| Tag |
Content |
| WERAM ID |
WERAM-Cym-0012 |
| Ensembl Protein ID |
CMH030CT |
| Gene Name |
|
| Ensembl Information |
|
| Status |
Unreviewed |
| Classification |
| Type |
Family |
E-value |
Score |
Start |
End |
| HAT |
HAT_other |
0.4 |
30 |
|
|
|
| Organism |
Cyanidioschyzon merolae |
| Domain Profile |
HAT HAT_other
Query: 187 MWSITGSRGFQLSVYHLRETSDYCIIIGERSQSSEPLSALWGHRRWVLESHLVLLE 242
+WS + G +LS+YHL+ T + C + +S+ S+ SHL L+E
Sbjct: 4 LWSESILEGRKLSIYHLKSTLEKCPFLFGQSKKSKDFQ---------FGSHLFLVE 50
Database: Schizosaccharomyces_pombe.ASM294v2.31.pep.all.fa
Posted date: Jun 9, 2016 10:46 AM
Number of letters in database: 2,387,764
Number of sequences in database: 5146
Lambda K H
0.317 0.129 0.386
Gapped
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5146
Number of Hits to DB: 1,073,874
Number of extensions: 39314
Number of successful extensions: 85
Number of sequences better than 10.0: 2
Number of HSP's gapped: 85
Number of HSP's successfully gapped: 2
Length of query: 254
Length of database: 2,387,764
Length adjustment: 86
Effective length of query: 168
Effective length of database: 1,945,208
Effective search space: 326794944
Effective search space used: 326794944
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 53 (25.0 bits)
|
Protein Sequence
(Fasta) | MTSRLLRTCF PCLAVERDFG TENRGGLPAN LEALSNDTPQ APQQEPANEL PGETKAHCTG 60
LSVSQVSAES RDAIADAPKT SSEASSEGKH DISSIFASWI DETFRNRNVR RALLLRKSDS 120
KVLASYCAAT DSGENNVSDM IGPLFLASAA YAADTIFDVL SAPRHRFARY TSRDDDCMNL 180
NHFGHRMWSI TGSRGFQLSV YHLRETSDYC IIIGERSQSS EPLSALWGHR RWVLESHLVL 240
LERAIKASMS RCAL 254Protein Fasta Sequence
>CMH030CT|HAT_other|Cyanidioschyzon merolae
MTSRLLRTCFPCLAVERDFGTENRGGLPANLEALSNDTPQAPQQEPANELPGETKAHCTGLSVSQVSAESRDAIADAPKTSSEASSEGKHDISSIFASWIDETFRNRNVRRALLLRKSDSKVLASYCAATDSGENNVSDMIGPLFLASAAYAADTIFDVLSAPRHRFARYTSRDDDCMNLNHFGHRMWSITGSRGFQLSVYHLRETSDYCIIIGERSQSSEPLSALWGHRRWVLESHLVLLERAIKASMSRCAL |
Nucleotide Sequence
(Fasta) | ATGACTTCGC GGTTACTCAG GACCTGTTTT CCCTGCTTGG CCGTTGAAAG GGACTTTGGG 60
ACTGAGAACC GTGGTGGACT ACCAGCAAAT CTCGAAGCAC TAAGTAACGA CACACCTCAG 120
GCACCGCAGC AGGAGCCGGC GAACGAGCTG CCGGGCGAAA CGAAAGCGCA CTGCACCGGT 180
CTGTCAGTTT CGCAAGTCTC CGCTGAAAGT AGGGACGCGA TCGCAGACGC GCCGAAAACT 240
TCGTCAGAGG CCTCATCGGA GGGGAAGCAC GATATTAGCT CAATTTTCGC GAGCTGGATA 300
GACGAGACGT TTCGTAACCG AAACGTTAGA CGGGCGCTCC TCCTGCGAAA GAGCGATTCC 360
AAAGTATTGG CTAGCTATTG CGCTGCAACG GACAGCGGTG AAAATAACGT AAGTGATATG 420
ATAGGGCCCC TCTTTCTCGC ATCTGCAGCG TATGCTGCGG ATACAATTTT CGATGTTCTG 480
AGCGCTCCCC GGCACCGTTT CGCACGATAC ACGTCACGAG ATGATGATTG CATGAATTTG 540
AATCATTTCG GACATAGGAT GTGGAGCATC ACTGGTTCAC GCGGCTTCCA ACTATCGGTT 600
TATCACCTGA GGGAAACCTC AGATTACTGC ATCATCATAG GCGAACGCAG TCAATCATCC 660
GAGCCATTGT CGGCGCTGTG GGGGCACAGA CGGTGGGTAC TAGAGTCGCA CTTGGTTCTT 720
CTCGAGCGCG CGATCAAAGC AAGCATGTCT AGATGTGCGC TATAAG
767Nucleotide Fasta Sequence
>CMH030CT|HAT_other|Cyanidioschyzon merolae
ATGACTTCGCGGTTACTCAGGACCTGTTTTCCCTGCTTGGCCGTTGAAAGGGACTTTGGGACTGAGAACCGTGGTGGACTACCAGCAAATCTCGAAGCACTAAGTAACGACACACCTCAGGCACCGCAGCAGGAGCCGGCGAACGAGCTGCCGGGCGAAACGAAAGCGCACTGCACCGGTCTGTCAGTTTCGCAAGTCTCCGCTGAAAGTAGGGACGCGATCGCAGACGCGCCGAAAACTTCGTCAGAGGCCTCATCGGAGGGGAAGCACGATATTAGCTCAATTTTCGCGAGCTGGATAGACGAGACGTTTCGTAACCGAAACGTTAGACGGGCGCTCCTCCTGCGAAAGAGCGATTCCAAAGTATTGGCTAGCTATTGCGCTGCAACGGACAGCGGTGAAAATAACGTAAGTGATATGATAGGGCCCCTCTTTCTCGCATCTGCAGCGTATGCTGCGGATACAATTTTCGATGTTCTGAGCGCTCCCCGGCACCGTTTCGCACGATACACGTCACGAGATGATGATTGCATGAATTTGAATCATTTCGGACATAGGATGTGGAGCATCACTGGTTCACGCGGCTTCCAACTATCGGTTTATCACCTGAGGGAAACCTCAGATTACTGCATCATCATAGGCGAACGCAGTCAATCATCCGAGCCATTGTCGGCGCTGTGGGGGCACAGACGGTGGGTACTAGAGTCGCACTTGGTTCTTCTCGAGCGCGCGATCAAAGCAAGCATGTCTAGATGTGCGCTATAAG
|
| Sequence Source |
Ensembl |
| Orthology |
|
| Created Date |
25-Jun-2016 |
