WERAM Information

Tag Content
WERAM ID WERAM-Met-0131
Ensembl Protein ID AES98495
Gene Name MTR_5g069290
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MTR_5g069290 AES98495 AES98495
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 0.57 32
Organism Medicago truncatula
Domain Profile
  HAT HAT_other
Query: 538 FDNSESQTRDVSRL-PSFIVQPQVDPSYYAQFYRPGADSDGRVSPFASAGATT 589
           + N+    RD++++   FI+   +DP+YY Q  +P   S  ++SP   + A+T
Sbjct: 93  YCNTRVSVRDITKIILEFILS--IDPNYYLQKVKPAIRSYKKISPELISAAST 143
  Database: Saccharomyces_cerevisiae.R64-1-1.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:46 AM
  Number of letters in database: 3,010,216
  Number of sequences in database:  6692
  
Lambda     K      H
   0.307    0.125    0.360 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 6692
Number of Hits to DB: 5,383,924
Number of extensions: 245239
Number of successful extensions: 1215
Number of sequences better than 10.0: 88
Number of HSP's gapped: 1167
Number of HSP's successfully gapped: 104
Length of query: 868
Length of database: 3,010,216
Length adjustment: 98
Effective length of query: 770
Effective length of database: 2,354,400
Effective search space: 1812888000
Effective search space used: 1812888000
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.6 bits)
S2: 60 (27.7 bits)
Protein Sequence
(Fasta)		MSGSGFKASI PNSVKKTIQN IKEITGNHSD EDIYAMLKEC SMDPNETTQK LLLQDTFHEV 60
KRKKDRKKEI LNNREHVEPR GRPGTHGRGP RGGRGNFSPH DTTGRKASVT GKDSGALLPS 120
EKVAPHLSAS QEIVYKGKSS GTSSAPIIAN GPTNMASGTI SGVGPSPSSA GNGDIMVQSS 180
GNNNNNDVHS ASPSDKSNQV ATDASGTGPA SSSAVHFSSS DPVLVPSDNS WFPGAAGAIR 240
REVGSQHSLG ESNAVTSAKN KLTAASETGS SAVQGKIQDK SQGVAKNHGN EIPSPSTPVT 300
HGSPSVSRPS SNYNNRSQQQ VGSQKVGSNK EWKPKPTNTS NQNSGPVIVS EAPPVSAEVT 360
RQLQSVSSAL DTEEAASKLQ KKLEDFHIPQ RQHVILPNHI IVPDSEKNKF CFGSLGVNFG 420
VNTTIDVSGP DSEKSSTPLS ETSQDIEETV EEQHSSQNGV VTSEVGDYPD HPQSPSNVPV 480
NLESSEVDGS SSAIQEFNES KQDTALPPEG HQYPGMHVSP NYGFGFVPPM SGTQLTSFDN 540
SESQTRDVSR LPSFIVQPQV DPSYYAQFYR PGADSDGRVS PFASAGATTK YNSNVAVLPT 600
PNSQTPQEGG ILSNAGQTPI ATQAAGLMQS SIPVTQQPLP VYRPGVQLSH YPPNYIPYGH 660
YFSPFYVQPP AMHQYLGNGA FPQQPQASTV YPPPPAVAAP GMKYPLPPFK PGTNAANPAH 720
LVMPNTFGIY GSSPAGYNHN SATTAGNSAS NEDLGSSQFK ENNVYISGQQ SEGSAVWVAA 780
PGRDMNNLPT SSFYNLPPQG QHMTFAPTQA GHGPFTSIYH PAQAVTAATV HPLLQQSQTM 840
AGAVDMVGQG GNVYQQPQHA QMNWPSNY 868
Nucleotide Sequence
(Fasta)		GAAAAACACA ACAAACAAAC AAACAAACAC ACTCACACAC TTTGGTTTGG TTTTTGGTTT 60
TGCTCTTTCT TTCTTCTCTC TCTTTTCCCC ATTATATATA TACCTAAGAA TTGAGATTGA 120
GATAGAAGAA GAATAGATCA ATTCAAAATC CACAATTTTT TTTTTCTTTC ATGTTTCCCT 180
AACCCTATTT TTCCATTTTC ACCGATCAAT CTCTAACCCC TCTACTCCTT CTTCACAAAT 240
CCTCCTTTTC CTTCATAGCC CACAATTTTT TTTCTGTGAA AGTTTTCGAC TTTATTGTTT 300
TTGAAGATGA GTGGTAGTGG GTTTAAGGCT TCAATTCCAA ACAGTGTGAA GAAAACGATC 360
CAGAATATCA AAGAGATCAC AGGGAATCAT AGTGATGAAG ATATCTATGC AATGCTTAAA 420
GAATGTTCTA TGGATCCCAA TGAAACCACT CAGAAGCTTC TCCTTCAGGA CACATTCCAT 480
GAGGTCAAAA GAAAGAAAGA CAGAAAAAAG GAGATTCTCA ACAACAGAGA ACATGTGGAA 540
CCACGTGGGA GACCTGGCAC TCACGGACGG GGGCCTAGGG GTGGTCGGGG AAATTTTTCA 600
CCTCACGATA CTACTGGAAG AAAAGCTTCT GTGACAGGGA AAGATAGTGG AGCTCTTCTA 660
CCCTCTGAGA AAGTTGCGCC GCATTTATCA GCTTCTCAAG AGATAGTATA TAAAGGGAAA 720
AGTTCTGGAA CAAGCTCTGC ACCCATTATT GCTAATGGTC CCACAAACAT GGCTTCTGGA 780
ACTATTAGTG GTGTGGGTCC TTCCCCTTCA TCTGCTGGAA ACGGAGACAT AATGGTTCAA 840
TCTTCTGGCA ATAATAATAA CAATGATGTG CATAGTGCTT CACCTTCCGA TAAATCAAAT 900
CAAGTTGCAA CAGATGCTTC TGGAACTGGG CCGGCATCGT CATCGGCTGT TCACTTCTCT 960
TCTTCTGATC CAGTATTGGT TCCATCTGAT AATTCATGGT TTCCTGGTGC TGCTGGTGCA 1020
ATTAGGCGCG AAGTGGGAAG TCAGCACTCT CTTGGGGAAT CAAATGCTGT TACTTCAGCC 1080
AAGAACAAAT TAACTGCGGC TTCTGAGACC GGCAGCTCTG CTGTGCAAGG AAAGATTCAA 1140
GATAAATCCC AGGGAGTGGC AAAGAATCAT GGCAACGAGA TACCCTCTCC ATCAACACCA 1200
GTAACTCATG GAAGCCCTTC AGTTAGTCGC CCTTCTTCTA ATTATAATAA CCGGTCGCAA 1260
CAACAAGTTG GCTCTCAGAA AGTTGGTTCT AATAAGGAAT GGAAACCGAA GCCAACCAAT 1320
ACATCTAATC AGAATTCTGG ACCTGTTATT GTATCAGAAG CTCCTCCTGT TTCAGCTGAA 1380
GTGACTAGGC AGTTACAGTC CGTGTCAAGT GCCCTTGACA CTGAAGAAGC AGCTTCAAAA 1440
CTGCAGAAGA AGCTGGAGGA TTTTCATATT CCACAGCGTC AACATGTTAT ACTTCCAAAT 1500
CATATCATAG TACCTGATTC TGAGAAGAAC AAGTTTTGCT TTGGAAGTTT GGGAGTCAAT 1560
TTTGGAGTTA ATACAACAAT CGATGTTAGT GGCCCAGATA GTGAAAAGAG CTCCACACCA 1620
CTTTCTGAAA CATCTCAGGA TATTGAAGAA ACTGTGGAGG AGCAGCACTC GAGTCAAAAT 1680
GGTGTGGTTA CGTCTGAGGT GGGAGACTAT CCTGACCACC CACAATCACC CAGCAACGTA 1740
CCTGTGAATT TAGAATCGAG TGAGGTTGAT GGGTCATCCA GTGCTATTCA GGAGTTTAAT 1800
GAGTCTAAGC AAGACACTGC TTTGCCGCCC GAAGGTCATC AATACCCGGG CATGCATGTT 1860
TCTCCAAACT ACGGTTTTGG TTTTGTGCCC CCAATGTCGG GTACTCAGCT CACATCATTT 1920
GACAATTCTG AGTCTCAGAC ACGTGATGTT TCTCGGCTTC CAAGCTTTAT TGTCCAACCA 1980
CAAGTGGATC CTAGTTATTA TGCCCAATTT TACCGGCCAG GTGCTGATAG TGATGGTCGT 2040
GTTTCTCCTT TTGCTTCTGC TGGGGCTACC ACCAAGTACA ACAGCAATGT TGCGGTGCTG 2100
CCTACACCAA ATTCTCAAAC TCCTCAAGAG GGAGGTATTT TGTCCAACGC AGGTCAAACA 2160
CCAATTGCGA CTCAAGCAGC AGGACTAATG CAAAGCTCAA TACCTGTTAC GCAGCAGCCC 2220
CTCCCTGTCT ATCGGCCGGG GGTTCAATTA TCTCATTACC CTCCAAACTA CATTCCTTAT 2280
GGTCACTATT TTTCACCATT TTATGTCCAA CCTCCAGCAA TGCACCAATA TTTGGGTAAT 2340
GGTGCATTTC CTCAACAACC TCAGGCCAGC ACTGTATATC CACCTCCCCC AGCTGTGGCA 2400
GCCCCAGGAA TGAAATATCC TCTTCCACCA TTCAAACCTG GAACAAATGC AGCAAACCCT 2460
GCACACCTTG TTATGCCAAA CACTTTTGGA ATATATGGTT CCTCTCCAGC TGGTTATAAT 2520
CATAACTCTG CAACAACTGC CGGGAATTCA GCCTCTAACG AGGATCTTGG TTCTTCTCAA 2580
TTCAAGGAAA ATAATGTATA CATCAGTGGA CAGCAGAGCG AAGGTTCAGC AGTGTGGGTG 2640
GCTGCACCTG GCCGAGACAT GAATAACTTG CCCACCAGTT CATTCTACAA CCTTCCACCT 2700
CAAGGTCAGC ACATGACTTT CGCCCCAACT CAGGCTGGCC ACGGCCCTTT TACAAGCATC 2760
TATCACCCTG CACAAGCAGT GACAGCTGCA ACAGTCCATC CGCTGTTACA GCAATCTCAG 2820
ACAATGGCAG GAGCAGTTGA TATGGTAGGA CAAGGTGGAA ATGTTTATCA GCAACCTCAA 2880
CATGCACAGA TGAATTGGCC AAGCAATTAC TAGGCTGCTT ATATTAGATA ATCGAGTCTT 2940
ATTTTTTGGG AAATCCAAAA TATAGTTGGA TTTCCATGAT GAAAGATGTG GCGATTGGCT 3000
ACGTTTTGAG TGTAAAAAGT TGGAAAATTT GCCATTATAA TCTTCTGATT GCTTGGGGAG 3060
GACACATGTA ACCGATATTG ACAATTGAAG TTAGACAAGG TAGAAACATA TGCAGGCCTT 3120
TTCTTTTGTT TTTTTTATTC CTGCTATTTT GTGTTTTTTT TTTAGCATTA ATACCTTTTC 3180
ATACCTTTTT TTTAGCATCC ATTCCACATT TCTCGTCATG GCTTACAGGT TAAAACATGG 3240
GAACACTTGT GATGTTGACT CTAATTGTCG ATCCCTGGAA TTTCATTTGT TTCTTGGGTT 3300
TTTTTATTCC AAATGTTAGT TTCTGAGAAT GTTTGATATC ATGTTATGAG ATTGAATTCT 3360
TAGTTGGAAG TTACATTTCA ATTTCATCCT TTAGCCATTG TTTTCATTGT ATCATTAATG 3420
TACTAGGATC TACAATTTAT TTTATTTTTT 3451
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016