WERAM Information

Tag Content
WERAM ID WERAM-Cii-0001
Ensembl Protein ID ENSCINP00000000593.2
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
ENSCING00000000330.2 ENSCINT00000000593.2 ENSCINP00000000593.2
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 0.75 30
Organism Ciona intestinalis
Domain Profile
  HAT HAT_other
Query: 120 FLFLDETQTKEYCDAPSKATDTLKEWLNKTSDKIEPVIQVLPNVT---VRPQYKNKYRKL 176
            +F+ +  T  YC+      D        T   +E ++ + PN     V+P  ++ Y+K+
Sbjct: 82  LIFVSKADTNGYCNTRVSVRDI-------TKIILEFILSIDPNYYLQKVKPAIRS-YKKI 133
Query: 177 LPKPASGQSTPVHTPSKNHVRSLAATFNPSNSSAFYQVQKP 217
            P+  S  STP  T     +R LA     S S+   +++ P
Sbjct: 134 SPELISAASTPART-----LRILARRLKQSGSTVLKEIESP 169
  Database: Saccharomyces_cerevisiae.R64-1-1.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:46 AM
  Number of letters in database: 3,010,216
  Number of sequences in database:  6692
  
Lambda     K      H
   0.307    0.125    0.351 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6692
Number of Hits to DB: 2,856,811
Number of extensions: 135212
Number of successful extensions: 507
Number of sequences better than 10.0: 47
Number of HSP's gapped: 505
Number of HSP's successfully gapped: 49
Length of query: 443
Length of database: 3,010,216
Length adjustment: 93
Effective length of query: 350
Effective length of database: 2,387,860
Effective search space: 835751000
Effective search space used: 835751000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 57 (26.6 bits)
Protein Sequence
(Fasta)		MSLILQSETQ QVVKHGQSNG ISFNEIENTD AVQKEPSSPI INNEVNLYHQ TTLGDEIPTV 60
DNEDTFYKNI CQQVVSGDDL TSLLNETSVT QVMKEVNQTT NTSTPATESF TTISANDGLF 120
LFLDETQTKE YCDAPSKATD TLKEWLNKTS DKIEPVIQVL PNVTVRPQYK NKYRKLLPKP 180
ASGQSTPVHT PSKNHVRSLA ATFNPSNSSA FYQVQKPSPS TNDPAQPHFK PEEINSAGSP 240
LLLPSVLGSS GIPVKISSRS VEMNTGSSGG VWKTPGSSKD VGRTLGSSKD VGKTLGSSKD 300
AGKTPEDDRK TVRDSNNSFK ERICSVQLED CMKVELSESE TDISSQDLQN HPENRVDDVG 360
KDPALNKARR FELDDEKRWL TSTPSLVQLF SPQPPCNSLG GVVETPSIHN GVSEKYKQKK 420
SLRVKLQEKD ETDPRNLFYN LGR 443
Nucleotide Sequence
(Fasta)		GAAGATATCT CCACTGTTTC TATGTCTTTA ATATTGCAAA GTGAAACTCA ACAAGTTGTA 60
AAACATGGGC AAAGTAATGG AATAAGTTTT AATGAAATAG AAAATACAGA TGCCGTGCAG 120
AAAGAGCCCA GCTCCCCAAT TATTAACAAT GAGGTGAACT TGTACCACCA AACTACTTTG 180
GGCGACGAGA TCCCGACGGT TGACAACGAG GATACTTTTT ATAAAAACAT TTGTCAGCAA 240
GTTGTTAGCG GGGATGACTT GACAAGTTTG TTGAACGAAA CATCGGTCAC GCAGGTAATG 300
AAGGAGGTGA ATCAAACAAC AAACACATCA ACGCCAGCAA CGGAAAGTTT TACAACAATT 360
TCCGCTAACG ATGGTTTGTT TTTATTCTTG GATGAAACGC AAACGAAGGA ATATTGTGAC 420
GCGCCAAGCA AGGCTACGGA TACATTGAAG GAATGGTTGA ATAAAACTTC GGACAAAATC 480
GAACCCGTAA TTCAAGTTTT ACCAAATGTT ACAGTGAGAC CTCAATACAA AAACAAATAC 540
AGAAAATTAC TTCCGAAGCC TGCATCTGGC CAATCAACTC CTGTCCACAC CCCGTCAAAG 600
AATCACGTCA GGTCTCTTGC TGCAACTTTC AATCCAAGCA ATTCTTCAGC TTTCTACCAA 660
GTTCAAAAAC CTTCTCCAAG TACAAACGAC CCAGCACAAC CACACTTTAA ACCCGAGGAA 720
ATAAACAGCG CTGGTTCTCC CTTACTTCTT CCTTCTGTCC TGGGATCTTC TGGAATTCCG 780
GTGAAAATCT CTTCCAGGTC TGTTGAGATG AATACTGGAT CCTCTGGAGG TGTTTGGAAG 840
ACTCCTGGGT CTTCTAAAGA TGTTGGGAGG ACTCTTGGAT CTTCTAAAGA TGTTGGGAAG 900
ACTCTTGGAT CTTCTAAAGA TGCTGGGAAG ACTCCTGAAG ATGATAGGAA GACCGTCAGA 960
GATTCAAACA ACTCATTTAA GGAAAGGATC TGCTCGGTTC AACTCGAAGA TTGCATGAAA 1020
GTTGAATTAT CCGAGTCAGA AACAGACATT TCTTCTCAGG ATTTACAAAA TCATCCTGAA 1080
AATCGAGTTG ACGATGTTGG GAAAGATCCT GCTTTAAACA AAGCAAGACG TTTTGAACTT 1140
GATGATGAGA AACGTTGGTT GACTTCAACT CCTTCATTAG TTCAATTATT CTCCCCACAA 1200
CCTCCGTGTA ACTCATTGGG AGGGGTGGTT GAAACACCAA GTATTCATAA TGGTGTAAGT 1260
GAGAAATATA AACAGAAGAA AAGTTTGAGA GTCAAGTTAC AGGAAAAAGA TGAGACAGAT 1320
CCTCGTAATT TATTTTATAA TCTTGGGAGG AA 1353
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016