WERAM Information

Tag Content
WERAM ID WERAM-Bro-0181
Ensembl Protein ID Bo9g173770.1
Gene Name
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
Bo9g173770 Bo9g173770.1 Bo9g173770.1
Status Unreviewed
Classification
Type Family E-value Score Start End
Me_Reader PHD 3.60e-08 35 69 113
Organism Brassica oleracea
Domain Profile
  Me_Reader PHD
       PHD.txt   2 tiClvCgkddegekemvqCdeCddwfHlkCvklplsslpegkswyCp 48 
                    +C  C + +e+++e++ Cd+Cd+ fH+kC+ +   ++p g  w+C 
  Bo9g173770.1  69 VTCEKC-DLGERDDELLLCDKCDKGFHMKCLRPIVVRVPVG-PWVCA 113
                   579999.66666667************************99.9***6 PP
Protein Sequence
(Fasta)		MATWKASSSS SPAASPSRRF ISYRRRTKAS PPRRPSSESP PRKMRSIADV MAKSPPVVEQ 60
EQDDGYGDVT CEKCDLGERD DELLLCDKCD KGFHMKCLRP IVVRVPVGPW VCAS 114
Nucleotide Sequence
(Fasta)		ATGGCCACGT GGAAAGCCTC CTCCTCCTCC TCCCCAGCAG CCTCTCCTTC CCGTCGTTTC 60
ATCTCCTATA GGAGAAGAAC CAAAGCTTCA CCACCGAGGC GACCCTCCTC CGAATCTCCA 120
CCGAGGAAGA TGAGATCGAT CGCCGATGTA ATGGCGAAAT CTCCGCCCGT CGTCGAGCAG 180
GAGCAAGACG ACGGCTACGG TGACGTCACC TGCGAGAAAT GCGACTTGGG AGAAAGAGAC 240
GATGAGCTTC TTCTTTGCGA CAAATGCGAT AAAGGGTTTC ACATGAAATG TCTCCGACCG 300
ATCGTGGTTC GTGTCCCTGT CGGACCGTGG GTCTGTGCAT CGTAA 346
Sequence Source Ensembl
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Art-0120 AT5G09790.2 Arabidopsis thaliana 68 1e-13 72.0
WERAM-Pot-0058 POPTR_0005s05930.1 Populus trichocarpa 61 2e-12 67.4
WERAM-Met-0073 AES72827 Medicago truncatula 58 4e-12 66.6
WERAM-Thc-0006 EOX92475 Theobroma cacao 50 2e-11 64.3
WERAM-Arl-0102 fgenesh2_kg.6__ 934__ AT5G09790.2 Arabidopsis lyrata 68 7e-11 62.4
WERAM-Glm-0061 GLYMA06G15660.1 Glycine max 58 1e-10 62.0
WERAM-Sot-0086 PGSC0003DMT400073757 Solanum tuberosum 77 1e-10 61.6
WERAM-Viv-0019 VIT_04s0044g00940.t01 Vitis vinifera 57 2e-09 58.2
WERAM-Sei-0011 Si001848m Setaria italica 49 1e-07 52.0
WERAM-Sol-0045 Solyc03g082860.2.1 Solanum lycopersicum 57 3e-07 50.1
WERAM-Zem-0084 GRMZM2G149587_P02 Zea mays 50 4e-07 50.1
WERAM-Orm-0017 OMERI01G41800.1 Oryza meridionalis 53 1e-06 48.1
WERAM-Sob-0061 Sb03g046950.1 Sorghum bicolor 55 2e-06 47.8
WERAM-Brr-0147 Bra029401.1-P Brassica rapa 56 2e-06 47.8
WERAM-Amt-0073 ERN19309 Amborella trichopoda 49 2e-06 47.8
WERAM-Orgl-0015 OGLUM01G49340.1 Oryza glumaepatula 51 4e-06 46.6
WERAM-Orb-0015 OBART01G44970.1 Oryza barthii 51 4e-06 46.6
WERAM-Orr-0015 ORUFI01G48490.1 Oryza rufipogon 54 4e-06 46.6
WERAM-Orni-0015 ONIVA01G51190.1 Oryza nivara 54 4e-06 46.6
WERAM-Org-0015 ORGLA01G0387900.1 Oryza glaberrima 54 4e-06 46.6
Created Date 25-Jun-2016