Tag |
Content |
WERAM ID |
WERAM-Arl-0148 |
Ensembl Protein ID |
scaffold_801821.1 |
Gene Name |
SDG29 |
Ensembl Information |
|
Status |
Unreviewed |
Classification |
Type |
Family |
E-value |
Score |
Start |
End |
HMT |
SET1 |
3.40e-37 |
127.9 |
247 |
1023 |
Me_Reader |
PHD |
4.50e-09 |
37 |
420 |
755 |
|
Organism |
Arabidopsis lyrata |
Domain Profile |
HMT SET1
SET1.txt 65 vvvdatkkgniarfinhscepNceak 90 +v+d+++++ ++ +sc p + + scaffold_801821.1 247 IVIDPMTQAP--ELVLRSCIPDAACV 270 6899988776..57889999988886 PP SET1.txt 3 levakskikglglvakkeiekeelviEYvGevirsevadkrekeyekkeigvylfrldedaevvvdatkkgniarfinhscepNceakvv 92 + + +s i+g+gl+a ++i+++e+v EY+Ge +r +ad re++y +++ +ylf++ e+ vvvdat+kgniar+inhsc pNc+a+++ scaffold_801821.1 909 VCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRGIIADLREARYRREGKDCYLFKISEE--VVVDATEKGNIARLINHSCMPNCYARIM 996 77889*******************************************************..**************************** PP SET1.txt 93 av.dgekkiviyakraIekgeeltydY 118 +v d e +iv++ak +++ geeltydY scaffold_801821.1 997 SVgDDESRIVLIAKTTVASGEELTYDY 1023 *956779******************** PP
Me_Reader PHD
PHD.txt 2 tiClvCgkddegeke...mvqCdeCddwfHlkCvklplsslpeg...kswyCpsCke 52 ++C +C k+ ++ +v Cd+C+ w+H C +++ ++ + + +++yCp+C++ scaffold_801821.1 420 QVCGIC-KKIWNHLDsqsWVRCDGCKVWIHSACDQISHKHFK-DlgeTDYYCPTCRT 474 68****.55555333344*******************55555.346678******97 PP PHD.txt 3 iClvCg.kddegekemvqCdeCddwfHlkCvklplsslpegkswyCpsCke 52 C vC+ +d++ ++++ C+ C+ ++H++C++ ++ + +sw+C+ C++ scaffold_801821.1 615 RCAVCRwVEDWDYNKIIICNRCQIAVHQECYGTR--NVRDFTSWVCKACET 663 7****8656666666*******************..9998789******85 PP PHD.txt 25 dwfHlkCvk 33 w+H++C scaffold_801821.1 688 LWVHVTCAW 696 599999975 PP PHD.txt 2 tiClvCgkddegekemvqCdeCddwfHlkCvklp 35 +iC++C k+ +g+ + qC +C++ +H+ C + + scaffold_801821.1 725 KICVIC-KQIHGS--CTQCCKCSTYYHAMCASRA 755 79****.666664..89*************8755 PP
|
Protein Sequence (Fasta) | MIIKRKLKTR MSSLKRCNST NEEDDRAKKK RKVNFNGGGD YYYPLNLLDE IGVGIVPGKN 60 GFSVSLCKEV EVVEVEEEIK SKRLVADTSQ RGRDRMGEVS RPPLVRTSRG RVQVLPSRFN 120 DSVIENWRKD SKSSGEEREG EIEEEACRKE KVKAKFTPRN YKYSSSALCE ERDDEDKCEE 180 IGRYGNSYEM KKHMMSSRTS LASLQEQRYV DDEPRPKKEG VYGPEDFYSG DLVWGKSGRK 240 EPFWPAIVID PMTQAPELVL RSCIPDAACV MFFGHSGTEN ERDYAWVRRG MIFPFVDYVD 300 RFQEQSELRG CNPREFQMAL EEALLADQGF TEKLMQDIHL AAGNQSFDDS VYRWIEEAAG 360 SSQYLDHVAP NQDMKKYRNP RACVGCGMIL SLKMAQKMKA LIPGDQLLCK LCSRLTKPKQ 420 VCGICKKIWN HLDSQSWVRC DGCKVWIHSA CDQISHKHFK DLGETDYYCP TCRTKFNFEL 480 SDSEKQDSKS KLGKNNAPMV LPDKVIVVCS GVEGIYFPSL HLVVCKCGSC GPERKALSEW 540 ERHTGSKAKN WRTSVKVKSS KLPLEEWMMK LAEFHANATA AKPPKRPSIK QRKQRLLSFL 600 REKYEPVNVK WTTERCAVCR WVEDWDYNKI IICNRCQIAV HQECYGTRNV RDFTSWVCKA 660 CETPEIKREC CLCPVKGGAL KPTDVETLWV HVTCAWFQPE VCFASEEKME PALGILSIPS 720 SNFVKICVIC KQIHGSCTQC CKCSTYYHAM CASRAGYRME LHCLEKNGRQ ITKMVSYCSY 780 HRAPNPDTVL IIQTPSGVFS AKSLVQNKKK TGSRLILANR EEVEESAAED TIPIDPFSSA 840 RCRLYKRTVN SKKRTKEEGI PHHKGGPRHH PSAAIQTLNA FRHVAEEPKS FSSFRERLHH 900 LQRTEMDRVC FGRSGIHGWG LFARRNIQEG EMVLEYRGEQ VRGIIADLRE ARYRREGKDC 960 YLFKISEEVV VDATEKGNIA RLINHSCMPN CYARIMSVGD DESRIVLIAK TTVASGEELT 1020 YDYLFDPDEP DEFKVPCLCK SPNCRKFMN 1049Protein Fasta Sequence
>scaffold_801821.1|PHD|Arabidopsis lyrata MIIKRKLKTRMSSLKRCNSTNEEDDRAKKKRKVNFNGGGDYYYPLNLLDEIGVGIVPGKNGFSVSLCKEVEVVEVEEEIKSKRLVADTSQRGRDRMGEVSRPPLVRTSRGRVQVLPSRFNDSVIENWRKDSKSSGEEREGEIEEEACRKEKVKAKFTPRNYKYSSSALCEERDDEDKCEEIGRYGNSYEMKKHMMSSRTSLASLQEQRYVDDEPRPKKEGVYGPEDFYSGDLVWGKSGRKEPFWPAIVIDPMTQAPELVLRSCIPDAACVMFFGHSGTENERDYAWVRRGMIFPFVDYVDRFQEQSELRGCNPREFQMALEEALLADQGFTEKLMQDIHLAAGNQSFDDSVYRWIEEAAGSSQYLDHVAPNQDMKKYRNPRACVGCGMILSLKMAQKMKALIPGDQLLCKLCSRLTKPKQVCGICKKIWNHLDSQSWVRCDGCKVWIHSACDQISHKHFKDLGETDYYCPTCRTKFNFELSDSEKQDSKSKLGKNNAPMVLPDKVIVVCSGVEGIYFPSLHLVVCKCGSCGPERKALSEWERHTGSKAKNWRTSVKVKSSKLPLEEWMMKLAEFHANATAAKPPKRPSIKQRKQRLLSFLREKYEPVNVKWTTERCAVCRWVEDWDYNKIIICNRCQIAVHQECYGTRNVRDFTSWVCKACETPEIKRECCLCPVKGGALKPTDVETLWVHVTCAWFQPEVCFASEEKMEPALGILSIPSSNFVKICVICKQIHGSCTQCCKCSTYYHAMCASRAGYRMELHCLEKNGRQITKMVSYCSYHRAPNPDTVLIIQTPSGVFSAKSLVQNKKKTGSRLILANREEVEESAAEDTIPIDPFSSARCRLYKRTVNSKKRTKEEGIPHHKGGPRHHPSAAIQTLNAFRHVAEEPKSFSSFRERLHHLQRTEMDRVCFGRSGIHGWGLFARRNIQEGEMVLEYRGEQVRGIIADLREARYRREGKDCYLFKISEEVVVDATEKGNIARLINHSCMPNCYARIMSVGDDESRIVLIAKTTVASGEELTYDYLFDPDEPDEFKVPCLCKSPNCRKFMN
|
Nucleotide Sequence (Fasta) | TTGGTAATTC GAATCAGAAG ATATGATAAT CAAACGGAAA TTGAAAACTC GAATGTCGAG 60 TTTGAAACGA TGTAACTCGA CTAATGAAGA AGATGATAGA GCTAAGAAGA AGAGAAAGGT 120 CAACTTCAAT GGTGGTGGTG ATTACTATTA TCCTCTTAAT CTTCTTGATG AGATTGGTGT 180 TGGGATAGTT CCGGGTAAGA ATGGATTCTC TGTTTCTTTG TGTAAGGAAG TTGAGGTGGT 240 GGAGGTGGAG GAGGAGATAA AGTCAAAGAG ATTAGTTGCT GATACTAGCC AACGTGGGAG 300 AGATAGGATG GGTGAGGTTT CACGGCCACC GCTTGTGAGG ACATCTAGAG GAAGAGTTCA 360 GGTGCTTCCT TCACGGTTTA ATGACTCGGT TATTGAGAAT TGGAGGAAAG ATAGTAAAAG 420 TAGTGGCGAA GAACGCGAGG GAGAGATTGA AGAAGAAGCA TGCAGGAAGG AGAAAGTCAA 480 AGCTAAATTT ACTCCTAGGA ACTATAAGTA TAGTAGTAGT GCATTGTGTG AAGAGAGAGA 540 TGATGAGGAT AAATGTGAAG AGATTGGTAG ATATGGAAAT AGCTATGAGA TGAAGAAGCA 600 TATGATGAGT TCACGGACTT CACTTGCTTC TCTTCAGGAG CAGCGTTATG TAGATGATGA 660 GCCTCGTCCT AAGAAAGAGG GTGTTTATGG GCCCGAGGAT TTTTATTCGG GTGATTTGGT 720 TTGGGGTAAA TCTGGGAGGA AAGAGCCGTT TTGGCCGGCT ATTGTTATTG ATCCAATGAC 780 GCAAGCGCCC GAGCTTGTTT TGCGTTCTTG TATACCTGAT GCAGCCTGTG TTATGTTCTT 840 TGGTCACTCT GGGACAGAGA ACGAAAGGGA TTATGCATGG GTTAGAAGAG GGATGATTTT 900 CCCATTTGTG GATTATGTAG ACAGGTTTCA AGAACAGTCT GAACTGCGTG GATGCAACCC 960 TAGGGAATTT CAGATGGCAC TTGAAGAAGC TCTTTTGGCA GACCAAGGGT TCACAGAAAA 1020 GCTGATGCAG GATATTCACT TGGCCGCAGG TAACCAGAGT TTTGATGATT CTGTCTACAG 1080 ATGGATTGAA GAAGCTGCAG GCTCGAGCCA ATATCTTGAT CACGTTGCTC CAAACCAGGA 1140 CATGAAGAAA TACAGAAATC CAAGAGCCTG TGTAGGATGT GGAATGATTC TTTCTTTAAA 1200 GATGGCACAG AAAATGAAAG CTCTGATTCC CGGAGATCAA TTATTGTGTA AACTTTGTTC 1260 AAGGCTGACA AAACCGAAAC AGGTTTGTGG GATATGCAAG AAGATATGGA ATCATTTGGA 1320 TAGTCAGAGC TGGGTGCGTT GTGATGGGTG TAAAGTCTGG ATTCACTCAG CGTGTGATCA 1380 AATATCACAT AAGCATTTTA AGGATTTGGG GGAAACAGAT TACTATTGTC CCACATGCAG 1440 AACAAAATTT AACTTTGAGT TATCAGATTC AGAAAAACAA GACTCAAAAT CCAAACTTGG 1500 TAAAAACAAT GCCCCAATGG TGCTTCCTGA TAAAGTTATT GTTGTATGCT CTGGAGTAGA 1560 AGGCATATAT TTTCCAAGCC TTCATTTAGT CGTATGTAAG TGTGGATCTT GTGGACCTGA 1620 AAGGAAAGCA CTTAGTGAAT GGGAAAGGCA TACTGGTTCA AAAGCAAAAA ATTGGAGAAC 1680 TAGTGTTAAA GTTAAAAGCT CCAAGCTGCC GCTAGAAGAA TGGATGATGA AATTAGCAGA 1740 GTTCCACGCA AATGCTACTG CAGCAAAACC TCCTAAACGA CCCTCTATAA AGCAGAGAAA 1800 GCAGAGGTTG CTTTCCTTTC TTAGAGAAAA GTATGAGCCG GTCAACGTGA AGTGGACAAC 1860 CGAGCGATGT GCAGTTTGCA GATGGGTTGA AGATTGGGAC TACAACAAGA TCATTATCTG 1920 CAACAGATGT CAAATCGCAG TTCATCAGGA ATGCTATGGG ACGAGAAACG TTCGTGATTT 1980 CACATCATGG GTCTGCAAAG CCTGCGAGAC ACCTGAGATC AAACGAGAGT GTTGCCTCTG 2040 TCCTGTAAAA GGAGGTGCAT TGAAGCCAAC TGATGTGGAG ACGCTGTGGG TTCACGTAAC 2100 ATGTGCTTGG TTTCAGCCTG AAGTATGTTT TGCAAGTGAA GAAAAAATGG AACCAGCTTT 2160 GGGGATTTTG AGTATTCCAT CAAGTAATTT TGTGAAGATT TGTGTAATAT GCAAGCAAAT 2220 ACATGGCTCA TGCACTCAGT GTTGCAAGTG CTCTACGTAT TATCATGCCA TGTGTGCTTC 2280 CCGAGCTGGG TATAGAATGG AGTTGCACTG CTTGGAGAAA AATGGTCGAC AGATAACAAA 2340 GATGGTGTCG TATTGTTCTT ATCACAGGGC TCCGAATCCA GATACTGTAT TAATAATACA 2400 AACGCCTTCA GGGGTCTTTT CTGCGAAAAG TCTTGTTCAA AATAAAAAGA AAACAGGTTC 2460 GAGGCTTATT TTAGCAAACA GAGAAGAAGT TGAAGAGTCC GCCGCAGAGG ATACCATACC 2520 AATTGACCCA TTTTCTTCTG CTCGTTGTCG ACTATATAAA AGAACGGTTA ATAGCAAGAA 2580 GAGGACTAAA GAAGAAGGTA TTCCTCACCA CAAAGGAGGA CCACGTCATC ATCCTTCAGC 2640 AGCGATCCAA ACTTTGAACG CATTCAGGCA TGTGGCAGAA GAGCCCAAAT CATTTTCCTC 2700 GTTCAGGGAA CGGCTTCACC ACTTGCAGAG GACAGAAATG GATCGGGTCT GCTTTGGTCG 2760 ATCTGGGATA CATGGATGGG GCCTTTTTGC AAGAAGAAAT ATTCAAGAAG GAGAAATGGT 2820 TCTTGAATAC CGTGGGGAAC AAGTGAGAGG AATCATTGCG GACTTAAGGG AAGCAAGATA 2880 TCGTAGGGAA GGGAAGGATT GCTACCTGTT TAAGATCAGT GAGGAAGTAG TGGTGGATGC 2940 GACAGAAAAA GGGAATATCG CTCGACTAAT AAACCATTCG TGTATGCCAA ATTGCTATGC 3000 AAGGATTATG AGTGTAGGAG ATGATGAAAG TCGGATTGTT CTGATTGCCA AGACCACTGT 3060 AGCTTCTGGC GAGGAGTTAA CATATGATTA CTTGTTTGAT CCAGATGAGC CTGACGAATT 3120 CAAGGTGCCG TGTCTATGTA AATCCCCTAA CTGCAGGAAA TTCATGAATT AGAGAAAGTT 3180 TTATGTAGCT GCTC
3195Nucleotide Fasta Sequence
>scaffold_801821.1|PHD|Arabidopsis lyrata TTGGTAATTCGAATCAGAAGATATGATAATCAAACGGAAATTGAAAACTCGAATGTCGAGTTTGAAACGATGTAACTCGACTAATGAAGAAGATGATAGAGCTAAGAAGAAGAGAAAGGTCAACTTCAATGGTGGTGGTGATTACTATTATCCTCTTAATCTTCTTGATGAGATTGGTGTTGGGATAGTTCCGGGTAAGAATGGATTCTCTGTTTCTTTGTGTAAGGAAGTTGAGGTGGTGGAGGTGGAGGAGGAGATAAAGTCAAAGAGATTAGTTGCTGATACTAGCCAACGTGGGAGAGATAGGATGGGTGAGGTTTCACGGCCACCGCTTGTGAGGACATCTAGAGGAAGAGTTCAGGTGCTTCCTTCACGGTTTAATGACTCGGTTATTGAGAATTGGAGGAAAGATAGTAAAAGTAGTGGCGAAGAACGCGAGGGAGAGATTGAAGAAGAAGCATGCAGGAAGGAGAAAGTCAAAGCTAAATTTACTCCTAGGAACTATAAGTATAGTAGTAGTGCATTGTGTGAAGAGAGAGATGATGAGGATAAATGTGAAGAGATTGGTAGATATGGAAATAGCTATGAGATGAAGAAGCATATGATGAGTTCACGGACTTCACTTGCTTCTCTTCAGGAGCAGCGTTATGTAGATGATGAGCCTCGTCCTAAGAAAGAGGGTGTTTATGGGCCCGAGGATTTTTATTCGGGTGATTTGGTTTGGGGTAAATCTGGGAGGAAAGAGCCGTTTTGGCCGGCTATTGTTATTGATCCAATGACGCAAGCGCCCGAGCTTGTTTTGCGTTCTTGTATACCTGATGCAGCCTGTGTTATGTTCTTTGGTCACTCTGGGACAGAGAACGAAAGGGATTATGCATGGGTTAGAAGAGGGATGATTTTCCCATTTGTGGATTATGTAGACAGGTTTCAAGAACAGTCTGAACTGCGTGGATGCAACCCTAGGGAATTTCAGATGGCACTTGAAGAAGCTCTTTTGGCAGACCAAGGGTTCACAGAAAAGCTGATGCAGGATATTCACTTGGCCGCAGGTAACCAGAGTTTTGATGATTCTGTCTACAGATGGATTGAAGAAGCTGCAGGCTCGAGCCAATATCTTGATCACGTTGCTCCAAACCAGGACATGAAGAAATACAGAAATCCAAGAGCCTGTGTAGGATGTGGAATGATTCTTTCTTTAAAGATGGCACAGAAAATGAAAGCTCTGATTCCCGGAGATCAATTATTGTGTAAACTTTGTTCAAGGCTGACAAAACCGAAACAGGTTTGTGGGATATGCAAGAAGATATGGAATCATTTGGATAGTCAGAGCTGGGTGCGTTGTGATGGGTGTAAAGTCTGGATTCACTCAGCGTGTGATCAAATATCACATAAGCATTTTAAGGATTTGGGGGAAACAGATTACTATTGTCCCACATGCAGAACAAAATTTAACTTTGAGTTATCAGATTCAGAAAAACAAGACTCAAAATCCAAACTTGGTAAAAACAATGCCCCAATGGTGCTTCCTGATAAAGTTATTGTTGTATGCTCTGGAGTAGAAGGCATATATTTTCCAAGCCTTCATTTAGTCGTATGTAAGTGTGGATCTTGTGGACCTGAAAGGAAAGCACTTAGTGAATGGGAAAGGCATACTGGTTCAAAAGCAAAAAATTGGAGAACTAGTGTTAAAGTTAAAAGCTCCAAGCTGCCGCTAGAAGAATGGATGATGAAATTAGCAGAGTTCCACGCAAATGCTACTGCAGCAAAACCTCCTAAACGACCCTCTATAAAGCAGAGAAAGCAGAGGTTGCTTTCCTTTCTTAGAGAAAAGTATGAGCCGGTCAACGTGAAGTGGACAACCGAGCGATGTGCAGTTTGCAGATGGGTTGAAGATTGGGACTACAACAAGATCATTATCTGCAACAGATGTCAAATCGCAGTTCATCAGGAATGCTATGGGACGAGAAACGTTCGTGATTTCACATCATGGGTCTGCAAAGCCTGCGAGACACCTGAGATCAAACGAGAGTGTTGCCTCTGTCCTGTAAAAGGAGGTGCATTGAAGCCAACTGATGTGGAGACGCTGTGGGTTCACGTAACATGTGCTTGGTTTCAGCCTGAAGTATGTTTTGCAAGTGAAGAAAAAATGGAACCAGCTTTGGGGATTTTGAGTATTCCATCAAGTAATTTTGTGAAGATTTGTGTAATATGCAAGCAAATACATGGCTCATGCACTCAGTGTTGCAAGTGCTCTACGTATTATCATGCCATGTGTGCTTCCCGAGCTGGGTATAGAATGGAGTTGCACTGCTTGGAGAAAAATGGTCGACAGATAACAAAGATGGTGTCGTATTGTTCTTATCACAGGGCTCCGAATCCAGATACTGTATTAATAATACAAACGCCTTCAGGGGTCTTTTCTGCGAAAAGTCTTGTTCAAAATAAAAAGAAAACAGGTTCGAGGCTTATTTTAGCAAACAGAGAAGAAGTTGAAGAGTCCGCCGCAGAGGATACCATACCAATTGACCCATTTTCTTCTGCTCGTTGTCGACTATATAAAAGAACGGTTAATAGCAAGAAGAGGACTAAAGAAGAAGGTATTCCTCACCACAAAGGAGGACCACGTCATCATCCTTCAGCAGCGATCCAAACTTTGAACGCATTCAGGCATGTGGCAGAAGAGCCCAAATCATTTTCCTCGTTCAGGGAACGGCTTCACCACTTGCAGAGGACAGAAATGGATCGGGTCTGCTTTGGTCGATCTGGGATACATGGATGGGGCCTTTTTGCAAGAAGAAATATTCAAGAAGGAGAAATGGTTCTTGAATACCGTGGGGAACAAGTGAGAGGAATCATTGCGGACTTAAGGGAAGCAAGATATCGTAGGGAAGGGAAGGATTGCTACCTGTTTAAGATCAGTGAGGAAGTAGTGGTGGATGCGACAGAAAAAGGGAATATCGCTCGACTAATAAACCATTCGTGTATGCCAAATTGCTATGCAAGGATTATGAGTGTAGGAGATGATGAAAGTCGGATTGTTCTGATTGCCAAGACCACTGTAGCTTCTGGCGAGGAGTTAACATATGATTACTTGTTTGATCCAGATGAGCCTGACGAATTCAAGGTGCCGTGTCTATGTAAATCCCCTAACTGCAGGAAATTCATGAATTAGAGAAAGTTTTATGTAGCTGCTC
|
Sequence Source |
Ensembl |
Orthology |
|
Created Date |
25-Jun-2016 |