WERAM Information

Tag Content
WERAM ID WERAM-Pem-0047
Ensembl Protein ID ENSPMAP00000005483.1
Gene Name tcp11l1
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPMAG00000004996.1 ENSPMAT00000005504.1 ENSPMAP00000005483.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 0.5 31
Organism Petromyzon marinus
Domain Profile
  HAT HAT_other
Query: 9   DVHTATRSLEKMILAHEIALDPDFSLQRHAPADGSLEKAVTEAMHKA 55
           +   + R + K+IL   +++DP++ LQ+  PA  S +K   E +  A
Sbjct: 95  NTRVSVRDITKIILEFILSIDPNYYLQKVKPAIRSYKKISPELISAA 141
  Database: Saccharomyces_cerevisiae.R64-1-1.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:46 AM
  Number of letters in database: 3,010,216
  Number of sequences in database:  6692
  
Lambda     K      H
   0.321    0.135    0.404 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6692
Number of Hits to DB: 2,018,826
Number of extensions: 64401
Number of successful extensions: 114
Number of sequences better than 10.0: 1
Number of HSP's gapped: 114
Number of HSP's successfully gapped: 1
Length of query: 477
Length of database: 3,010,216
Length adjustment: 94
Effective length of query: 383
Effective length of database: 2,381,168
Effective search space: 911987344
Effective search space used: 911987344
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 57 (26.6 bits)
Protein Sequence
(Fasta)		SPPGLVSPDV HTATRSLEKM ILAHEIALDP DFSLQRHAPA DGSLEKAVTE AMHKAFWDIL 60
ETELSRDPPE FSGALRLMGE IQETLLSLLP SPTRRSPLPE SLDAGLLTQQ AKAGTLDVVE 120
VGDSVVRTMA RLCAPVRDAD VRALARLAED AAGDKGRKDV KTAVSLYREI FRVLDLMKQD 180
YANFSIRCVR PWLQADAGRY EQSQFDRFLR DEPSEWRGTA RRGTARRGEA MHGACPPSYK 240
RSAANXPSQP HLTPQSVLSI QGIFVFGGGG GGGGAYTVAA DRGRLEEAAG HVRRLRVQAS 300
VLLVVRGGGW ARELLRGQHA FLAHAKHVVD ALTQGACHPP AMLAEALGAV SEQLDVDLCR 360
LAEQRGLHET PAAARAALCG QIRDLCKPGN PVASLVASRV NDYLKGVVEG RSSIPMPGGL 420
APVGPELENV AMKYARLVMH NRNVFGTHYL RILCGLIVSP AQAGLPGQTP PSPLPPQ 477
Nucleotide Sequence
(Fasta)		AGCCCTCCCG GCCTGGTGTC CCCCGATGTG CACACGGCCA CCCGGAGCCT GGAGAAGATG 60
ATCCTGGCGC ACGAGATCGC GCTCGACCCC GACTTCAGCC TCCAGCGCCA CGCGCCTGCC 120
GACGGGAGCC TTGAGAAAGC AGTGACGGAA GCGATGCACA AGGCATTCTG GGACATCCTG 180
GAGACGGAGC TGTCGAGGGA TCCCCCAGAA TTCAGTGGGG CGCTGCGTCT CATGGGGGAA 240
ATCCAGGAGA CGCTGCTGTC CCTGCTGCCG AGCCCGACCC GGCGCTCGCC GCTGCCAGAG 300
TCGCTCGACG CCGGACTGCT GACGCAGCAG GCGAAGGCGG GGACGCTGGA CGTGGTGGAG 360
GTGGGCGACT CCGTGGTGCG CACGATGGCG CGGCTGTGCG CGCCCGTGCG CGACGCCGAC 420
GTGCGAGCGC TGGCGCGACT GGCGGAGGAC GCCGCCGGTG ATAAAGGCCG CAAAGATGTC 480
AAGACGGCGG TGTCACTCTA TCGCGAGATC TTCCGAGTGC TGGACCTCAT GAAGCAGGAC 540
TACGCCAACT TCTCCATCCG CTGCGTGCGC CCGTGGCTGC AGGCCGACGC GGGCCGCTAC 600
GAGCAGTCGC AGTTCGACCG CTTCCTGCGC GACGAGCCCA GTGAGTGGCG CGGCACGGCG 660
CGGCGCGGCA CGGCGCGGCG CGGCGAGGCG ATGCACGGCG CTTGTCCCCC GTCGTACAAA 720
CGCTCAGCAG CAAATTNTCC CTCGCAACCG CACTTGACCC CACAGTCTGT TCTCTCTATA 780
CAGGGGATCT TTGTCTTTGG CGGTGGCGGT GGTGGCGGCG GCGCGTATAC GGTGGCGGCG 840
GACCGCGGGC GCCTGGAGGA GGCGGCCGGG CACGTGCGGC GCCTGCGGGT GCAGGCGAGC 900
GTGCTGCTGG TGGTGCGCGG CGGTGGCTGG GCGCGCGAGC TGCTGCGCGG GCAGCACGCG 960
TTCCTCGCTC ACGCCAAGCA CGTCGTGGAC GCGCTCACGC AGGGAGCCTG CCACCCCCCG 1020
GCCATGCTAG CCGAGGCGCT GGGCGCAGTG TCGGAGCAGC TCGACGTCGA TCTGTGCCGC 1080
CTGGCCGAGC AGCGAGGCCT CCACGAGACC CCCGCGGCGG CGCGCGCCGC CCTGTGTGGC 1140
CAGATCCGGG ACCTGTGCAA GCCCGGCAAC CCGGTCGCGT CGCTCGTGGC GAGCCGCGTG 1200
AACGACTACC TAAAAGGGGT TGTGGAAGGA CGGTCGTCCA TTCCGATGCC AGGAGGACTT 1260
GCGCCGGTGG GACCGGAACT GGAAAACGTG GCTATGAAGT ATGCCCGCCT GGTGATGCAC 1320
AACCGCAACG TCTTTGGAAC CCACTACTTG CGCATCCTCT GTGGGCTCAT CGTGTCACCA 1380
GCGCAGGCAG GCCTGCCAGG ACAAACTCCG CCTTCTCCCT TGCCCCCTCA A 1432
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016