WERAM Information

Tag Content
WERAM ID WERAM-Xet-0143
Ensembl Protein ID ENSXETP00000061275.1
Gene Name lmod2
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSXETG00000022132.3 ENSXETT00000065559.1 ENSXETP00000061275.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 6 27
Organism Xenopus tropicalis
Domain Profile
  HAT HAT_other
Query: 495 LKEIKNSLRSISEMKTEEVSRPSTPQRSLHDNLMDAIKGSSIKQLKKVKKVPRF 548
           L+++K ++RS  ++  E +S  STP R+L   L   +K S    LK+++  PRF
Sbjct: 120 LQKVKPAIRSYKKISPELISAASTPARTLR-ILARRLKQSGSTVLKEIES-PRF 171
  Database: Saccharomyces_cerevisiae.R64-1-1.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:46 AM
  Number of letters in database: 3,010,216
  Number of sequences in database:  6692
  
Lambda     K      H
   0.309    0.127    0.345 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6692
Number of Hits to DB: 2,750,640
Number of extensions: 107824
Number of successful extensions: 414
Number of sequences better than 10.0: 19
Number of HSP's gapped: 412
Number of HSP's successfully gapped: 21
Length of query: 550
Length of database: 3,010,216
Length adjustment: 95
Effective length of query: 455
Effective length of database: 2,374,476
Effective search space: 1080386580
Effective search space used: 1080386580
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.7 bits)
S2: 58 (26.9 bits)
Protein Sequence
(Fasta)		MSSFGYRREI SKYEDIDEDE LLASLTAEEL QELERELEDI EPNRNLPVGM RQKSLTEKSP 60
TANFSREALM AYWEKETKKL MEKEQLGACD KNYKEEEDGS DEEDFVGTNS EVSEEIYTEE 120
EEEDEDEEEE EVETESDEEE GNQEEDKDTI CGIADNTEAT KSSDNIPTIK INGLSDNKTL 180
SNGYNGIGAK YSKQANELSV NKASSGLAGS NPTVIDDALE NIKNNDPDTL EVNLNNIENI 240
TPETLISFAL ALKENTYVKV FSLANTHADD NVAMAISNML RVNQNITSLN IESNFITGKG 300
ILAIMRALQY SNKVLTELRF HNQRHIMGSQ VEMEIAKLLK DNTSIIKLGY HFELPGPRMS 360
MTSILTRNMD KQRQRRMQEQ KESGYDPTTN LTTKTLQRGT PGASPYSSPR GSPWSSPKIT 420
RKVQPGNTST PSPPPPPPPP PPPPSILPTL QQEKKVPTRN IAEVIKQHEL SAKKQQNGHK 480
KTKGKKSKKE QNNILKEIKN SLRSISEMKT EEVSRPSTPQ RSLHDNLMDA IKGSSIKQLK 540
KVKKVPRFLK
Nucleotide Sequence
(Fasta)		GTCAGGTCTG GTTTTTCCAG AACCTTGAAC TGTATAAGGG ACCATGTCTT CTTTTGGATA 60
CCGCAGAGAA ATCAGTAAAT ATGAAGATAT TGATGAAGAC GAGCTACTGG CCTCATTAAC 120
GGCAGAGGAG TTGCAGGAAT TAGAGAGGGA GCTGGAGGAT ATTGAGCCGA ACCGGAACCT 180
CCCTGTCGGA ATGAGGCAAA AAAGTCTAAC GGAAAAATCT CCAACAGCGA ATTTTAGCAG 240
AGAAGCACTA ATGGCTTATT GGGAAAAGGA GACCAAAAAG TTAATGGAGA AGGAGCAGCT 300
TGGTGCATGT GATAAGAATT ATAAGGAGGA AGAAGATGGA AGTGATGAAG AGGATTTTGT 360
AGGAACCAAC AGTGAGGTTT CTGAAGAGAT TTACACAGAA GAGGAAGAAG AGGATGAAGA 420
CGAAGAAGAG GAGGAGGTGG AAACAGAAAG TGATGAAGAA GAAGGTAACC AGGAAGAAGA 480
TAAGGATACT ATCTGTGGTA TCGCTGACAA CACTGAAGCT ACAAAAAGTT CTGATAACAT 540
CCCAACAATA AAAATCAATG GACTGAGTGA TAATAAAACA TTGTCCAATG GTTACAATGG 600
CATTGGTGCA AAATACAGCA AACAAGCCAA TGAGCTTTCA GTCAATAAAG CATCTTCTGG 660
CCTTGCTGGC TCCAATCCAA CAGTTATAGA TGATGCTCTA GAAAATATAA AAAACAATGA 720
CCCAGACACT TTGGAAGTCA ATCTAAATAA CATAGAGAAC ATCACACCAG AAACACTTAT 780
ATCCTTTGCA CTTGCTCTAA AAGAAAACAC ATATGTTAAA GTATTTAGCT TGGCTAACAC 840
TCATGCTGAT GACAACGTTG CAATGGCAAT TTCTAATATG CTTCGTGTCA ATCAAAATAT 900
TACAAGTCTA AATATAGAAT CTAACTTCAT CACAGGAAAA GGCATACTAG CTATTATGAG 960
GGCTTTGCAG TACAGCAATA AAGTGCTGAC AGAACTGAGA TTCCATAATC AGAGACATAT 1020
TATGGGAAGT CAGGTGGAGA TGGAAATAGC AAAATTGCTC AAAGACAATA CTAGCATTAT 1080
AAAATTAGGA TATCATTTTG AGCTGCCAGG ACCACGTATG TCCATGACAA GTATTCTGAC 1140
CAGAAATATG GATAAACAAA GACAGAGAAG AATGCAGGAG CAAAAAGAAT CTGGTTATGA 1200
TCCCACAACT AACCTCACAA CCAAAACTCT GCAAAGAGGA ACACCAGGGG CCTCACCATA 1260
TTCTTCCCCT AGAGGTTCAC CATGGTCATC TCCAAAAATA ACTAGAAAGG TTCAGCCTGG 1320
AAACACATCA ACACCTTCAC CTCCACCCCC TCCACCACCC CCACCCCCTC CTCCTTCAAT 1380
TCTTCCAACA CTTCAGCAAG AGAAGAAAGT TCCCACCAGA AATATTGCAG AAGTTATCAA 1440
ACAACATGAA TTATCTGCAA AAAAACAGCA GAATGGGCAT AAAAAAACAA AAGGGAAAAA 1500
AAGTAAAAAG GAACAAAATA ATATTTTGAA AGAGATAAAA AATTCTTTAA GATCAATCTC 1560
TGAAATGAAA ACAGAAGAGG TGTCCAGGCC CTCAACACCC CAGAGATCTC TGCATGATAA 1620
TCTTATGGAT GCTATTAAAG GGAGCAGCAT AAAACAACTG AAGAAGGTAA AAAAGGTGCC 1680
ACGTTTTCTT AAA 1694
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016