WERAM Information

Tag Content
WERAM ID WERAM-Met-0032
Ensembl Protein ID AES62551
Gene Name MTR_1g101330
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
MTR_1g101330 AES62551 AES62551
Status Unreviewed
Classification
Type Family E-value Score Start End
HAT HAT_other 7.9 26
Organism Medicago truncatula
Domain Profile
  HAT HAT_other
Query: 244 HWMQENSISQTKNASSKNRHPDEHKSDKILEV 275
           HW++ N+I+  K      R PD+ K   + E+
Sbjct: 197 HWIESNAITTGKAVEELPRFPDDPKCRYLCEL 228
  Database: Schizosaccharomyces_pombe.ASM294v2.31.pep.all.fa
    Posted date:  Jun 9, 2016 10:46 AM
  Number of letters in database: 2,387,764
  Number of sequences in database:  5146
  
Lambda     K      H
   0.312    0.125    0.367 
Gapped
Lambda     K      H
   0.267   0.0410    0.140 
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 5146
Number of Hits to DB: 1,664,572
Number of extensions: 59759
Number of successful extensions: 171
Number of sequences better than 10.0: 8
Number of HSP's gapped: 171
Number of HSP's successfully gapped: 8
Length of query: 441
Length of database: 2,387,764
Length adjustment: 91
Effective length of query: 350
Effective length of database: 1,919,478
Effective search space: 671817300
Effective search space used: 671817300
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 56 (26.2 bits)
Protein Sequence
(Fasta)		MGFLRRLFGA KKPIPPSDGS GKKSDKDNKR RWSFGKQSSK TKSLPQPPPS AFNQFDSSTP 60
LERNKHAIAV AAATAAVAEA ALAAAHAAAE VVRLTSSGVA GSSNKTRGQL RLPEETAAVK 120
IQSAFRGYLA RRALRALKAL VKLQALVRGH IVRKKTADML RRMQTLVRLQ TKARASRAHL 180
SSDNLHSFKS SLSHYPVPEE YEQPHHVYST KFGGSSILKR CSSNSNFRKI ESEKPRFGSN 240
WLDHWMQENS ISQTKNASSK NRHPDEHKSD KILEVDTWKP QLNKNENNVN SMSNESPSKH 300
STKAQNQSLS VKFHKAKEEV AASRTADNSP QTFSASSRNG SGVRRNTPFT PTRSECSWSF 360
LGGYSGYPNY MANTESSRAK VRSQSAPRQR HEFEEYSSTR RPFQGLWDVG STNSDNDSDS 420
RSNKVSPALS RFNRIGSSNL R 441
Nucleotide Sequence
(Fasta)		CTCGTTTTCA TCCACAGTTG TAAAGATTTT GGAAGAAGAA CCTTGTATTT GCGCGTGGGG 60
TTGAAACATT GGACTATAAA AAACAGAGTT CCATGACCAA TTCTAGTCTC CGACACTCTC 120
TACAACTATA GTAGAAGAAT CCAAGTGTTC CCACTTCTTC TTCAACTACT TTCTCATTCA 180
CACTTCTTCA CCTTAACTAA ATTCATTTAA ATTCCCTTCT CTCTCACTCA ACAAATTCTT 240
AAACCTTTCC TTCAAAAGTC AAAGAAAAAA CCAATCACCG CTAATGAGTT GAACATGGGT 300
TTTCTCCGGC GACTCTTTGG CGCCAAAAAA CCGATCCCTC CCTCTGACGG GTCGGGTAAA 360
AAATCTGATA AAGACAACAA GAGAAGATGG AGCTTTGGCA AACAAAGCAG TAAAACAAAG 420
TCACTCCCAC AACCGCCACC CTCCGCCTTC AACCAATTTG ATTCCTCCAC TCCCTTAGAA 480
CGCAACAAAC ATGCAATCGC CGTTGCTGCG GCAACAGCAG CAGTCGCGGA GGCAGCTCTG 540
GCCGCTGCAC ATGCTGCGGC GGAGGTGGTC AGACTCACAA GCAGCGGCGT GGCGGGAAGT 600
AGTAACAAAA CGCGTGGTCA GTTACGGTTG CCGGAGGAGA CCGCCGCCGT TAAAATACAG 660
TCGGCTTTTC GTGGCTATTT GGCAAGGAGA GCGTTGAGAG CACTTAAAGC ATTGGTGAAG 720
TTGCAAGCAC TGGTTCGAGG CCACATTGTG AGAAAGAAAA CTGCAGATAT GCTCAGGCGT 780
ATGCAAACAT TGGTGCGACT ACAGACAAAG GCACGTGCAA GTCGTGCGCA CTTGTCATCA 840
GATAATCTGC ATTCTTTTAA GTCTTCACTT TCTCATTACC CTGTCCCTGA AGAATATGAG 900
CAACCACATC ATGTCTATAG TACAAAATTC GGTGGATCTT CCATCCTCAA GAGGTGCAGT 960
TCCAATTCAA ATTTTAGGAA GATTGAGTCG GAGAAACCAC GGTTTGGCTC CAATTGGTTA 1020
GACCATTGGA TGCAAGAGAA CTCCATTAGC CAAACAAAAA ACGCATCATC GAAGAATAGA 1080
CACCCTGATG AACATAAAAG TGATAAGATT CTCGAAGTAG ATACTTGGAA GCCACAGTTG 1140
AATAAAAATG AGAATAATGT GAATTCTATG TCAAATGAAT CTCCATCAAA ACATTCAACA 1200
AAAGCTCAAA ATCAAAGTCT CTCAGTGAAG TTTCACAAAG CAAAAGAAGA AGTAGCAGCA 1260
TCGCGCACTG CTGATAATAG TCCACAAACA TTTTCTGCTT CTTCAAGAAA TGGAAGTGGT 1320
GTAAGAAGAA ATACCCCCTT TACACCTACA AGAAGTGAGT GTTCATGGAG TTTCTTAGGT 1380
GGTTACTCTG GTTACCCTAA TTACATGGCA AACACTGAAT CTTCTAGAGC TAAGGTTAGA 1440
TCACAAAGTG CACCAAGACA AAGGCATGAG TTTGAGGAAT ACAGTTCTAC TAGAAGGCCT 1500
TTTCAAGGTC TTTGGGATGT AGGGTCTACT AATTCAGACA ATGATTCTGA TTCAAGGAGC 1560
AACAAAGTCT CACCTGCTTT GAGTCGTTTT AATAGAATTG GAAGTAGCAA TTTAAGGTGA 1620
CACATTGCTT GTCTTATGCT TGTGTATGAA GACATTTTAA TTACCACTTT TTCCACAAAA 1680
TAGAAAAAAG AAACATGTTT CCATTTTTTT TTTTATTTTT TTGGTGTGTG GCAGCTTTTT 1740
AAAATGTAAT TACTAGTAGT AACATTTTGA CCTGTACTTT TGTAGTGTAT TCTATTATCT 1800
ATTGTTCACA CGATCAAAAG TTACTTTGTT GACTTGATGT TACAAGTATG ATGATTTGTA 1860
AATCATGAAT TGGTTTGACT ATTTTGC 1888
Sequence Source Ensembl
Orthology
Created Date 25-Jun-2016