WERAM Information

Tag Content
WERAM ID WERAM-Brr-0155
Ensembl Protein ID Bra031604.1-P
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bra031604 Bra031604.1 Bra031604.1-P
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 5.40e-08 33.9 87 139
Organism Brassica rapa
Domain Profile
  Me_Reader PHD
        PHD.txt   3 iClvCgkddegekemvqCde..CddwfHlkCvklplsslpeg....kswyCpsCk 51 
                     C+ Cg + e ++ m+qC+   C+ w H+ Cv +p++s+ ++    + +yC+ C+
  Bra031604.1-P  87 RCV-CGSSLETDS-MIQCEDprCHVWQHVGCVIVPEKSMDANpplpETFYCEVCR 139
                    698.*77777765.*********************8888866689888******8 PP
Protein Sequence
(Fasta)		MDLEASCKDL VERVLTHLSD GQAARLWSKK NTMAREDVAK LVDDTYRKMQ VSGASDLASK 60
GQVSSDTSTL RVKGEPEDSF RQEVKVRCVC GSSLETDSMI QCEDPRCHVW QHVGCVIVPE 120
KSMDANPPLP ETFYCEVCRL TRADPFLVTV AHPLYPVRLT PTTISSDGFV PSPSERKSRN 180
WVLDRRWRSF VT 192
Nucleotide Sequence
(Fasta)		ATGGATTTGG AAGCTAGCTG TAAGGATCTT GTTGAGCGGG TCTTGACACA TCTTTCTGAC 60
GGACAAGCCG CCAGGTTGTG GTCTAAAAAG AATACAATGG CGAGGGAAGA CGTTGCAAAA 120
CTAGTGGATG ATACATACAG GAAAATGCAA GTATCTGGGG CAAGTGATTT AGCATCAAAA 180
GGACAAGTAA GTTCAGATAC TAGTACTCTG AGAGTCAAGG GGGAGCCTGA AGATTCCTTT 240
CGACAAGAAG TGAAAGTTCG ATGTGTTTGT GGAAGTTCAC TGGAGACTGA CTCAATGATA 300
CAGTGTGAGG ATCCTAGATG CCATGTTTGG CAGCATGTTG GCTGTGTAAT TGTCCCGGAA 360
AAGTCAATGG ATGCAAATCC GCCACTTCCT GAAACCTTTT ATTGTGAAGT CTGTCGACTT 420
ACCCGAGCTG ACCCGTTTTT GGTTACAGTG GCACATCCAC TTTATCCAGT GAGGTTGACT 480
CCAACTACCA TCTCATCTGA TGGTTTCGTC CCTTCTCCGT CAGAACGTAA GTCTCGTAAT 540
TGGGTTCTTG ATAGGAGGTG GCGGAGCTTC GTCACATAA
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0112 fgenesh2_kg.8__ 2005__ AT5G60410.5 Arabidopsis lyrata 72 6e-78 286
WERAM-Art-0145 AT5G60410.1 Arabidopsis thaliana 72 1e-76 282
WERAM-Met-0101 AES88651 Medicago truncatula 60 1e-59 226
WERAM-Viv-0034 VIT_06s0004g03180.t01 Vitis vinifera 60 1e-59 226
WERAM-Glm-0129 GLYMA11G15880.1 Glycine max 62 5e-58 221
WERAM-Sol-0139 Solyc11g069160.1.1 Solanum lycopersicum 58 4e-54 207
WERAM-Orp-0048 OPUNC05G02000.1 Oryza punctata 51 5e-45 177
WERAM-Orl-0083 KN539825.1_FGP005 Oryza longistaminata 51 5e-45 177
WERAM-Orgl-0049 OGLUM05G01840.1 Oryza glumaepatula 51 6e-45 177
WERAM-Orb-0050 OBART05G01770.1 Oryza barthii 52 6e-45 177
WERAM-Orr-0050 ORUFI05G01890.1 Oryza rufipogon 50 4e-44 174
WERAM-Orni-0108 ONIVA10G12200.1 Oryza nivara 50 4e-44 174
WERAM-Org-0050 ORGLA05G0017700.1 Oryza glaberrima 50 1e-43 172
WERAM-Mua-0088 GSMUA_Achr6P15530_001 Musa acuminata 49 3e-43 171
WERAM-Zem-0086 GRMZM2G155123_P01 Zea mays 52 5e-43 171
WERAM-Tra-0135 Traes_4AL_96A137452.1 Triticum aestivum 47 3e-38 154
WERAM-Tru-0038 TRIUR3_19264-P1 Triticum urartu 44 5e-37 150
WERAM-Hov-0075 MLOC_60545.2 Hordeum vulgare 45 1e-35 146
WERAM-Aet-0041 EMT28925 Aegilops tauschii 42 1e-30 130
WERAM-Php-0135 PP1S94_39V6.1 Physcomitrella patens 40 2e-27 119
WERAM-Brd-0102 BRADI4G26730.1 Brachypodium distachyon 44 4e-27 117
WERAM-Sem-0144 EFJ28610 Selaginella moellendorffii 39 4e-25 111
WERAM-Sot-0100 PGSC0003DMT400088246 Solanum tuberosum 40 1e-24 110
WERAM-Kll-0022 CAG99888 Kluyveromyces lactis 38 3e-06 48.9
WERAM-Ran-0130 ENSRNOP00000027067.4 Rattus norvegicus 42 3e-06 48.9
WERAM-Scj-0013 EEB06660 Schizosaccharomyces japonicus 35 4e-06 48.5
WERAM-Scp-0049 SPCC645.13.1:pep Schizosaccharomyces pombe 41 5e-06 48.1
WERAM-Ect-0099 ENSETEP00000011413.1 Echinops telfairi 43 6e-06 47.8
WERAM-Leo-0027 ENSLOCP00000004997.1 Lepisosteus oculatus 44 6e-06 47.8
WERAM-Pof-0189 ENSPFOP00000015911.2 Poecilia formosa 40 7e-06 47.8
WERAM-Xim-0113 ENSXMAP00000009810.1 Xiphophorus maculatus 40 8e-06 47.4
WERAM-Orla-0168 ENSORLP00000019951.1 Oryzias latipes 31 9e-06 47.4
Created Date 25-Jun-2016