WERAM Information

Tag Content
WERAM ID WERAM-Prc-0087
Ensembl Protein ID ENSPCAP00000007733.1
Gene Name C6orf10
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSPCAG00000008200.1 ENSPCAT00000008268.1 ENSPCAP00000007733.1
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 7.40e-01 30
Organism Procavia capensis
Domain Profile
  HAT HAT_other
Query: 370 PESLTKKSEPKRVTLKDQRSRVKQSDTGISKEQESPQKKSDTGIT 414
           PE ++  S P R TL+    R+KQS + + KE ESP+ + D  ++
Sbjct: 135 PELISAASTPAR-TLRILARRLKQSGSTVLKEIESPRFQQDLYLS 178
  Database: Saccharomyces_cerevisiae.R64-1-1.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:46 AM
  Number of letters in database: 3,010,216
  Number of sequences in database:  6692
  
Lambda     K      H
   0.304    0.122    0.331 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6692
Number of Hits to DB: 2,371,867
Number of extensions: 93640
Number of successful extensions: 528
Number of sequences better than 10.0: 62
Number of HSP's gapped: 457
Number of HSP's successfully gapped: 95
Length of query: 537
Length of database: 3,010,216
Length adjustment: 95
Effective length of query: 442
Effective length of database: 2,374,476
Effective search space: 1049518392
Effective search space used: 1049518392
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 43 (21.9 bits)
S2: 58 (26.9 bits)
Protein Sequence
(Fasta)		MAVLITLAII LTLLGLAILI ILLLRWTRHK QSDIEVSRYS SEQSGLLEYE DDRXXXXXXX 60
XXXXXXXXXX XXXXXXXXXX XXXXXXNTKC LQATGERFRK VLGRRXXXXX XXXPSVHLAT 120
SLSNPLWVIN DLESSECPSI NTFTHFRKIS NYKKETNIRK NIETYVISEP CTFVCSVIFP 180
GYTDGELAKK SDPKSQILKS GSITSAQSYQ EESKKPPIKE VIIADSEGSF TLRSKKEPLR 240
RTKDTGLGED KTESETRESD SGIPKGQETQ VEESHWSTQR KGSPRQRDSL WNTRKTGPAE 300
KSDTRMSKAE EAQVKEGDSG IVKAKETQVK DSDAAIPKGQ EAPAEEKDTE IVKEKEAEVK 360
EGDTEISKEP ESLTKKSEPK RVTLKDQRSR VKQSDTGISK EQESPQKKSD TGITKKSESQ 420
AKKSDTGMPK AQESQAKKSD TGIPKQSDTR AKRECQKDKE KNSKAKKSDA SIPKEPEAQA 480
KDKGKKSNEG KKEAEGKKEA EGKKEAEVKG KKVRAPQNRQ VKGRTTKKTK DKSKGRP 537
Nucleotide Sequence
(Fasta)		ATGGCAGTCT TGATAACTTT GGCTATCATC CTGACTCTAC TGGGACTTGC TATTCTGATT 60
ATTTTGCTAC TGAGATGGAC ACGACACAAA CAAAGCGACA TTGAAGTCTC AAGATATAGT 120
TCAGAACAAA GTGGTCTTCT AGAATATGAG GATGATAGAG NNNNNNNNNN NNNNNNNNNN 180
NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN NNNNNNNNNN 240
NNNNNNNNNN NNNNNNGTAA TACAAAATGT TTACAAGCAA CTGGAGAACG TTTTCGTAAA 300
GTACTGGGGA GGAGANNNNN NNNNNNNNNN NNNNNNNGTC CATCTGTGCA TTTAGCTACC 360
TCGTTATCAA ACCCCCTCTG GGTTATCAAT GATCTAGAAA GTTCTGAATG TCCTAGCATA 420
AATACATTTA CCCATTTCAG GAAAATTTCA AATTACAAAA AAGAAACCAA TATCAGGAAA 480
AATATAGAAA CATATGTGAT ATCTGAACCA TGCACTTTTG TGTGCTCAGT TATATTTCCA 540
GGTTACACGG ATGGAGAACT TGCAAAAAAA TCAGACCCTA AATCTCAGAT TCTAAAAAGT 600
GGAAGCATTA CAAGTGCTCA GAGTTATCAA GAAGAAAGCA AGAAACCACC AATAAAAGAA 660
GTCATAATTG CAGATTCTGA GGGATCCTTT ACATTAAGAA GCAAAAAGGA GCCACTAAGA 720
AGAACAAAAG ACACTGGGTT GGGGGAAGAC AAAACAGAAA GCGAAACCAG GGAGAGTGAC 780
TCTGGAATAC CAAAAGGACA GGAGACCCAA GTAGAGGAGA GTCACTGGAG TACTCAAAGG 840
AAAGGAAGCC CAAGACAAAG AGACAGTCTC TGGAATACCA GAAAGACAGG ACCAGCAGAG 900
AAGAGTGACA CTAGAATGTC GAAAGCAGAG GAAGCCCAAG TCAAGGAGGG TGACTCTGGA 960
ATAGTAAAAG CAAAGGAAAC CCAAGTCAAA GATAGTGACG CTGCAATACC AAAAGGACAG 1020
GAAGCCCCAG CAGAGGAGAA AGACACTGAA ATAGTAAAAG AAAAGGAAGC TGAAGTCAAG 1080
GAGGGTGATA CGGAAATATC AAAAGAACCG GAATCCCTAA CAAAGAAGAG TGAGCCAAAA 1140
AGAGTGACAC TAAAAGACCA AAGAAGCCGA GTAAAGCAGA GTGATACTGG AATATCAAAA 1200
GAACAGGAAT CCCCCCAAAA GAAGAGTGAT ACAGGAATAA CAAAAAAATC AGAATCCCAA 1260
GCAAAAAAGA GTGACACTGG AATGCCAAAA GCACAGGAAT CCCAAGCAAA GAAGAGTGAC 1320
ACTGGCATAC CAAAACAGTC AGATACCCGA GCAAAGAGGG AGTGTCAAAA GGACAAGGAA 1380
AAGAACAGCA AAGCAAAGAA GAGTGATGCC TCAATACCAA AAGAACCAGA AGCCCAAGCA 1440
AAGGATAAAG GAAAGAAAAG TAATGAAGGA AAGAAAGAAG CTGAAGGAAA GAAAGAAGCT 1500
GAAGGAAAGA AAGAAGCTGA AGTCAAAGGT AAAAAAGTAC GAGCCCCGCA AAACAGGCAA 1560
GTAAAGGGAA GAACAACAAA AAAGACTAAG GATAAATCGA AGGGGCGCCC ATAA 1615
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016