Tag |
Content |
WERAM ID |
WERAM-Art-0026 |
Ensembl Protein ID |
AT1G69770.1 |
Uniprot Accession |
Q94F88; CMT3_ARATH; Q94FN4; Q9C9L8 |
Genbank Protein ID |
NP_177135.1 |
Protein Name |
DNA (cytosine-5)-methyltransferase CMT3 |
Genbank Nucleotide ID |
NM_105645.3 |
Gene Name |
CMT3,At1g69770,T6C23.3 |
Ensembl Information |
|
Details |
Type |
Family |
Domain |
Substrates |
AA |
References (PMIDs) |
Me_Reader |
BAH |
BAH |
H3K9me2 |
K |
23021223 |
Me_Reader |
Chromodomain |
Chromo |
H3K9me2 |
K |
23021223 |
|
Status |
Reviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
Me_Reader |
BAH |
8.00e-39 |
133.5 |
109 |
227 |
Me_Reader |
Chromodomain |
9.70e-18 |
64.8 |
382 |
443 |
|
Organism |
Arabidopsis thaliana |
NCBI Taxa ID |
3702 |
Functional Description (View)Functional Description
Involved in the CpXpG methylation and in gene silencing. Methylates preferentially transposon-related sequences. Functionally redundant to DRM1/DRM2 to maintain non-CpG methylation. Involved in RNA-directed DNA methylation. |
Involved in the CpXpG methylation and in gene silencing. Methylates preferentially transposon-related sequences. Functionally redundant to DRM1/DRM2 to maintain non-CpG methylation. Involved in RNA-directed DNA methylation.
|
Domain Profile |
Me_Reader BAH
BAH.txt 2 llkkgdsvllqdderktpdvyiikiieLfeneneveikkfarvrwffRpseikesksrllykkkfanevfkselydtdseinleevigvvqvlplaey 99 +++++d++++q++e+k+p +i+kiie+fe++n+ k+++++rwf+Rps+++++++++l+kk ++vf+se++dt +e++l e++++++++pl+e+ AT1G69770.1 109 IYELNDDAYVQSGEGKDP--FICKIIEMFEGANG---KLYFTARWFYRPSDTVMKEFEILIKK---KRVFFSEIQDT-NELGLLEKKLNILMIPLNEN 197 799***************..**************...*************************9...***********.******************** PP BAH.txt 100 nkesipktekeddvflvdlslekkaekflkie 131 +ke+ip+te++d f++d++++ ++++f++i+ AT1G69770.1 198 TKETIPATENCD--FFCDMNYFLPYDTFEAIQ 227 ************..***************996 PP
Me_Reader Chromodomain
Chromodomain.txt 1 Feverivd......kkelrkgeveYlVrWkGynksddtWepeenLl.ckelleefekkkekkk 56 F+v++iv+ kk l++g + ++VrW++y++s+dtWep+e L+ c+ ++eef+k +k+ AT1G69770.1 382 FTVDKIVGisfgvpKKLLKRGLY-LKVRWLNYDDSHDTWEPIEGLSnCRGKIEEFVKLGYKSG 443 99*********************.**********************************99986 PP
|
Protein Sequence (Fasta) | MAPKRKRPAT KDDTTKSIPK PKKRAPKRAK TVKEEPVTVV EEGEKHVARF LDEPIPESEA 60 KSTWPDRYKP IEVQPPKASS RKKTKDDEKV EIIRARCHYR RAIVDERQIY ELNDDAYVQS 120 GEGKDPFICK IIEMFEGANG KLYFTARWFY RPSDTVMKEF EILIKKKRVF FSEIQDTNEL 180 GLLEKKLNIL MIPLNENTKE TIPATENCDF FCDMNYFLPY DTFEAIQQET MMAISESSTI 240 SSDTDIREGA AAISEIGECS QETEGHKKAT LLDLYSGCGA MSTGLCMGAQ LSGLNLVTKW 300 AVDMNAHACK SLQHNHPETN VRNMTAEDFL FLLKEWEKLC IHFSLRNSPN SEEYANLHGL 360 NNVEDNEDVS EESENEDDGE VFTVDKIVGI SFGVPKKLLK RGLYLKVRWL NYDDSHDTWE 420 PIEGLSNCRG KIEEFVKLGY KSGILPLPGG VDVVCGGPPC QGISGHNRFR NLLDPLEDQK 480 NKQLLVYMNI VEYLKPKFVL MENVVDMLKM AKGYLARFAV GRLLQMNYQV RNGMMAAGAY 540 GLAQFRLRFF LWGALPSEII PQFPLPTHDL VHRGNIVKEF QGNIVAYDEG HTVKLADKLL 600 LKDVISDLPA VANSEKRDEI TYDKDPTTPF QKFIRLRKDE ASGSQSKSKS KKHVLYDHHP 660 LNLNINDYER VCQVPKRKGA NFRDFPGVIV GPGNVVKLEE GKERVKLESG KTLVPDYALT 720 YVDGKSCKPF GRLWWDEIVP TVVTRAEPHN QVIIHPEQNR VLSIRENARL QGFPDDYKLF 780 GPPKQKYIQV GNAVAVPVAK ALGYALGTAF QGLAVGKDPL LTLPEGFAFM KPTLPSELA 839Protein Fasta Sequence
>AT1G69770.1|CMT3,At1g69770,T6C23.3|Arabidopsis thaliana MAPKRKRPATKDDTTKSIPKPKKRAPKRAKTVKEEPVTVVEEGEKHVARFLDEPIPESEAKSTWPDRYKPIEVQPPKASSRKKTKDDEKVEIIRARCHYRRAIVDERQIYELNDDAYVQSGEGKDPFICKIIEMFEGANGKLYFTARWFYRPSDTVMKEFEILIKKKRVFFSEIQDTNELGLLEKKLNILMIPLNENTKETIPATENCDFFCDMNYFLPYDTFEAIQQETMMAISESSTISSDTDIREGAAAISEIGECSQETEGHKKATLLDLYSGCGAMSTGLCMGAQLSGLNLVTKWAVDMNAHACKSLQHNHPETNVRNMTAEDFLFLLKEWEKLCIHFSLRNSPNSEEYANLHGLNNVEDNEDVSEESENEDDGEVFTVDKIVGISFGVPKKLLKRGLYLKVRWLNYDDSHDTWEPIEGLSNCRGKIEEFVKLGYKSGILPLPGGVDVVCGGPPCQGISGHNRFRNLLDPLEDQKNKQLLVYMNIVEYLKPKFVLMENVVDMLKMAKGYLARFAVGRLLQMNYQVRNGMMAAGAYGLAQFRLRFFLWGALPSEIIPQFPLPTHDLVHRGNIVKEFQGNIVAYDEGHTVKLADKLLLKDVISDLPAVANSEKRDEITYDKDPTTPFQKFIRLRKDEASGSQSKSKSKKHVLYDHHPLNLNINDYERVCQVPKRKGANFRDFPGVIVGPGNVVKLEEGKERVKLESGKTLVPDYALTYVDGKSCKPFGRLWWDEIVPTVVTRAEPHNQVIIHPEQNRVLSIRENARLQGFPDDYKLFGPPKQKYIQVGNAVAVPVAKALGYALGTAFQGLAVGKDPLLTLPEGFAFMKPTLPSELA
|
Nucleotide Sequence (Fasta) | AGGGTTTCAT TTCGTCTCTT TATCTTCCTT CGTCTCTTTA GCTTCCTTCG ATTCTCTGAC 60 TCAATCATGG CGCCGAAGCG AAAGAGACCT GCGACAAAGG ATGACACTAC CAAATCCATT 120 CCCAAACCGA AGAAGAGAGC TCCTAAGCGA GCTAAGACGG TGAAAGAAGA GCCGGTGACA 180 GTGGTCGAGG AAGGGGAAAA GCATGTTGCG AGGTTTCTAG ACGAGCCAAT TCCAGAATCT 240 GAAGCGAAGA GTACCTGGCC TGACAGATAC AAACCGATTG AGGTACAGCC ACCTAAGGCT 300 TCGTCAAGAA AGAAGACGAA GGATGACGAA AAAGTTGAGA TCATTCGTGC TCGATGCCAT 360 TATAGACGTG CGATTGTTGA TGAGCGTCAG ATATATGAGC TGAATGATGA TGCTTATGTA 420 CAGTCTGGTG AGGGAAAGGA TCCCTTCATT TGTAAAATCA TTGAAATGTT TGAAGGGGCT 480 AATGGGAAAC TGTATTTCAC GGCTCGGTGG TTTTATAGAC CTTCTGATAC TGTAATGAAA 540 GAGTTCGAGA TTCTGATCAA GAAAAAGCGT GTGTTTTTCT CTGAGATACA AGATACAAAT 600 GAATTGGGAT TACTTGAAAA GAAGCTGAAC ATTTTGATGA TTCCCTTGAA TGAAAATACT 660 AAAGAGACTA TCCCTGCAAC AGAAAACTGT GACTTTTTCT GTGACATGAA CTATTTCTTG 720 CCTTACGATA CATTTGAAGC TATACAACAA GAAACCATGA TGGCTATAAG TGAAAGTTCA 780 ACAATATCCA GTGATACTGA TATAAGAGAA GGAGCTGCTG CCATATCAGA GATTGGAGAA 840 TGTTCTCAAG AAACAGAAGG TCACAAAAAG GCAACTTTGC TTGACCTTTA CTCCGGCTGT 900 GGAGCTATGT CGACAGGGTT GTGCATGGGT GCACAACTGT CTGGTTTGAA CCTCGTCACT 960 AAATGGGCTG TTGACATGAA TGCACATGCA TGTAAAAGCT TGCAGCATAA CCACCCAGAG 1020 ACAAACGTGA GAAACATGAC CGCAGAAGAT TTCTTGTTTC TGCTTAAGGA GTGGGAGAAG 1080 CTATGCATTC ATTTCTCTTT GAGAAATAGT CCAAATTCAG AAGAATATGC CAACCTTCAC 1140 GGTTTGAATA ATGTTGAGGA CAATGAAGAT GTCAGCGAGG AGAGTGAAAA TGAAGATGAT 1200 GGAGAAGTTT TTACTGTTGA CAAGATTGTT GGTATTTCCT TCGGAGTCCC TAAAAAGTTA 1260 TTGAAACGTG GACTTTATTT GAAGGTAAGG TGGCTGAATT ATGATGATTC TCATGATACA 1320 TGGGAGCCTA TTGAAGGACT CAGTAATTGC CGGGGTAAAA TTGAAGAGTT CGTTAAACTT 1380 GGATATAAAT CTGGCATCCT TCCGTTACCA GGAGGTGTTG ATGTTGTCTG CGGTGGGCCA 1440 CCATGCCAAG GAATCAGTGG TCACAACCGC TTCAGGAACT TATTGGACCC TCTAGAAGAT 1500 CAGAAAAACA AGCAGCTTTT GGTGTATATG AACATTGTAG AATATTTGAA GCCTAAGTTC 1560 GTTTTGATGG AAAACGTCGT TGACATGCTG AAGATGGCTA AGGGCTATCT TGCACGGTTT 1620 GCTGTTGGAC GCCTTCTACA GATGAATTAC CAAGTGAGGA ATGGAATGAT GGCAGCTGGA 1680 GCTTATGGGC TTGCTCAGTT TCGTTTGAGG TTCTTTCTAT GGGGTGCACT CCCTAGTGAG 1740 ATAATTCCGC AGTTCCCACT TCCAACACAT GATCTAGTTC ATAGAGGAAA TATTGTCAAG 1800 GAGTTTCAGG GAAACATAGT AGCCTATGAT GAAGGACATA CTGTGAAGTT AGCAGACAAG 1860 CTTTTGTTGA AGGATGTGAT TTCTGATCTT CCTGCAGTTG CCAACAGTGA AAAAAGAGAC 1920 GAGATTACAT ATGACAAAGA TCCCACAACG CCATTTCAAA AGTTCATCAG ATTGAGAAAG 1980 GATGAAGCGT CAGGTTCACA ATCAAAGTCC AAGTCCAAAA AGCATGTCTT ATATGATCAT 2040 CACCCTCTTA ATCTTAATAT AAATGACTAT GAACGGGTTT GTCAGGTCCC CAAGAGAAAG 2100 GGAGCGAATT TTAGGGACTT TCCTGGTGTT ATTGTTGGAC CTGGTAATGT AGTCAAGTTG 2160 GAAGAGGGAA AGGAAAGGGT CAAACTTGAA TCTGGAAAAA CATTGGTTCC CGATTATGCC 2220 TTAACATATG TCGATGGGAA ATCATGCAAA CCTTTTGGTC GTCTTTGGTG GGACGAAATT 2280 GTCCCCACTG TTGTCACACG GGCAGAACCC CACAACCAGG TGATCATTCA TCCAGAGCAA 2340 AATCGGGTTT TATCCATTCG AGAAAATGCG AGACTCCAAG GCTTTCCTGA TGACTACAAA 2400 CTCTTTGGCC CACCCAAACA GAAGTACATT CAAGTAGGTA ACGCTGTAGC TGTGCCAGTA 2460 GCGAAGGCCC TTGGATATGC TTTGGGAACA GCTTTCCAGG GACTCGCAGT TGGGAAAGAT 2520 CCACTTCTTA CTCTGCCTGA AGGTTTTGCA TTCATGAAGC CAACTCTTCC TTCCGAGCTT 2580 GCATGAACAC TGTTGATTCA TCGCATTTTT CGATTTATCT TCTATTCATT GTTTTCCTAG 2640 GATTTATCTT TAGACCATTT GCTGCGGAAT TTGGATTTGT TTTGTTTAAG TTTCACGACT 2700 TTCAAGTTTA GCAACTCTGA ATTTCTGGTA ACTTTGTTTT AATCAGATGT TATGGATTTG 2760 TGGG
2765Nucleotide Fasta Sequence
>AT1G69770.1|Chromodomain|Arabidopsis thaliana AGGGTTTCATTTCGTCTCTTTATCTTCCTTCGTCTCTTTAGCTTCCTTCGATTCTCTGACTCAATCATGGCGCCGAAGCGAAAGAGACCTGCGACAAAGGATGACACTACCAAATCCATTCCCAAACCGAAGAAGAGAGCTCCTAAGCGAGCTAAGACGGTGAAAGAAGAGCCGGTGACAGTGGTCGAGGAAGGGGAAAAGCATGTTGCGAGGTTTCTAGACGAGCCAATTCCAGAATCTGAAGCGAAGAGTACCTGGCCTGACAGATACAAACCGATTGAGGTACAGCCACCTAAGGCTTCGTCAAGAAAGAAGACGAAGGATGACGAAAAAGTTGAGATCATTCGTGCTCGATGCCATTATAGACGTGCGATTGTTGATGAGCGTCAGATATATGAGCTGAATGATGATGCTTATGTACAGTCTGGTGAGGGAAAGGATCCCTTCATTTGTAAAATCATTGAAATGTTTGAAGGGGCTAATGGGAAACTGTATTTCACGGCTCGGTGGTTTTATAGACCTTCTGATACTGTAATGAAAGAGTTCGAGATTCTGATCAAGAAAAAGCGTGTGTTTTTCTCTGAGATACAAGATACAAATGAATTGGGATTACTTGAAAAGAAGCTGAACATTTTGATGATTCCCTTGAATGAAAATACTAAAGAGACTATCCCTGCAACAGAAAACTGTGACTTTTTCTGTGACATGAACTATTTCTTGCCTTACGATACATTTGAAGCTATACAACAAGAAACCATGATGGCTATAAGTGAAAGTTCAACAATATCCAGTGATACTGATATAAGAGAAGGAGCTGCTGCCATATCAGAGATTGGAGAATGTTCTCAAGAAACAGAAGGTCACAAAAAGGCAACTTTGCTTGACCTTTACTCCGGCTGTGGAGCTATGTCGACAGGGTTGTGCATGGGTGCACAACTGTCTGGTTTGAACCTCGTCACTAAATGGGCTGTTGACATGAATGCACATGCATGTAAAAGCTTGCAGCATAACCACCCAGAGACAAACGTGAGAAACATGACCGCAGAAGATTTCTTGTTTCTGCTTAAGGAGTGGGAGAAGCTATGCATTCATTTCTCTTTGAGAAATAGTCCAAATTCAGAAGAATATGCCAACCTTCACGGTTTGAATAATGTTGAGGACAATGAAGATGTCAGCGAGGAGAGTGAAAATGAAGATGATGGAGAAGTTTTTACTGTTGACAAGATTGTTGGTATTTCCTTCGGAGTCCCTAAAAAGTTATTGAAACGTGGACTTTATTTGAAGGTAAGGTGGCTGAATTATGATGATTCTCATGATACATGGGAGCCTATTGAAGGACTCAGTAATTGCCGGGGTAAAATTGAAGAGTTCGTTAAACTTGGATATAAATCTGGCATCCTTCCGTTACCAGGAGGTGTTGATGTTGTCTGCGGTGGGCCACCATGCCAAGGAATCAGTGGTCACAACCGCTTCAGGAACTTATTGGACCCTCTAGAAGATCAGAAAAACAAGCAGCTTTTGGTGTATATGAACATTGTAGAATATTTGAAGCCTAAGTTCGTTTTGATGGAAAACGTCGTTGACATGCTGAAGATGGCTAAGGGCTATCTTGCACGGTTTGCTGTTGGACGCCTTCTACAGATGAATTACCAAGTGAGGAATGGAATGATGGCAGCTGGAGCTTATGGGCTTGCTCAGTTTCGTTTGAGGTTCTTTCTATGGGGTGCACTCCCTAGTGAGATAATTCCGCAGTTCCCACTTCCAACACATGATCTAGTTCATAGAGGAAATATTGTCAAGGAGTTTCAGGGAAACATAGTAGCCTATGATGAAGGACATACTGTGAAGTTAGCAGACAAGCTTTTGTTGAAGGATGTGATTTCTGATCTTCCTGCAGTTGCCAACAGTGAAAAAAGAGACGAGATTACATATGACAAAGATCCCACAACGCCATTTCAAAAGTTCATCAGATTGAGAAAGGATGAAGCGTCAGGTTCACAATCAAAGTCCAAGTCCAAAAAGCATGTCTTATATGATCATCACCCTCTTAATCTTAATATAAATGACTATGAACGGGTTTGTCAGGTCCCCAAGAGAAAGGGAGCGAATTTTAGGGACTTTCCTGGTGTTATTGTTGGACCTGGTAATGTAGTCAAGTTGGAAGAGGGAAAGGAAAGGGTCAAACTTGAATCTGGAAAAACATTGGTTCCCGATTATGCCTTAACATATGTCGATGGGAAATCATGCAAACCTTTTGGTCGTCTTTGGTGGGACGAAATTGTCCCCACTGTTGTCACACGGGCAGAACCCCACAACCAGGTGATCATTCATCCAGAGCAAAATCGGGTTTTATCCATTCGAGAAAATGCGAGACTCCAAGGCTTTCCTGATGACTACAAACTCTTTGGCCCACCCAAACAGAAGTACATTCAAGTAGGTAACGCTGTAGCTGTGCCAGTAGCGAAGGCCCTTGGATATGCTTTGGGAACAGCTTTCCAGGGACTCGCAGTTGGGAAAGATCCACTTCTTACTCTGCCTGAAGGTTTTGCATTCATGAAGCCAACTCTTCCTTCCGAGCTTGCATGAACACTGTTGATTCATCGCATTTTTCGATTTATCTTCTATTCATTGTTTTCCTAGGATTTATCTTTAGACCATTTGCTGCGGAATTTGGATTTGTTTTGTTTAAGTTTCACGACTTTCAAGTTTAGCAACTCTGAATTTCTGGTAACTTTGTTTTAATCAGATGTTATGGATTTGTGGG
|
Sequence Source |
Ensembl |
Keyword |
KW-0156--Chromatin regulator KW-0181--Complete proteome KW-0238--DNA-binding KW-0489--Methyltransferase KW-0539--Nucleus KW-1185--Reference proteome KW-0949--S-adenosyl-L-methionine KW-0804--Transcription KW-0805--Transcription regulation KW-0808--Transferase --
|
Interpro |
IPR001025--BAH_dom IPR018117--C5_DNA_meth_AS IPR001525--C5_MeTfrase IPR000953--Chromo/shadow_dom IPR023780--Chromo_domain IPR016197--Chromodomain-like IPR023779--Chromodomain_CS IPR029063--SAM-dependent_MTases
|
PROSITE |
PS51038--BAH PS00094--C5_MTASE_1 PS00598--CHROMO_1 PS50013--CHROMO_2 PS51679--SAM_MT_C5
|
Pfam |
PF01426--BAH PF00385--Chromo PF00145--DNA_methylase
|
Gene Ontology |
GO:0005634--C:nucleus GO:0003682--F:chromatin binding GO:0003886--F:DNA (cytosine-5-)-methyltransferase activity GO:0003677--F:DNA binding GO:0090116--P:C-5 methylation of cytosine GO:0006342--P:chromatin silencing GO:0006306--P:DNA methylation GO:0010425--P:DNA methylation on cytosine within a CNG sequence GO:0051567--P:histone H3-K9 methylation GO:0045814--P:negative regulation of gene expression, epigenetic GO:0006351--P:transcription, DNA-templated GO:0010069--P:zygote asymmetric cytokinesis in embryo sac
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Orthology |
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Created Date |
25-Jun-2016 |