WERAM Information

Tag Content
WERAM ID WERAM-Zem-0020
Ensembl Protein ID GRMZM2G025703_P02
Gene Name PHD43 Zm.33154
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
GRMZM2G025703 GRMZM2G025703_T02 GRMZM2G025703_P02
GRMZM2G025703 GRMZM2G025703_T03 GRMZM2G025703_P03
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 4.70e-15 57.1 17 118
Organism Zea mays
Domain Profile
  Me_Reader PHD
            PHD.txt  3 iClvCgkddegekemvqCde..Cd.dwfHlkCvklplsslpeg.....kswyCpsC 50
                       +C vCg ++e +k ++ Cd+  C  + +H++C++ +  ++ ++     + wyCpsC
  GRMZM2G025703_P02 17 CCKVCGGPEEVDKRFLICDHylCLyKYYHISCLTTE--QIASDvqmgsQRWYCPSC 70
                       8****877777777*********999**********..444444455677****** PP
            PHD.txt   4 ClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 
                        C+vC  +d+++++++ Cd Cd+ +Hl+C+++p++++p+g +w C+ Cke
  GRMZM2G025703_P02  72 CRVCL-CDTDDDQIILCDCCDQGYHLYCLSPPRRKVPKG-HWDCEPCKE 118
                        78873.3444445**************************.*******97 PP
Protein Sequence
(Fasta)		MDPSELPELS RTAMLICCKV CGGPEEVDKR FLICDHYLCL YKYYHISCLT TEQIASDVQM 60
GSQRWYCPSC LCRVCLCDTD DDQIILCDCC DQGYHLYCLS PPRRKVPKGH WDCEPCKERR 120
EKEKRILMLH RKDYDEDILK SGEFHGPNLL LKAAKKVKRD EEVKVAKTKS TRK 173
Nucleotide Sequence
(Fasta)		GTCCTGATCG TGAAAGATAA CCTTTTCAAA CTGCTATTTT AGGTACCAGT GGCACATACA 60
TCATGAGAAT GAAGAGTTGA ACCAAGATGA GAAGTGGTAG TGTGCTGGAT CCTCCCCTCT 120
TTTTTTTGGA AGAAGGCAGG AGCGTTGCCT TGAACAATTA AGGAGGAGCG TTCCTCCCCT 180
CTTGAGCTGT ATCCAATATA TATCTCTCTC CCGCACATCT TCCCTGGATA CCGTGCTCCT 240
CTTGCACTCC CCCAAAACGC AGCTCCCTCA GCCAATCTTC CCCAGAGCGC GGCTAGGCAC 300
AGGCATCTGA AGTATGGACC CCTCTGAACT TCCGGAGCTG TCCCGTACTG CTATGTTGAT 360
CTGCTGCAAG GTGTGTGGAG GACCTGAAGA GGTGGACAAG AGGTTCCTGA TCTGTGACCA 420
CTATCTTTGC CTGTACAAGT ACTACCACAT TAGTTGCCTG ACTACCGAGC AGATTGCAAG 480
TGATGTGCAG ATGGGCAGCC AGCGCTGGTA CTGTCCATCT TGCCTCTGCC GTGTCTGCCT 540
GTGCGACACG GACGATGACC AGATCATCCT GTGTGACTGC TGCGATCAGG GCTATCATCT 600
CTACTGCCTC AGTCCTCCAA GAAGAAAGGT GCCCAAGGGG CATTGGGACT GCGAACCCTG 660
CAAGGAGCGG AGGGAGAAGG AGAAGAGGAT ACTGATGCTC CACAGGAAGG ATTACGATGA 720
AGACATCCTG AAGAGTGGCG AGTTCCATGG ACCGAACTTG CTGCTTAAGG CCGCGAAAAA 780
GGTGAAGCGC GATGAGGAGG TGAAGGTGGC TAAGACTAAG AGCACCAGAA AGTAAGAGGC 840
ATGGAGATTG TGAGCGAGCG GATTTTGTGT TCTCTGCCAT GATCAGCTAG CGCCAAGTTT 900
CTGCCCTGGG AGGCTCAGCT CTGCCCAGCT GAATGGGACG GGCGGCTGAG GGCCGTAGAA 960
ACCTGTGCTT TCTGAACTGA ATGGTTAGAG AACATGAATT CGCTAGAATT GCTCCAGTCT 1020
ATTTCTTTAC AATCGTTTCT TTCAACCCGG CAGGGTCATA CTTGACAAAC TTGCCAGCGC 1080
CTGAACTTGA GAAGGTTGTG ATCACCCGTG ATGCTTTTAA ACCCCGTGAT GCTTTTAATG 1140
GTTTATGAAA CTGGATCTTG GTAGACTTAA TTACCCGTGA TGCTTTTAAT GGTTTATGGA 1200
ACTGAATCTT GGTAGAATTA AAGTATCTGT TGCTGTGTT
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Sob-0056 Sb03g041890.1 Sorghum bicolor 73 3e-49 191
WERAM-Sei-0014 Si003012m Setaria italica 53 5e-31 130
WERAM-Brd-0051 BRADI2G40700.1 Brachypodium distachyon 52 4e-30 127
WERAM-Orbr-0006 OB01G28790.1 Oryza brachyantha 56 7e-30 127
WERAM-Tra-0124 Traes_3DL_9A4F03809.2 Triticum aestivum 53 7e-30 127
WERAM-Aet-0023 EMT29753 Aegilops tauschii 53 9e-30 126
WERAM-Org-0006 ORGLA01G0155400.1 Oryza glaberrima 51 2e-29 125
WERAM-Ori-0006 BGIOSGA001450-PA Oryza indica 52 2e-29 125
WERAM-Orb-0004 OBART01G18970.1 Oryza barthii 52 2e-29 125
WERAM-Orl-0105 KN541449.1_FGP002 Oryza longistaminata 52 2e-29 125
WERAM-Orgl-0005 OGLUM01G22570.1 Oryza glumaepatula 52 2e-29 125
WERAM-Orr-0005 ORUFI01G21360.1 Oryza rufipogon 52 2e-29 125
WERAM-Orni-0004 ONIVA01G21500.1 Oryza nivara 52 2e-29 125
WERAM-Orp-0005 OPUNC01G19360.2 Oryza punctata 53 4e-29 124
WERAM-Lep-0006 LPERR01G16460.1 Leersia perrieri 53 6e-29 124
WERAM-Mua-0027 GSMUA_Achr11P18730_001 Musa acuminata 51 3e-28 121
WERAM-Hov-0006 MLOC_11639.4 Hordeum vulgare 50 2e-27 119
WERAM-Tru-0034 TRIUR3_17458-P1 Triticum urartu 50 4e-27 117
WERAM-Ors-0007 OS01T0883400-00 Oryza sativa 51 4e-25 111
WERAM-Orm-0012 OMERI01G36430.1 Oryza meridionalis 51 4e-25 111
WERAM-Pot-0025 POPTR_0002s07740.1 Populus trichocarpa 49 2e-20 95.5
WERAM-Viv-0110 VIT_18s0001g01580.t01 Vitis vinifera 38 4e-18 88.2
WERAM-Bro-0111 Bo6g083390.1 Brassica oleracea 42 4e-17 84.7
WERAM-Met-0070 KEH35359 Medicago truncatula 41 5e-17 84.3
WERAM-Brr-0015 Bra003689.1-P Brassica rapa 40 9e-17 83.6
WERAM-Art-0031 AT1G77250.1 Arabidopsis thaliana 50 1e-16 83.2
WERAM-Glm-0181 GLYMA14G24986.1 Glycine max 48 2e-16 82.0
WERAM-Thc-0098 EOY16466 Theobroma cacao 53 4e-16 81.3
WERAM-Arl-0020 fgenesh1_pg.C_scaffold_2001986 Arabidopsis lyrata 49 7e-16 80.5
WERAM-Prp-0045 EMJ26345 Prunus persica 46 3e-13 72.0
WERAM-Sot-0052 PGSC0003DMT400046397 Solanum tuberosum 47 9e-12 67.0
WERAM-Sol-0066 Solyc04g058190.2.1 Solanum lycopersicum 50 5e-11 64.3
WERAM-Amt-0050 ERN13236 Amborella trichopoda 48 1e-09 60.1
WERAM-Poa-0043 ENSPPYP00000005112.2 Pongo abelii 35 3e-08 55.5
WERAM-Myl-0127 ENSMLUP00000010258.2 Myotis lucifugus 35 3e-08 55.5
WERAM-Aim-0081 ENSAMEP00000007326.1 Ailuropoda melanoleuca 35 3e-08 55.5
WERAM-Otg-0138 ENSOGAP00000012066.2 Otolemur garnettii 35 3e-08 55.1
WERAM-Pat-0041 ENSPTRP00000041051.3 Pan troglodytes 35 3e-08 55.1
WERAM-Mim-0155 ENSMICP00000015981.1 Microcebus murinus 35 3e-08 55.1
WERAM-Gog-0092 ENSGGOP00000007801.2 Gorilla gorilla 35 3e-08 55.1
WERAM-Hos-0186 ENSP00000301067.7 Homo sapiens 35 3e-08 55.1
WERAM-Ova-0206 ENSOARP00000020382.1 Ovis aries 35 4e-08 54.7
WERAM-Mup-0167 ENSMPUP00000014520.1 Mustela putorius furo 35 4e-08 54.7
WERAM-Caf-0097 ENSCAFP00000012833.4 Canis familiaris 35 4e-08 54.7
WERAM-Chs-0070 ENSCSAP00000002475.1 Chlorocebus sabaeus 35 4e-08 54.7
WERAM-Paa-0006 ENSPANP00000012073.1 Papio anubis 35 4e-08 54.7
WERAM-Fec-0002 ENSFCAP00000000087.3 Felis catus 35 4e-08 54.7
WERAM-Dan-0166 ENSDNOP00000021359.1 Dasypus novemcinctus 35 4e-08 54.7
WERAM-Bot-0131 ENSBTAP00000019193.5 Bos taurus 35 4e-08 54.7
WERAM-Nol-0193 ENSNLEP00000021682.1 Nomascus leucogenys 35 5e-08 54.7
WERAM-Cap-0033 ENSCPOP00000002700.2 Cavia porcellus 34 6e-08 54.3
WERAM-Ran-0263 ENSRNOP00000069442.1 Rattus norvegicus 35 7e-08 53.9
WERAM-Ict-0043 ENSSTOP00000003541.2 Ictidomys tridecemlineatus 35 1e-07 53.5
WERAM-Orc-0058 ENSOCUP00000005384.2 Oryctolagus cuniculus 35 2e-07 52.4
WERAM-Mum-0185 ENSMUSP00000135941.2 Mus musculus 34 3e-07 51.6
WERAM-Ocp-0133 ENSOPRP00000014011.2 Ochotona princeps 36 4e-07 51.6
WERAM-Orn-0146 ENSONIP00000015272.1 Oreochromis niloticus 37 6e-06 47.4
Created Date 25-Jun-2016