WERAM Information


Tag Content
WERAM ID WERAM-Tut-0103
Ensembl Protein ID ENSTTRP00000008572.1
Gene Name EYS
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSTTRG00000009015.1 ENSTTRT00000009042.1 ENSTTRP00000008572.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HDAC HD2 0.4 33
Organism Tursiops truncatus
Domain Profile
  HDAC HD2

Query: 78  LAYSRVPDISYDYEFHLKFQLANNHSAVQDNLLFFTGQKGHGLSGDDFLA 127
L+ + P IS+D F +F+L+ HS + N+ F G K + DDF +
Sbjct: 57 LSQDKFPQISFDLVFDKEFELS--HSGTKANVHFI-GYKSPNIEQDDFTS 103
Database: Arabidopsis_thaliana.TAIR10.31.pep.all.fa
Posted date: Jun 9, 2016 10:44 AM
Number of letters in database: 14,482,851
Number of sequences in database: 35,386

Lambda K H
0.321 0.137 0.457
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 35386
Number of Hits to DB: 10,075,869
Number of extensions: 433717
Number of successful extensions: 837
Number of sequences better than 10.0: 14
Number of HSP's gapped: 837
Number of HSP's successfully gapped: 19
Length of query: 343
Length of database: 14,482,851
Length adjustment: 101
Effective length of query: 242
Effective length of database: 10,908,865
Effective search space: 2639945330
Effective search space used: 2639945330
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 61 (28.1 bits)

Protein Sequence
(Fasta)
DSETWFCDCP RLHSGKQCQF ATCESNPCRN GATCVPKSGT DIVCLCPYGR SGLLCTEAVH 60
ITQPRLSGMD AFGYTSFLAY SRVPDISYDY EFHLKFQLAN NHSAVQDNLL FFTGQKGHGL 120
SGDDFLAVGL RSGRVVYSYN LGSGTASVSS DPLDLSHGIH TVLLGRSFRA GWLKVDDQQN 180
KSXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXXXXXXXX XXXCIFTLQV RTKKNGHFRS 240
LGTPEGHPNA GRSVGQCDAS PCRLMKCGNG GTCVEQGSTV YCNCPSGWKG AFCTETVSTC 300
DPEHDPPHHC SKGATCVSPH GYCHCPLGNT GVYCEQEAQL MLS 343
Nucleotide Sequence
(Fasta)
GATAGTGAAA CTTGGTTTTG TGACTGTCCA AGGCTGCACT CGGGCAAGCA GTGCCAGTTT 60
GCAACTTGTG AAAGCAACCC ATGTAGAAAT GGTGCCACCT GTGTTCCTAA ATCCGGGACA 120
GACATTGTCT GCCTCTGTCC GTATGGACGC TCTGGTCTCC TCTGCACTGA AGCTGTTCAC 180
ATCACCCAGC CCAGGCTCAG TGGGATGGAT GCCTTTGGAT ATACCTCGTT CCTGGCTTAT 240
TCACGGGTCC CAGACATCAG CTATGATTAT GAGTTCCACT TGAAGTTTCA GCTGGCAAAC 300
AACCACTCAG CAGTGCAAGA CAACTTGTTA TTTTTCACCG GACAGAAGGG CCATGGGCTG 360
AGTGGTGATG ACTTCCTGGC TGTGGGTCTG CGCAGCGGCC GCGTGGTTTA CAGTTACAAC 420
CTGGGGTCTG GCACAGCAAG TGTCAGCAGC GATCCCCTCG ATCTGAGCCA TGGGATCCAC 480
ACGGTCCTTC TGGGGAGGTC CTTCCGAGCA GGCTGGCTGA AGGTAGATGA TCAGCAAAAT 540
AAATCCATNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 600
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 660
NNNNNNNGTT GTATTTTTAC TCTGCAAGTT CGCACTAAGA AGAATGGCCA TTTCAGAAGC 720
CTGGGGACGC CTGAGGGCCA CCCAAATGCT GGGCGCAGCG TTGGCCAGTG TGATGCTTCT 780
CCCTGTCGCT TGATGAAATG TGGCAACGGT GGGACGTGTG TGGAGCAGGG ATCGACTGTT 840
TACTGTAACT GTCCTAGTGG ATGGAAAGGA GCCTTTTGCA CGGAGACAGT TTCCACCTGC 900
GACCCTGAGC ATGACCCTCC ACACCACTGC AGCAAAGGAG CAACTTGTGT CTCGCCTCAT 960
GGATACTGTC ACTGTCCACT AGGAAACACT GGAGTCTACT GTGAGCAAGA GGCTCAACTC 1020
ATGCTGTCC
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Fec-0155 ENSFCAP00000015846.2 Felis catus 82 7e-78 288
Created Date 25-Jun-2016