WERAM Information

Tag Content
WERAM ID WERAM-Art-0048
Ensembl Protein ID AT2G30470.1
Uniprot Accession Q8W4L5; VAL1_ARATH; O04346
Genbank Protein ID NP_850146.1
Protein Name B3 domain-containing transcription repressor VAL1
Genbank Nucleotide ID NM_179815.2
Gene Name VAL1,HSI2,At2g30470,T6B20.17
Ensembl Information
Ensembl Gene ID Ensembl Transcript ID Ensembl Protein ID
AT2G30470 AT2G30470.1 AT2G30470.1
Details
Type Family Domain Substrates AA References (PMIDs)
Me_Reader ZF-CW CW-type H3Kme2/3 K 21522130
Status Reviewed
Classification
Type Family E-value Score Start End
Me_Reader ZF-CW 1.10e-17 64.6 58 587
Organism Arabidopsis thaliana
NCBI Taxa ID 3702
Functional Description
(View)		 Transcriptional repressor of gene expression involved in embryonic pathways, such as LEC1, ABI3, and FUS3. Repressor of the sugar-inducible genes involved in the seed maturation program in seedlings. Plays an essential role in regulating the transition from seed maturation to seedling growth. Functionally redundant with VAL2/HSL1.
Domain Profile
  Me_Reader ZF-CW
    ZF-CW.txt  3 eekvWvqCddClKWRr 18
                  ++ W +C  C+K R 
  AT2G30470.1 58 DQSGWRECYLCSK-RL 72
                 5778999*99999.54 PP
    ZF-CW.txt   2 geekvWvqCddClKWRrLpgevdasvlsekWiCinNs.dvrynnCsvpeEsl 52 
                  ge+++W++CddC+KWRrLp  vda  ls+kW+Ci+N+ dv++++Cs+peEsl
  AT2G30470.1 539 GEQERWATCDDCSKWRRLP--VDAL-LSFKWTCIDNVwDVSRCSCSAPEESL 587
                  689****************..9996.************************97 PP
Protein Sequence
(Fasta)		MFEVKMGSKM CMNASCGTTS TVEWKKGWPL RSGLLADLCY RCGSAYESSL FCEQFHKDQS 60
GWRECYLCSK RLHCGCIASK VTIELMDYGG VGCSTCACCH QLNLNTRGEN PGVFSRLPMK 120
TLADRQHVNG ESGGRNEGDL FSQPLVMGGD KREEFMPHRG FGKLMSPEST TTGHRLDAAG 180
EMHESSPLQP SLNMGLAVNP FSPSFATEAV EGMKHISPSQ SNMVHCSASN ILQKPSRPAI 240
STPPVASKSA QARIGRPPVE GRGRGHLLPR YWPKYTDKEV QQISGNLNLN IVPLFEKTLS 300
ASDAGRIGRL VLPKACAEAY FPPISQSEGI PLKIQDVRGR EWTFQFRYWP NNNSRMYVLE 360
GVTPCIQSMM LQAGDTVTFS RVDPGGKLIM GSRKAANAGD MQGCGLTNGT STEDTSSSGV 420
TENPPSINGS SCISLIPKEL NGMPENLNSE TNGGRIGDDP TRVKEKKRTR TIGAKNKRLL 480
LHSEESMELR LTWEEAQDLL RPSPSVKPTI VVIEEQEIEE YDEPPVFGKR TIVTTKPSGE 540
QERWATCDDC SKWRRLPVDA LLSFKWTCID NVWDVSRCSC SAPEESLKEL ENVLKVGREH 600
KKRRTGESQA AKSQQEPCGL DALASAAVLG DTIGEPEVAT TTRHPRHRAG CSCIVCIQPP 660
SGKGRHKPTC GCTVCSTVKR RFKTLMMRRK KKQLERDVTA AEDKKKKDME LAESDKSKEE 720
KEVNTARIDL NSDPYNKEDV EAVAVEKEES RKRAIGQCSG VVAQDASDVL GVTELEGEGK 780
NVREEPRVSS
Nucleotide Sequence
(Fasta)		AAATTGAAAC AAAAAAAAAA ATTCACCCAA AAAAAAAAAA CCTCGTTGCC TTCTTCTTCG 60
CCGTTACAGT CCTCTTTCTT TCTTCAATTC GCCGTCAAAA TCTTCTCTTT CTCTTCCCCC 120
GCCGGTCCTT CACCAATCCT CTGATCTCTC TACACACGAA CCTTTGATTT TGACCAACGT 180
CGATGCATGT TCATGACTAG TCTCTTCCTC AATCCTTCAA TTTCATCAAT TCACGTCGAT 240
TTCGTATCCG ATTCGTTGTT CTAGCTCTTT GTGTGGTGTT AGGGTTTTAA GATTTTGGAA 300
TTGGGGTTTG GAGTTTGTGA TGTTTGAAGT CAAAATGGGG TCAAAGATGT GCATGAACGC 360
TTCATGTGGT ACGACTTCTA CTGTTGAATG GAAGAAAGGT TGGCCTCTTC GATCTGGTCT 420
TCTCGCTGAT CTCTGTTATC GTTGCGGATC TGCGTATGAG AGTTCTCTAT TCTGTGAACA 480
ATTTCATAAG GACCAATCTG GTTGGAGGGA ATGCTATTTG TGTAGCAAGA GACTACATTG 540
TGGATGCATT GCTTCTAAGG TAACGATTGA GTTAATGGAC TATGGTGGTG TTGGTTGTAG 600
TACATGTGCT TGCTGCCATC AACTCAATTT GAACACAAGG GGTGAGAATC CAGGTGTTTT 660
TAGCAGATTG CCAATGAAAA CGTTAGCTGA TAGGCAACAT GTAAATGGCG AAAGCGGAGG 720
AAGAAACGAA GGCGATCTCT TTTCTCAGCC ACTAGTCATG GGCGGAGATA AAAGGGAAGA 780
GTTCATGCCT CACCGTGGGT TTGGTAAGCT AATGAGTCCA GAAAGTACAA CCACCGGGCA 840
TAGGCTGGAT GCTGCTGGGG AAATGCATGA ATCATCACCT TTACAGCCAT CTTTAAATAT 900
GGGTTTGGCT GTGAATCCGT TTAGCCCATC TTTTGCAACC GAGGCTGTCG AGGGAATGAA 960
ACACATCAGT CCTTCTCAGT CCAACATGGT CCATTGCTCT GCTTCTAATA TACTGCAAAA 1020
GCCATCAAGA CCTGCTATTT CAACTCCTCC TGTGGCTAGT AAATCCGCTC AGGCGCGGAT 1080
TGGAAGGCCT CCTGTCGAAG GGCGAGGGAG AGGCCACTTG CTTCCGCGGT ATTGGCCAAA 1140
ATATACGGAT AAAGAGGTTC AGCAGATCTC TGGAAATTTG AATTTGAACA TTGTACCTCT 1200
CTTTGAGAAA ACTCTTAGTG CCAGTGATGC TGGTCGCATT GGTCGTCTAG TTCTTCCAAA 1260
AGCCTGTGCA GAGGCATATT TTCCTCCGAT TAGTCAATCC GAAGGCATTC CTTTGAAAAT 1320
CCAAGATGTG AGGGGTAGGG AGTGGACGTT CCAGTTCAGA TATTGGCCCA ATAACAATAG 1380
TAGAATGTAT GTTTTAGAAG GTGTCACTCC ATGCATACAG TCCATGATGC TACAGGCTGG 1440
TGATACAGTA ACTTTCAGTC GGGTTGATCC TGGCGGAAAA CTAATCATGG GTTCCAGGAA 1500
GGCAGCTAAT GCTGGAGACA TGCAGGGTTG TGGGCTCACC AACGGAACAT CAACTGAGGA 1560
CACATCATCG TCTGGTGTAA CAGAAAACCC ACCCTCCATA AATGGTTCCT CGTGTATTTC 1620
ACTAATACCG AAAGAGTTGA ATGGTATGCC TGAGAATTTG AACAGTGAGA CTAACGGGGG 1680
CAGGATAGGT GATGATCCTA CACGAGTTAA AGAGAAGAAG AGAACTCGAA CCATTGGTGC 1740
AAAAAATAAG AGACTTCTTT TGCATAGTGA AGAATCTATG GAGCTGAGAC TCACTTGGGA 1800
AGAAGCTCAG GACTTGCTTC GTCCCTCTCC TAGTGTAAAG CCTACCATCG TTGTCATTGA 1860
GGAGCAAGAA ATTGAAGAAT ATGACGAACC TCCTGTCTTT GGAAAGAGGA CTATAGTCAC 1920
TACAAAACCT TCAGGTGAAC AGGAACGATG GGCAACTTGC GACGACTGCT CTAAATGGAG 1980
AAGGTTACCT GTAGATGCTC TTCTTTCCTT TAAATGGACA TGTATAGACA ATGTTTGGGA 2040
TGTGAGTAGG TGTTCATGTT CTGCACCGGA GGAGAGTCTG AAGGAACTTG AGAATGTTCT 2100
TAAAGTAGGA AGAGAGCACA AGAAGAGAAG AACTGGGGAA AGCCAGGCAG CAAAAAGTCA 2160
GCAAGAACCG TGTGGTTTGG ACGCACTGGC GAGTGCAGCA GTCTTAGGAG ACACAATAGG 2220
CGAGCCAGAG GTAGCGACCA CGACCAGACA TCCAAGGCAC AGGGCTGGAT GCTCTTGCAT 2280
CGTGTGCATT CAGCCACCAA GTGGGAAAGG TAGGCACAAG CCTACATGTG GCTGCACTGT 2340
GTGTAGCACC GTGAAGAGAA GGTTCAAGAC GCTTATGATG AGGAGGAAGA AGAAGCAGTT 2400
GGAGCGCGAT GTAACAGCAG CAGAAGATAA GAAGAAGAAG GACATGGAAC TGGCTGAGTC 2460
TGATAAGAGT AAGGAGGAGA AGGAAGTGAA CACAGCGAGA ATAGACCTGA ACAGTGATCC 2520
ATACAATAAA GAAGATGTTG AAGCTGTTGC GGTGGAGAAA GAAGAGAGTC GAAAAAGAGC 2580
AATAGGACAG TGTTCGGGCG TGGTGGCTCA AGACGCCAGT GATGTTTTAG GAGTTACAGA 2640
GTTAGAAGGA GAGGGTAAGA ATGTTCGTGA AGAGCCGAGA GTTTCAAGCT GATATGGAAG 2700
GAAAAAGGGA AAGGGTAAAA GCCAAAGTCA TAGCCAGTTT TATTAATATG CTGAGACCAA 2760
GAGTAGGAGA AGAAGAAGAG AAAGAGAGAG AGAGAGAGAG AGAGAGAAGT ACAGTTTTGT 2820
GTTTGATTCT GTCATAGTTG TAGGAAAAAT AAGTTTCTGG TTCTAAACAG CGACAATGTC 2880
CCATCTTTTG TTTTTTGTTT TTGTTTTTGT ATTTTTATGG TATCGTGTTG AGTTTGGGGT 2940
TTATAGTATG TCTCCATTAA TCTAGGTTTT GTTGTAGAAG GCAAATGGAG CTTTGTGCTT 3000
GGTGATGAAA CAGTTGAGTT GATTTTTTTT TTTGTAATTG TTTTCAACCA AATGCCTAGT 3060
TGGTTTAATT TTTTTAAAAG TTGTTTCTT
Sequence Source Ensembl
Keyword

KW-0175--Coiled coil
KW-0181--Complete proteome
KW-0238--DNA-binding
KW-0479--Metal-binding
KW-0539--Nucleus
KW-1185--Reference proteome
KW-0678--Repressor
KW-0804--Transcription
KW-0805--Transcription regulation
KW-0862--Zinc
KW-0863--Zinc-finger
--
Interpro

IPR003340--B3_DNA-bd
IPR015300--DNA-bd_pseudobarrel
IPR011124--Znf_CW
PROSITE

PS50863--B3
PS51050--ZF_CW
Pfam

PF02362--B3
PF07496--zf-CW
Gene Ontology

GO:0005739--C:mitochondrion
GO:0005634--C:nucleus
GO:0003677--F:DNA binding
GO:0003700--F:transcription factor activity, sequence-specific DNA binding
GO:0008270--F:zinc ion binding
GO:0045892--P:negative regulation of transcription, DNA-templated
GO:0009737--P:response to abscisic acid
GO:0009744--P:response to sucrose
GO:0006351--P:transcription, DNA-templated
Orthology
WERAM ID Ensembl Protein ID Species Identity E-value Score
WERAM-Arl-0126 scaffold_401535.1 Arabidopsis lyrata 94 0.0 1475
Created Date 25-Jun-2016