrieri 83 1e-46 184
WERAM-Tru-0047 TRIUR3_21298-P1 Triticum urartu 61 2e-45 181
WERAM-Tra-0253 Traes_6AS_5CF7CCD9E.1 Triticum aestivum 61 3e-45 180
WERAM-Aet-0051 EMT16627 Aegilops tauschii 61 4e-44 176
WERAM-Hov-0099 MLOC_71091.1 Hordeum vulgare 78 8e-44 175
WERAM-Bro-0021 Bo1g151980.1 Brassica oleracea 76 2e-43 174
WERAM-Brr-0202 Bra040131.1-P Brassica rapa 76 2e-43 174
WERAM-Pot-0051 POPTR_0004s21950.1 Populus trichocarpa 76 2e-43 174
WERAM-Art-0112 AT4G38130.1 Arabidopsis thaliana 76 3e-43 174
WERAM-Arl-0038 fgenesh1_pm.C_scaffold_7000002 Arabidopsis lyrata 76 3e-43 173
WERAM-Glm-0001 GLYMA0006S50.1 Glycine max 75 4e-42 170
WERAM-Thc-0026 EOX98961 Theobroma cacao 75 6e-42 169
WERAM-Sol-0120 Solyc09g091440.2.1 Solanum lycopersicum 76 7e-42 169
WERAM-Sot-0088 PGSC0003DMT400076252 Solanum tuberosum 76 9e-42 168
WERAM-Viv-0012 VIT_03s0038g04240.t01 Vitis vinifera 75 1e-41 168
WERAM-Met-0084 KEH36404 Medicago truncatula 74 1e-41 168
WERAM-Prp-0056 EMJ02177 Prunus persica 75 3e-41 167
WERAM-Amt-0016 ERM94967 Amborella trichopoda 73 4e-41 166
WERAM-Sem-0132 EFJ35052 Selaginella moellendorffii 71 1e-39 162
WERAM-Php-0050 PP1S223_52V6.1 Physcomitrella patens 71 2e-39 160
WERAM-Mua-0081 GSMUA_Achr5P06320_001 Musa acuminata 54 4e-35 146
WERAM-Osl-0002 ABO94711 Ostreococcus lucimarinus 60 4e-31 133
WERAM-Asm-0120 ENSAMXP00000012237.1 Astyanax mexicanus 56 3e-30 130
WERAM-Gam-0211 ENSGMOP00000020496.1 Gadus morhua 56 3e-30 130
WERAM-Tar-0062 ENSTRUP00000012875.1 Takifugu rubripes 57 3e-30 130
WERAM-Orn-0090 ENSONIP00000010308.1 Oreochromis niloticus 57 5e-30 129
WERAM-Gaa-0072 ENSGACP00000009568.1 Gasterosteus aculeatus 57 5e-30 129
WERAM-Anc-0033 ENSACAP00000004062.3 Anolis carolinensis 55 5e-30 129
WERAM-Ten-0200 ENSTNIP00000020022.1 Tetraodon nigroviridis 57 5e-30 129
WERAM-Xim-0229 ENSXMAP00000019038.1 Xiphophorus maculatus 57 6e-30 129
WERAM-Pof-0034 ENSPFOP00000002952.2 Poecilia formosa 57 6e-30 129
WERAM-Orla-0192 ENSORLP00000021872.1 Oryzias latipes 56 7e-30 129
WERAM-Gaga-0034 ENSGALP00000005212.3 Gallus gallus 56 8e-30 129
WERAM-Drm-0018 FBpp0073173 Drosophila melanogaster 57 8e-30 129
WERAM-Ora-0012 ENSOANP00000001904.1 Ornithorhynchus anatinus 57 8e-30 129
WERAM-Tag-0022 ENSTGUP00000001473.1 Taeniopygia guttata 56 9e-30 129
WERAM-Ran-0062 ENSRNOP00000012854.5 Rattus norvegicus 57 1e-29 129
WERAM-Ocp-0006 ENSOPRP00000000780.1 Ochotona princeps 56 1e-29 129
WERAM-Mum-0093 ENSMUSP00000099657.4 Mus musculus 56 1e-29 129
WERAM-Ova-0221 ENSOARP00000022517.1 Ovis aries 56 1e-29 128
WERAM-Loa-0056 ENSLAFP00000004079.2 Loxodonta africana 56 1e-29 128
WERAM-Bot-0118 ENSBTAP00000016877.5 Bos taurus 56 1e-29 128
WERAM-Xet-0037 ENSXETP00000011480.3 Xenopus tropicalis 56 1e-29 128
WERAM-Pem-0096 ENSPMAP00000010023.1 Petromyzon marinus 56 1e-29 128
WERAM-Tub-0143 ENSTBEP00000015305.1 Tupaia belangeri 55 2e-29 128
WERAM-Dar-0035 ENSDARP00000051798.4 Danio rerio 56 2e-29 128
WERAM-Leo-0014 ENSLOCP00000002993.1 Lepisosteus oculatus 56 2e-29 128
WERAM-Orc-0030 ENSOCUP00000003186.2 Oryctolagus cuniculus 55 2e-29 127
WERAM-Ict-0103 ENSSTOP00000010833.2 Ictidomys tridecemlineatus 55 2e-29 127
WERAM-Otg-0072 ENSOGAP00000005101.2 Otolemur garnettii 55 2e-29 127
WERAM-Mup-0173 ENSMPUP00000015122.1 Mustela putorius furo 55 2e-29 127
WERAM-Caf-0116 ENSCAFP00000015619.3 Canis familiaris 55 2e-29 127
WERAM-Myl-0152 ENSMLUP00000012593.2 Myotis lucifugus 55 2e-29 127
WERAM-Cap-0092 ENSCPOP00000006985.2 Cavia porcellus 55 2e-29 127
WERAM-Ptv-0152 ENSPVAP00000012567.1 Pteropus vampyrus 56 2e-29 127
WERAM-Nol-0026 ENSNLEP00000003167.1 Nomascus leucogenys 55 2e-29 127
WERAM-Aim-0087 ENSAMEP00000008076.1 Ailuropoda melanoleuca 55 2e-29 127
WERAM-Hos-0092 ENSP00000362649.3 Homo sapiens 55 2e-29 127
WERAM-Gog-0132 ENSGGOP00000011454.2 Gorilla gorilla 55 2e-29 127
WERAM-Dan-0175 ENSDNOP00000033349.1 Dasypus novemcinctus 56 3e-29 127
WERAM-Ect-0064 ENSETEP00000006883.1 Echinops telfairi 54 4e-29 126
WERAM-Paa-0030 ENSPANP00000015145.1 Papio anubis 54 5e-29 126
WERAM-Mod-0165 ENSMODP00000022264.3 Monodelphis domestica 54 5e-29 126
WERAM-Chs-0191 ENSCSAP00000011772.1 Chlorocebus sabaeus 54 5e-29 126
WERAM-Fia-0139 ENSFALP00000011453.1 Ficedula albicollis 54 5e-29 126
WERAM-Sus-0028 ENSSSCP00000004781.2 Sus scrofa 54 8e-29 125
WERAM-Mam-0073 ENSMMUP00000011716.2 Macaca mulatta 54 9e-29 125
WERAM-Pat-0155 ENSPTRP00000049696.3 Pan troglodytes 54 1e-28 125
WERAM-Poa-0153 ENSPPYP00000018964.2 Pongo abelii 54 1e-28 125
WERAM-Prc-0089 ENSPCAP00000007999.1 Procavia capensis 54 2e-28 124
WERAM-Mel-0028 EGG09787 Melampsora laricipopulina 55 2e-28 124
WERAM-Tut-0167 ENSTTRP00000014262.1 Tursiops truncatus 54 3e-28 124
WERAM-Cii-0014 ENSCINP00000005410.3 Ciona intestinalis 54 9e-28 122
WERAM-Lac-0087 ENSLACP00000011092.1 Latimeria chalumnae 54 4e-27 120
WERAM-Pes-0020 ENSPSIP00000004435.1 Pelodiscus sinensis 53 4e-27 120
WERAM-Meg-0022 ENSMGAP00000001598.1 Meleagris gallopavo 54 5e-27 119
WERAM-Put-0006 PTTG_04745P0 Puccinia triticina 54 5e-27 119
WERAM-Sah-0124 ENSSHAP00000012846.1 Sarcophilus harrisii 54 5e-27 119
WERAM-Mae-0008 ENSMEUP00000000621.1 Macropus eugenii 54 6e-27 119
WERAM-Eqc-0167 ENSECAP00000018023.1 Equus caballus 54 6e-27 119
WERAM-Caj-0192 ENSCJAP00000033421.2 Callithrix jacchus 54 6e-27 119
Created Date 25-Jun-2016